FFCP PHASE1:Hg19::chr9:33817736..33817749,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:33817736..33817749,+ to FFCP PHASE1:Hg19::chr9:33817736..33817749,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54926 | |EntrezGene=54926 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19907 | |HGNC=19907 | ||
|TSSclassifier=strong | |||
|UniProt=Q712K3 | |UniProt=Q712K3 | ||
|association_with_transcript=171bp_to_ENST00000263228_5end | |||
|cluster_id=chr9:33817736..33817749,+ | |||
|description=CAGE_peak_5_at_UBE2R2_5end | |||
|id=chr9:33817736..33817749,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.15e-13!42;CL:0000766!7.68e-13!76;CL:0000860!2.62e-11!45;CL:0002194!3.20e-10!63;CL:0000576!3.20e-10!63;CL:0000040!3.20e-10!63;CL:0000559!3.20e-10!63;CL:0000839!2.63e-09!70;CL:0002009!4.40e-09!65;CL:0000557!1.59e-08!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.82e-11;33!CL:0002057;3.82e-11;33!CL:0000473;7.06e-10;39!CL:0000234;7.06e-10;39!CL:0000576;6.06e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.17e-14,72;CL:0000860,7.75e-14,42;CL:0002057,7.75e-14,42;CL:0000473,8.20e-14,48;CL:0000234,8.20e-14,48;CL:0002194,2.27e-11,59;CL:0000576,2.27e-11,59;CL:0000040,2.27e-11,59;CL:0000559,2.27e-11,59;CL:0000839,1.95e-10,66;CL:0002009,2.88e-10,61;CL:0000557,6.10e-10,67 | |||
|ontology_enrichment_development_v019=CL:0002057;1.58e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.50e-17!659;UBERON:0000926!2.33e-15!448;UBERON:0004120!2.33e-15!448;UBERON:0006603!2.33e-15!448;UBERON:0000480!3.78e-15!626;UBERON:0000467!5.57e-15!625;UBERON:0002050!1.20e-12!605;UBERON:0005423!1.20e-12!605;UBERON:0003081!1.92e-12!216;UBERON:0000923!2.31e-12!604;UBERON:0005291!2.31e-12!604;UBERON:0006598!2.31e-12!604;UBERON:0002532!2.31e-12!604;UBERON:0000922!3.14e-12!612;UBERON:0002193!7.51e-09!112;UBERON:0002390!8.31e-09!102;UBERON:0003061!8.31e-09!102;UBERON:0000062!2.17e-08!511;UBERON:0002204!4.69e-08!167;UBERON:0002371!4.89e-08!80;UBERON:0004765!1.83e-07!101;UBERON:0001434!1.83e-07!101;UBERON:0001474!2.30e-07!86;UBERON:0002405!3.36e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,3.14e-14,315;UBERON:0004120,3.14e-14,315;UBERON:0006603,3.14e-14,315;UBERON:0003081,5.17e-13,203;UBERON:0002050,2.64e-11,564;UBERON:0000923,4.93e-11,560;UBERON:0010316,4.93e-11,560;UBERON:0005291,4.93e-11,560;UBERON:0006598,4.93e-11,560;UBERON:0010317,4.93e-11,560;UBERON:0002532,4.93e-11,560;UBERON:0005423,2.48e-10,581;UBERON:0002390,3.82e-10,98;UBERON:0003061,3.82e-10,98;UBERON:0002193,3.85e-10,108;UBERON:0002371,2.02e-09,76;UBERON:0002405,4.32e-09,93;UBERON:0000922,5.26e-09,592;UBERON:0001474,1.57e-08,82;UBERON:0002204,1.67e-08,167;UBERON:0004765,2.42e-08,90;UBERON:0001434,5.12e-08,100 | |||
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| ||
|short_description=p5@UBE2R2 | |||
}} | }} |
Latest revision as of 04:38, 17 September 2015
Short description: | p5@UBE2R2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_UBE2R2_5end |
Coexpression cluster: | NA |
Association with transcript: | 171bp_to_ENST00000263228_5end |
EntrezGene: | UBE2R2 |
HGNC: | 19907 |
UniProt: | Q712K3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.17e-14 | 72 |
classical monocyte | 7.75e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.75e-14 | 42 |
defensive cell | 8.20e-14 | 48 |
phagocyte | 8.20e-14 | 48 |
monopoietic cell | 2.27e-11 | 59 |
monocyte | 2.27e-11 | 59 |
monoblast | 2.27e-11 | 59 |
promonocyte | 2.27e-11 | 59 |
myeloid lineage restricted progenitor cell | 1.95e-10 | 66 |
macrophage dendritic cell progenitor | 2.88e-10 | 61 |
granulocyte monocyte progenitor cell | 6.10e-10 | 67 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 3.14e-14 | 315 |
mesoderm-derived structure | 3.14e-14 | 315 |
presumptive mesoderm | 3.14e-14 | 315 |
lateral plate mesoderm | 5.17e-13 | 203 |
embryonic structure | 2.64e-11 | 564 |
germ layer | 4.93e-11 | 560 |
germ layer / neural crest | 4.93e-11 | 560 |
embryonic tissue | 4.93e-11 | 560 |
presumptive structure | 4.93e-11 | 560 |
germ layer / neural crest derived structure | 4.93e-11 | 560 |
epiblast (generic) | 4.93e-11 | 560 |
developing anatomical structure | 2.48e-10 | 581 |
hematopoietic system | 3.82e-10 | 98 |
blood island | 3.82e-10 | 98 |
hemolymphoid system | 3.85e-10 | 108 |
bone marrow | 2.02e-09 | 76 |
immune system | 4.32e-09 | 93 |
embryo | 5.26e-09 | 592 |
bone element | 1.57e-08 | 82 |
musculoskeletal system | 1.67e-08 | 167 |
skeletal element | 2.42e-08 | 90 |
skeletal system | 5.12e-08 | 100 |