FFCP PHASE1:Hg19::chr7:150758349..150758368,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6522 | |EntrezGene=6522 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11028 | |HGNC=11028 | ||
|TSSclassifier=strong | |||
|UniProt=P04920 | |UniProt=P04920 | ||
|association_with_transcript=11bp_to_ENST00000310317_5end | |association_with_transcript=11bp_to_ENST00000310317_5end | ||
|cluster_id=chr7:150758349..150758368,+ | |||
|description=CAGE_peak_8_at_SLC4A2_5end | |description=CAGE_peak_8_at_SLC4A2_5end | ||
|id=chr7:150758349..150758368,+ | |id=chr7:150758349..150758368,+ | ||
|ontology_enrichment_celltype=CL:0000077!3.84e-12!19;CL:0000055!8.07e-08!180 | |ontology_enrichment_celltype=CL:0000077!3.84e-12!19;CL:0000055!8.07e-08!180 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.17e-17;19!CL:0002586;4.52e-11;3!CL:0000149;2.20e-08;4!CL:0002569;5.77e-08;6!CL:0000147;9.32e-08;14!CL:0002097;3.14e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,7.23e-18,19;CL:0002586,4.34e-11,3;CL:0000149,2.14e-08,4;CL:0002569,3.52e-08,6;CL:0000147,9.26e-08,14;CL:0002097,1.88e-07,2;CL:0000213,3.18e-07,58;CL:0000215,3.18e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;2.20e-11;5!UBERON:0005388;2.20e-11;5!UBERON:0001802;2.20e-11;5!UBERON:0001781;4.52e-11;3!UBERON:0001782;4.52e-11;3!UBERON:0003422;5.77e-08;6!UBERON:0002331;3.11e-07;10!UBERON:0003104;7.85e-07;7!UBERON:0009142;7.85e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,4.34e-11,3;UBERON:0005424,4.34e-11,3;UBERON:0000966,1.75e-09,6;UBERON:0005388,1.75e-09,6;UBERON:0001802,1.75e-09,6;UBERON:0001781,2.14e-08,4;UBERON:0003422,3.52e-08,6;UBERON:0002331,2.12e-07,10;UBERON:0000358,2.12e-07,10;UBERON:0000307,2.12e-07,10;UBERON:0000091,2.12e-07,10;UBERON:0000087,2.12e-07,10;UBERON:0007010,2.12e-07,10;UBERON:0007806,2.12e-07,10;UBERON:0008780,2.12e-07,10;UBERON:0005728,2.12e-07,10 | |||
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| ||
|short_description=p8@SLC4A2 | |short_description=p8@SLC4A2 | ||
}} | }} |
Latest revision as of 05:12, 17 September 2015
Short description: | p8@SLC4A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SLC4A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENST00000310317_5end |
EntrezGene: | SLC4A2 |
HGNC: | 11028 |
UniProt: | P04920 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 7.23e-18 | 19 |
retinal pigment epithelial cell | 4.34e-11 | 3 |
visual pigment cell | 2.14e-08 | 4 |
mesenchymal stem cell of umbilical cord | 3.52e-08 | 6 |
pigment cell | 9.26e-08 | 14 |
cortical cell of adrenal gland | 1.88e-07 | 2 |
lining cell | 3.18e-07 | 58 |
barrier cell | 3.18e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 4.34e-11 | 3 |
presumptive retinal pigmented epithelium | 4.34e-11 | 3 |
retina | 1.75e-09 | 6 |
photoreceptor array | 1.75e-09 | 6 |
posterior segment of eyeball | 1.75e-09 | 6 |
layer of retina | 2.14e-08 | 4 |
mesenchyme of umbilical cord | 3.52e-08 | 6 |
umbilical cord | 2.12e-07 | 10 |
blastocyst | 2.12e-07 | 10 |
blastula | 2.12e-07 | 10 |
bilaminar disc | 2.12e-07 | 10 |
inner cell mass | 2.12e-07 | 10 |
cleaving embryo | 2.12e-07 | 10 |
connecting stalk | 2.12e-07 | 10 |
inner cell mass derived epiblast | 2.12e-07 | 10 |
extraembryonic mesoderm | 2.12e-07 | 10 |