FFCP PHASE1:Hg19::chr5:176513895..176513924,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2264 | |EntrezGene=2264 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3691 | |HGNC=3691 | ||
|TSSclassifier=strong | |||
|UniProt=P22455,E7EWF4,D6RJD4,D6RG06,G3JVM2 | |UniProt=P22455,E7EWF4,D6RJD4,D6RG06,G3JVM2 | ||
|association_with_transcript=0bp_to_ENST00000292410,ENST00000393648,ENST00000502906,ENST00000503708,ENST00000507708,ENST00000510911,ENST00000514472,NM_002011,NM_213647,uc003mfl.2,uc003mfm.2,uc011dfu.1_5end | |association_with_transcript=0bp_to_ENST00000292410,ENST00000393648,ENST00000502906,ENST00000503708,ENST00000507708,ENST00000510911,ENST00000514472,NM_002011,NM_213647,uc003mfl.2,uc003mfm.2,uc011dfu.1_5end | ||
|cluster_id=chr5:176513895..176513924,+ | |||
|coexpression_cluster_id=C108 | |coexpression_cluster_id=C108 | ||
|description=CAGE_peak_1_at_FGFR4_5end | |description=CAGE_peak_1_at_FGFR4_5end | ||
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|ontology_enrichment_celltype=CL:0000066!4.15e-19!254;CL:1000497!3.60e-10!18;CL:0002518!3.60e-10!18;CL:1000449!1.64e-09!16;CL:1000507!5.08e-08!12;CL:1000494!5.08e-08!12;CL:0002681!1.04e-07!13;CL:0002584!1.04e-07!13 | |ontology_enrichment_celltype=CL:0000066!4.15e-19!254;CL:1000497!3.60e-10!18;CL:0002518!3.60e-10!18;CL:1000449!1.64e-09!16;CL:1000507!5.08e-08!12;CL:1000494!5.08e-08!12;CL:0002681!1.04e-07!13;CL:0002584!1.04e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:1000497;1.01e-12;17!CL:0002518;1.01e-12;17!CL:1000449;6.78e-12;15!CL:1000507;8.79e-10;10!CL:1000494;8.79e-10;10!CL:0002681;2.05e-09;12!CL:0002584;2.05e-09;12 | |ontology_enrichment_celltype_v019=CL:1000497;1.01e-12;17!CL:0002518;1.01e-12;17!CL:1000449;6.78e-12;15!CL:1000507;8.79e-10;10!CL:1000494;8.79e-10;10!CL:0002681;2.05e-09;12!CL:0002584;2.05e-09;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.41e-13,253;CL:1000497,9.33e-13,17;CL:0002518,9.33e-13,17;CL:1000449,7.57e-12,15;CL:1000507,8.60e-10,10;CL:1000494,8.60e-10,10;CL:0002681,2.32e-09,12;CL:0002584,2.32e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;2.67e-09;31!UBERON:0008947;4.31e-07;29 | |ontology_enrichment_development_v019=UBERON:0003104;2.67e-09;31!UBERON:0008947;4.31e-07;29 | ||
|ontology_enrichment_disease=DOID:305!9.45e-22!106;DOID:0050687!8.33e-21!143;DOID:162!1.16e-10!235;DOID:14566!1.74e-09!239;DOID:299!2.49e-08!25 | |ontology_enrichment_disease=DOID:305!9.45e-22!106;DOID:0050687!8.33e-21!143;DOID:162!1.16e-10!235;DOID:14566!1.74e-09!239;DOID:299!2.49e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:299;3.26e-07;25 | |ontology_enrichment_disease_v019=DOID:299;3.26e-07;25 | ||
