FFCP PHASE1:Hg19::chr16:57954541..57954548,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:57954541..57954548,- | |||
|coexpression_cluster_id=C406 | |||
|description=CAGE_peak_at_chr16:57954541..57954548,- | |description=CAGE_peak_at_chr16:57954541..57954548,- | ||
|id=chr16:57954541..57954548,- | |id=chr16:57954541..57954548,- | ||
|ontology_enrichment_celltype=CL:0002159!2.01e-39!13;CL:0002166!4.33e-33!3;CL:0002368!3.94e-20!13;CL:0002076!1.67e-18!43;CL:0002077!3.51e-15!33;CL:0002621!5.68e-15!3;CL:0000223!3.50e-13!59;CL:0000362!1.61e-12!8;CL:0000066!5.59e-11!254;CL:0000312!2.57e-09!5;CL:0000220!1.48e-08!246;CL:0002321!1.81e-08!248;CL:0000240!6.60e-08!6;CL:0000311!6.60e-08!6;CL:0000079!6.60e-08!6;CL:0000237!6.60e-08!6;CL:0000036!6.60e-08!6;CL:0000357!6.60e-08!6;CL:0000114!6.60e-08!6;CL:0000317!9.44e-07!2;CL:1000448!9.44e-07!2;CL:0002308!9.44e-07!2;CL:0002140!9.44e-07!2 | |ontology_enrichment_celltype=CL:0002159!2.01e-39!13;CL:0002166!4.33e-33!3;CL:0002368!3.94e-20!13;CL:0002076!1.67e-18!43;CL:0002077!3.51e-15!33;CL:0002621!5.68e-15!3;CL:0000223!3.50e-13!59;CL:0000362!1.61e-12!8;CL:0000066!5.59e-11!254;CL:0000312!2.57e-09!5;CL:0000220!1.48e-08!246;CL:0002321!1.81e-08!248;CL:0000240!6.60e-08!6;CL:0000311!6.60e-08!6;CL:0000079!6.60e-08!6;CL:0000237!6.60e-08!6;CL:0000036!6.60e-08!6;CL:0000357!6.60e-08!6;CL:0000114!6.60e-08!6;CL:0000317!9.44e-07!2;CL:1000448!9.44e-07!2;CL:0002308!9.44e-07!2;CL:0002140!9.44e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002166;7.79e-88;3!CL:0002159;4.85e-43;14!CL:0000317;5.96e-34;2!CL:1000448;5.96e-34;2!CL:0002308;5.96e-34;2!CL:0002140;5.96e-34;2!CL:0002077;8.74e-16;34!CL:0000622;1.71e-14;5!CL:0000154;2.59e-12;6!CL:0000150;1.16e-08;9!CL:0000362;1.16e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,9.74e-88,3;CL:0002159,4.85e-43,14;CL:0000317,5.04e-34,2;CL:1000448,5.04e-34,2;CL:0002308,5.04e-34,2;CL:0002140,5.04e-34,2;CL:0002077,1.78e-18,34;CL:0000622,1.60e-14,5;CL:0000154,2.45e-12,6;CL:0000221,4.40e-09,72;CL:0000150,1.12e-08,9;CL:0000362,1.12e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000221;7.40e-07;72 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001708!5.33e-25!4;UBERON:0001704!5.33e-25!4;UBERON:0002090!6.94e-17!6;UBERON:0001949!5.68e-15!3;UBERON:0001004!1.31e-10!72;UBERON:0003129!1.84e-09!11;UBERON:0000075!4.42e-08!13;UBERON:0005944!4.42e-08!13;UBERON:0004288!4.42e-08!13;UBERON:0003089!4.42e-08!13;UBERON:0001003!2.25e-07!14;UBERON:0007376!2.25e-07!14;UBERON:0007383!2.25e-07!14;UBERON:0007196!2.74e-07!14;UBERON:0001558!2.74e-07!14;UBERON:0003126!8.10e-07!7;UBERON:0001005!8.10e-07!7;UBERON:0002419!9.44e-07!2;UBERON:0007771!9.44e-07!2;UBERON:0003297!9.44e-07!2;UBERON:0001821!9.44e-07!2;UBERON:0003487!9.44e-07!2;UBERON:0001820!9.44e-07!2;UBERON:0005089!9.44e-07!2;UBERON:0005088!9.44e-07!2;UBERON:0000065!9.64e-07!53 | |ontology_enrichment_uberon=UBERON:0001708!5.33e-25!4;UBERON:0001704!5.33e-25!4;UBERON:0002090!6.94e-17!6;UBERON:0001949!5.68e-15!3;UBERON:0001004!1.31e-10!72;UBERON:0003129!1.84e-09!11;UBERON:0000075!4.42e-08!13;UBERON:0005944!4.42e-08!13;UBERON:0004288!4.42e-08!13;UBERON:0003089!4.42e-08!13;UBERON:0001003!2.25e-07!14;UBERON:0007376!2.25e-07!14;UBERON:0007383!2.25e-07!14;UBERON:0007196!2.74e-07!14;UBERON:0001558!2.74e-07!14;UBERON:0003126!8.10e-07!7;UBERON:0001005!8.10e-07!7;UBERON:0002419!9.44e-07!2;UBERON:0007771!9.44e-07!2;UBERON:0003297!9.44e-07!2;UBERON:0001821!9.44e-07!2;UBERON:0003487!9.44e-07!2;UBERON:0001820!9.44e-07!2;UBERON:0005089!9.44e-07!2;UBERON:0005088!9.44e-07!2;UBERON:0000065!9.64e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;2.83e-66;4!UBERON:0008895;2.83e-66;4!UBERON:0011159;2.51e-53;5!UBERON:0002419;5.96e-34;2!UBERON:0007771;5.96e-34;2!UBERON:0003297;5.96e-34;2!UBERON:0001821;5.96e-34;2!UBERON:0003487;5.96e-34;2!UBERON:0001820;5.96e-34;2!UBERON:0011137;5.16e-25;11!UBERON:0010323;5.16e-25;11!UBERON:0000075;1.33e-17;16!UBERON:0004765;2.70e-11;26!UBERON:0001434;2.73e-09;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,3.35e-66,4;UBERON:0008895,3.35e-66,4;UBERON:0011159,2.87e-53,5;UBERON:0010188,1.22e-44,6;UBERON:0002539,1.22e-44,6;UBERON:0008816,1.22e-44,6;UBERON:0002419,5.04e-34,2;UBERON:0007771,5.04e-34,2;UBERON:0003297,5.04e-34,2;UBERON:0001821,5.04e-34,2;UBERON:0003487,5.04e-34,2;UBERON:0001820,5.04e-34,2;UBERON:0005089,5.04e-34,2;UBERON:0005088,5.04e-34,2;UBERON:0010323,5.49e-25,11;UBERON:0011137,6.48e-20,14;UBERON:0000075,1.39e-17,16;UBERON:0008814,9.05e-16,18;UBERON:0003102,4.88e-07,99 | |||
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|short_description=p@chr16:57954541..57954548,- | |short_description=p@chr16:57954541..57954548,- | ||
}} | }} |
Latest revision as of 05:10, 17 September 2015
Short description: | p@chr16:57954541..57954548, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:57954541..57954548, - |
Coexpression cluster: | C406_Mallassezderived_Mesothelial_mesenchymal_chorionic_Gingival_Placental_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 9.74e-88 | 3 |
general ecto-epithelial cell | 4.85e-43 | 14 |
sebum secreting cell | 5.04e-34 | 2 |
epithelial cell of sweat gland | 5.04e-34 | 2 |
epithelial cell of skin gland | 5.04e-34 | 2 |
acinar cell of sebaceous gland | 5.04e-34 | 2 |
ecto-epithelial cell | 1.78e-18 | 34 |
acinar cell | 1.60e-14 | 5 |
protein secreting cell | 2.45e-12 | 6 |
ectodermal cell | 4.40e-09 | 72 |
glandular epithelial cell | 1.12e-08 | 9 |
epidermal cell | 1.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 3.35e-66 | 4 |
splanchnocranium | 3.35e-66 | 4 |
primary subdivision of cranial skeletal system | 2.87e-53 | 5 |
protuberance | 1.22e-44 | 6 |
pharyngeal arch | 1.22e-44 | 6 |
embryonic head | 1.22e-44 | 6 |
skin gland | 5.04e-34 | 2 |
epidermis gland | 5.04e-34 | 2 |
gland of integumental system | 5.04e-34 | 2 |
sebaceous gland | 5.04e-34 | 2 |
skin sebaceous gland | 5.04e-34 | 2 |
sweat gland | 5.04e-34 | 2 |
sweat gland placode | 5.04e-34 | 2 |
sebaceous gland placode | 5.04e-34 | 2 |
cranial skeletal system | 5.49e-25 | 11 |
axial skeletal system | 6.48e-20 | 14 |
subdivision of skeletal system | 1.39e-17 | 16 |
pharyngeal arch system | 9.05e-16 | 18 |
surface structure | 4.88e-07 | 99 |