FFCP PHASE1:Hg19::chr10:135139745..135139753,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50632 | |EntrezGene=50632 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17938 | |HGNC=17938 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=64bp_to_ENST00000467611_5end | |association_with_transcript=64bp_to_ENST00000467611_5end | ||
|cluster_id=chr10:135139745..135139753,- | |||
|coexpression_cluster_id=C2993 | |||
|description=CAGE_peak_4_at_CALY_5end | |description=CAGE_peak_4_at_CALY_5end | ||
|id=chr10:135139745..135139753,- | |id=chr10:135139745..135139753,- | ||
|ontology_enrichment_celltype=CL:0002322!2.57e-10!5 | |ontology_enrichment_celltype=CL:0002322!2.57e-10!5 | ||
|ontology_enrichment_celltype_v019=CL:0002553;1.72e-14;1!CL:0002581;1.72e-14;1!CL:0000333;1.21e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.23e-14,1;CL:0002581,2.11e-14,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.49e-19;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;7.42e-10;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,6.21e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.23e-20!94;UBERON:0001016!3.23e-20!94;UBERON:0005743!1.05e-18!86;UBERON:0001017!2.87e-17!82;UBERON:0001049!8.00e-15!57;UBERON:0005068!8.00e-15!57;UBERON:0006241!8.00e-15!57;UBERON:0007135!8.00e-15!57;UBERON:0000955!1.51e-13!69;UBERON:0006238!1.51e-13!69;UBERON:0002346!8.82e-13!90;UBERON:0003075!1.22e-12!86;UBERON:0007284!1.22e-12!86;UBERON:0002616!1.87e-11!59;UBERON:0001950!3.38e-11!20;UBERON:0002619!5.63e-10!22;UBERON:0007023!9.83e-10!115;UBERON:0003076!1.28e-09!15;UBERON:0003057!1.28e-09!15;UBERON:0000924!5.08e-09!173;UBERON:0006601!5.08e-09!173;UBERON:0004121!8.67e-09!169;UBERON:0000956!1.67e-08!25;UBERON:0000203!1.67e-08!25;UBERON:0001869!2.12e-08!32;UBERON:0002780!3.75e-08!41;UBERON:0001890!3.75e-08!41;UBERON:0006240!3.75e-08!41;UBERON:0003080!7.10e-08!42;UBERON:0000033!7.28e-08!123;UBERON:0001893!9.76e-08!34;UBERON:0002020!9.95e-08!34;UBERON:0003528!9.95e-08!34;UBERON:0003056!1.03e-07!61;UBERON:0004733!1.54e-07!12;UBERON:0002028!1.54e-07!12;UBERON:0007277!1.54e-07!12;UBERON:0000153!3.68e-07!129;UBERON:0007811!3.68e-07!129;UBERON:0001872!3.96e-07!5;UBERON:0002791!6.76e-07!33;UBERON:0004732!7.20e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.21e-11;5!UBERON:0002410;1.21e-11;5!UBERON:0002037;7.42e-10;6!UBERON:0005406;6.80e-08;2!UBERON:0002680;7.42e-07;9!UBERON:0000010;7.42e-07;8!UBERON:0001895;7.42e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,9.77e-12,5;UBERON:0002410,9.77e-12,5;UBERON:0002037,7.10e-10,6;UBERON:0006215,7.10e-10,6;UBERON:0005406,7.52e-08,2;UBERON:0000010,6.60e-07,8;UBERON:0002680,7.21e-07,9;UBERON:0001895,7.21e-07,9;UBERON:0010092,7.21e-07,9 | |||
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| ||
|short_description=p4@CALY | |short_description=p4@CALY | ||
}} | }} |
Latest revision as of 05:34, 17 September 2015
Short description: | p4@CALY |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CALY_5end |
Coexpression cluster: | C2993_Wilms_rhabdomyosarcoma_neuroblastoma_retinoblastoma_brain_cerebellum_teratocarcinoma |
Association with transcript: | 64bp_to_ENST00000467611_5end |
EntrezGene: | CALY |
HGNC: | 17938 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.23e-14 | 1 |
perirenal preadipocyte | 2.11e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 9.77e-12 | 5 |
autonomic nervous system | 9.77e-12 | 5 |
cerebellum | 7.10e-10 | 6 |
rhombic lip | 7.10e-10 | 6 |
perirenal fat | 7.52e-08 | 2 |
peripheral nervous system | 6.60e-07 | 8 |
regional part of metencephalon | 7.21e-07 | 9 |
metencephalon | 7.21e-07 | 9 |
future metencephalon | 7.21e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 6.21e-10 | 6 |