|ontology_enrichment_disease_v019_2=DOID:305,3.93e-18,106;DOID:0050687,8.00e-17,143;DOID:299,3.67e-07,25;DOID:162,5.57e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0003104!3.98e-23!238;UBERON:0009142!3.98e-23!238;UBERON:0005177!1.71e-22!107;UBERON:0004921!2.21e-22!129;UBERON:0004185!2.21e-22!129;UBERON:0000481!7.72e-20!347;UBERON:0001007!1.50e-19!155;UBERON:0001555!1.50e-19!155;UBERON:0007026!1.50e-19!155;UBERON:0004119!4.93e-19!169;UBERON:0000925!4.93e-19!169;UBERON:0006595!4.93e-19!169;UBERON:0005172!2.24e-18!55;UBERON:0005173!2.24e-18!55;UBERON:0000077!4.08e-17!130;UBERON:0002100!5.07e-16!216;UBERON:0000466!8.20e-16!126;UBERON:0009569!7.57e-15!113;UBERON:0002417!2.23e-14!61;UBERON:0000916!2.23e-14!61;UBERON:0001041!4.45e-13!98;UBERON:0005256!3.11e-12!143;UBERON:0001008!4.65e-12!45;UBERON:0006554!1.07e-11!44;UBERON:0005911!6.90e-11!82;UBERON:0005409!9.39e-11!35;UBERON:0002113!2.66e-10!27;UBERON:0003918!2.66e-10!27;UBERON:0005095!2.66e-10!27;UBERON:0007687!2.66e-10!27;UBERON:0003064!5.49e-10!37;UBERON:0000464!6.34e-10!104;UBERON:0006555!6.91e-10!17;UBERON:0005103!6.91e-10!17;UBERON:0000083!6.91e-10!17;UBERON:0009201!6.91e-10!17;UBERON:0004819!6.91e-10!17;UBERON:0006553!6.91e-10!17;UBERON:0003074!6.91e-10!17;UBERON:0003060!6.91e-10!17;UBERON:0004211!1.64e-09!16;UBERON:0001285!1.64e-09!16;UBERON:0007684!1.64e-09!16;UBERON:0003220!1.64e-09!16;UBERON:0004208!1.64e-09!16;UBERON:0000489!2.18e-09!32;UBERON:0000119!2.42e-09!312;UBERON:0001048!3.09e-09!168;UBERON:0009497!3.49e-09!25;UBERON:0000015!3.49e-09!25;UBERON:0002423!3.49e-09!25;UBERON:0006235!3.49e-09!25;UBERON:0004161!3.49e-09!25;UBERON:0000483!4.80e-09!309;UBERON:0003929!5.76e-09!54;UBERON:0003887!7.19e-09!21;UBERON:0000080!8.27e-09!18;UBERON:0002120!8.27e-09!18;UBERON:0004875!8.27e-09!18;UBERON:0005721!8.27e-09!18;UBERON:0005754!8.27e-09!18;UBERON:0007297!8.27e-09!18;UBERON:0009856!9.08e-09!26;UBERON:0000475!1.22e-08!365;UBERON:0000160!1.23e-08!27;UBERON:0002107!1.50e-08!19;UBERON:0006925!1.50e-08!19;UBERON:0008836!1.50e-08!19;UBERON:0009854!1.60e-08!23;UBERON:0000922!1.96e-08!612;UBERON:0007499!2.85e-08!25;UBERON:0004876!4.01e-08!20;UBERON:0009773!5.08e-08!12;UBERON:0001231!5.08e-08!12;UBERON:0004810!5.08e-08!12;UBERON:0008835!5.11e-08!22;UBERON:0003894!5.11e-08!22;UBERON:0001225!1.04e-07!13;UBERON:0008987!1.04e-07!13;UBERON:0000468!1.61e-07!659;UBERON:0008947!2.06e-07!38;UBERON:0003258!2.06e-07!38;UBERON:0000058!3.18e-07!26;UBERON:0000059!4.02e-07!11;UBERON:0000062!5.09e-07!511;UBERON:0003103!5.22e-07!69;UBERON:0001851!5.59e-07!16;UBERON:0003886!5.79e-07!63 | |ontology_enrichment_uberon=UBERON:0003104!3.98e-23!238;UBERON:0009142!3.98e-23!238;UBERON:0005177!1.71e-22!107;UBERON:0004921!2.21e-22!129;UBERON:0004185!2.21e-22!129;UBERON:0000481!7.72e-20!347;UBERON:0001007!1.50e-19!155;UBERON:0001555!1.50e-19!155;UBERON:0007026!1.50e-19!155;UBERON:0004119!4.93e-19!169;UBERON:0000925!4.93e-19!169;UBERON:0006595!4.93e-19!169;UBERON:0005172!2.24e-18!55;UBERON:0005173!2.24e-18!55;UBERON:0000077!4.08e-17!130;UBERON:0002100!5.07e-16!216;UBERON:0000466!8.20e-16!126;UBERON:0009569!7.57e-15!113;UBERON:0002417!2.23e-14!61;UBERON:0000916!2.23e-14!61;UBERON:0001041!4.45e-13!98;UBERON