FFCP PHASE1:Hg19::chr1:153085984..153085999,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:153085984..153085999,-
|short_description=p1@SPRR2F,p2@SPRR2A
|description=CAGE_peak_1_at_SPRR2F_5end,CAGE_peak_2_at_SPRR2A_5end
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6705,6700 | |EntrezGene=6705,6700 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11266,11261 | |HGNC=11266,11261 | ||
|TSSclassifier=strong | |||
|UniProt=Q96RM1 | |UniProt=Q96RM1 | ||
|association_with_transcript=0bp_to_ENST00000468739,NM_001014450,uc001fbi.2,uc009woa.2_5end | |||
|cluster_id=chr1:153085984..153085999,- | |||
|coexpression_cluster_id=C197 | |||
|description=CAGE_peak_1_at_SPRR2F_5end,CAGE_peak_2_at_SPRR2A_5end | |||
|id=chr1:153085984..153085999,- | |||
|ontology_enrichment_celltype=CL:0002159!2.56e-18!13;CL:0002076!1.07e-17!43;CL:0002368!4.79e-14!13;CL:0000622!1.14e-12!5;CL:0000223!1.87e-11!59;CL:0000154!1.74e-10!6;CL:0002251!9.48e-10!21;CL:0002621!7.30e-09!3;CL:0002166!9.20e-09!3;CL:0000068!2.12e-08!3;CL:0000069!2.12e-08!3;CL:0000307!2.12e-08!3;CL:0000377!2.12e-08!3;CL:0002623!6.23e-08!3;CL:0000362!8.25e-08!8;CL:0002077!3.16e-07!33;CL:0002202!6.58e-07!9;CL:0002632!6.58e-07!9;CL:0000066!7.45e-07!254;CL:0000150!7.67e-07!9;CL:0000240!8.13e-07!6;CL:0000311!8.13e-07!6;CL:0000079!8.13e-07!6;CL:0000237!8.13e-07!6;CL:0000036!8.13e-07!6;CL:0000357!8.13e-07!6;CL:0000114!8.13e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002159;7.25e-22;14!CL:0002621;5.01e-20;3!CL:0000317;7.07e-14;2!CL:1000448;7.07e-14;2!CL:0002308;7.07e-14;2!CL:0002140;7.07e-14;2!CL:0000575;8.88e-14;2!CL:0000622;2.61e-12;5!CL:0000154;2.42e-10;6!CL:0002077;3.79e-10;34!CL:0002166;7.31e-10;3!CL:0000307;2.51e-09;3!CL:1001319;1.07e-07;1!CL:1000600;1.07e-07;1!CL:0000150;4.80e-07;9!CL:0000362;5.61e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,7.37e-22,14;CL:0002621,4.70e-20,3;CL:0000317,7.55e-14,2;CL:1000448,7.55e-14,2;CL:0002308,7.55e-14,2;CL:0002140,7.55e-14,2;CL:0000575,8.60e-14,2;CL:0000622,2.71e-12,5;CL:0002077,4.55e-11,34;CL:0000154,2.50e-10,6;CL:0002166,7.47e-10,3;CL:0000068,2.97e-09,3;CL:0000069,2.97e-09,3;CL:0000307,2.97e-09,3;CL:0000377,2.97e-09,3;CL:1001319,9.72e-08,1;CL:1000600,9.72e-08,1;CL:0000150,4.90e-07,9;CL:0000362,5.67e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;2.51e-09;3!UBERON:0009143;2.89e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!2.49e-16!72;UBERON:0000166!1.44e-12!21;UBERON:0004119!2.06e-11!169;UBERON:0000925!2.06e-11!169;UBERON:0006595!2.06e-11!169;UBERON:0000161!7.81e-11!35;UBERON:0000165!1.47e-10!28;UBERON:0000930!1.47e-10!28;UBERON:0000065!2.59e-09!53;UBERON:0001007!4.47e-09!155;UBERON:0001555