:0005256!3.11e-12!143;UBERON:0001008!4.65e-12!45;UBERON:0006554!1.07e-11!44;UBERON:0005911!6.90e-11!82;UBERON:0005409!9.39e-11!35;UBERON:0002113!2.66e-10!27;UBERON:0003918!2.66e-10!27;UBERON:0005095!2.66e-10!27;UBERON:0007687!2.66e-10!27;UBERON:0003064!5.49e-10!37;UBERON:0000464!6.34e-10!104;UBERON:0006555!6.91e-10!17;UBERON:0005103!6.91e-10!17;UBERON:0000083!6.91e-10!17;UBERON:0009201!6.91e-10!17;UBERON:0004819!6.91e-10!17;UBERON:0006553!6.91e-10!17;UBERON:0003074!6.91e-10!17;UBERON:0003060!6.91e-10!17;UBERON:0004211!1.64e-09!16;UBERON:0001285!1.64e-09!16;UBERON:0007684!1.64e-09!16;UBERON:0003220!1.64e-09!16;UBERON:0004208!1.64e-09!16;UBERON:0000489!2.18e-09!32;UBERON:0000119!2.42e-09!312;UBERON:0001048!3.09e-09!168;UBERON:0009497!3.49e-09!25;UBERON:0000015!3.49e-09!25;UBERON:0002423!3.49e-09!25;UBERON:0006235!3.49e-09!25;UBERON:0004161!3.49e-09!25;UBERON:0000483!4.80e-09!309;UBERON:0003929!5.76e-09!54;UBERON:0003887!7.19e-09!21;UBERON:0000080!8.27e-09!18;UBERON:0002120!8.27e-09!18;UBERON:0004875!8.27e-09!18;UBERON:0005721!8.27e-09!18;UBERON:0005754!8.27e-09!18;UBERON:0007297!8.27e-09!18;UBERON:0009856!9.08e-09!26;UBERON:0000475!1.22e-08!365;UBERON:0000160!1.23e-08!27;UBERON:0002107!1.50e-08!19;UBERON:0006925!1.50e-08!19;UBERON:0008836!1.50e-08!19;UBERON:0009854!1.60e-08!23;UBERON:0000922!1.96e-08!612;UBERON:0007499!2.85e-08!25;UBERON:0004876!4.01e-08!20;UBERON:0009773!5.08e-08!12;UBERON:0001231!5.08e-08!12;UBERON:0004810!5.08e-08!12;UBERON:0008835!5.11e-08!22;UBERON:0003894!5.11e-08!22;UBERON:0001225!1.04e-07!13;UBERON:0008987!1.04e-07!13;UBERON:0000468!1.61e-07!659;UBERON:0008947!2.06e-07!38;UBERON:0003258!2.06e-07!38;UBERON:0000058!3.18e-07!26;UBERON:0000059!4.02e-07!11;UBERON:0000062!5.09e-07!511;UBERON:0003103!5.22e-07!69;UBERON:0001851!5.59e-07!16;UBERON:0003886!5.79e-07!63 | ||
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| ||
|short_description=p1@FGFR4 | |short_description=p1@FGFR4 | ||
}} | }} |
Latest revision as of 05:33, 17 September 2015
Short description: | p1@FGFR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FGFR4_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | 0bp_to_ENST00000292410, ENST00000393648, ENST00000502906, ENST00000503708, ENST00000507708, ENST00000510911, ENST00000514472, NM_002011, NM_213647, uc003mfl.2, uc003mfm.2, uc011dfu.1_5end |
EntrezGene: | FGFR4 |
HGNC: | 3691 |
UniProt: | P22455E7EWF4D6RJD4D6RG06G3JVM2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.41e-13 | 253 |
kidney cell | 9.33e-13 | 17 |
kidney epithelial cell | 9.33e-13 | 17 |
epithelial cell of nephron | 7.57e-12 | 15 |
kidney tubule cell | 8.60e-10 | 10 |
nephron tubule epithelial cell | 8.60e-10 | 10 |
kidney cortical cell | 2.32e-09 | 12 |
renal cortical epithelial cell | 2.32e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.93e-18 | 106 |
cell type cancer | 8.00e-17 | 143 |
adenocarcinoma | 3.67e-07 | 25 |
cancer | 5.57e-07 | 235 |