!4.47e-09!155;UBERON:0007026!4.47e-09!155;UBERON:0003126!4.75e-09!7;UBERON:0001005!4.75e-09!7;UBERON:0003102!6.90e-09!95;UBERON:0001949!7.30e-09!3;UBERON:0000464!1.01e-08!104;UBERON:0007196!5.08e-08!14;UBERON:0001558!5.08e-08!14;UBERON:0005181!1.23e-07!35;UBERON:0001444!3.40e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;5.01e-20;3!UBERON:0002419;7.07e-14;2!UBERON:0007771;7.07e-14;2!UBERON:0003297;7.07e-14;2!UBERON:0001821;7.07e-14;2!UBERON:0003487;7.07e-14;2!UBERON:0001820;7.07e-14;2!UBERON:0003350;4.19e-13;8!UBERON:0000165;8.76e-11;28!UBERON:0001723;4.80e-10;3!UBERON:0001033;4.80e-10;3!UBERON:0003929;6.93e-09;7!UBERON:0003126;7.72e-09;7!UBERON:0001005;7.72e-09;7!UBERON:0000486;8.79e-09;12!UBERON:0000161;1.72e-08;19!UBERON:0000166;1.72e-08;19!UBERON:0002372;3.10e-08;1!UBERON:0001961;3.10e-08;1!UBERON:0001744;3.10e-08;1!UBERON:0001042;3.10e-08;1!UBERON:0001735;3.10e-08;1!UBERON:0000344;5.52e-08;20!UBERON:0001828;7.85e-08;8!UBERON:0004645;1.07e-07;1!UBERON:0001256;1.07e-07;1!UBERON:0001259;1.07e-07;1!UBERON:0001708;1.33e-07;4!UBERON:0008895;1.33e-07;4!UBERON:0001301;1.59e-07;1!UBERON:0002426;1.59e-07;1!UBERON:0003831;1.59e-07;1!UBERON:0003898;1.59e-07;1!UBERON:0004830;1.59e-07;1!UBERON:0003830;1.59e-07;1!UBERON:0005175;1.59e-07;1!UBERON:0001774;1.59e-07;1!UBERON:0001103;1.59e-07;1!UBERON:0000964;2.54e-07;4!UBERON:0010409;2.54e-07;4!UBERON:0010371;5.00e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,4.70e-20,3;UBERON:0000166,5.72e-14,22;UBERON:0002419,7.55e-14,2;UBERON:0007771,7.55e-14,2;UBERON:0003297,7.55e-14,2;UBERON:0001821,7.55e-14,2;UBERON:0003487,7.55e-14,2;UBERON:0001820,7.55e-14,2;UBERON:0005089,7.55e-14,2;UBERON:0005088,7.55e-14,2;UBERON:0003350,3.87e-13,8;UBERON:0000153,6.01e-13,62;UBERON:0007811,6.01e-13,62;UBERON:0000033,3.26e-12,56;UBERON:0003102,7.89e-12,99;UBERON:0000161,1.34e-10,36;UBERON:0000165,2.18e-10,29;UBERON:0000930,2.18e-10,29;UBERON:0001004,2.18e-10,74;UBERON:0001723,4.80e-10,3;UBERON:0001033,4.80e-10,3;UBERON:0010056,4.80e-10,3;UBERON:0001444,1.98e-09,49;UBERON:0003126,8.61e-09,7;UBERON:0001005,8.61e-09,7;UBERON:0002372,3.10e-08,1;UBERON:0001961,3.10e-08,1;UBERON:0001744,3.10e-08,1;UBERON:0001735,3.10e-08,1;UBERON:0000344,5.32e-08,20;UBERON:0001828,7.67e-08,8;UBERON:0004645,9.72e-08,1;UBERON:0001256,9.72e-08,1;UBERON:0001259,9.72e-08,1;UBERON:0002426,1.35e-07,1;UBERON:0003831,1.35e-07,1;UBERON:0003898,1.35e-07,1;UBERON:0004830,1.35e-07,1;UBERON:0003830,1.35e-07,1;UBERON:0005175,1.35e-07,1;UBERON:0001774,1.35e-07,1;UBERON:0001103,1.35e-07,1;UBERON:0010084,1.35e-07,1;UBERON:0001708,1.35e-07,4;UBERON:0008895,1.35e-07,4;UBERON:0001301,1.87e-07,1;UBERON:0000964,2.50e-07,4;UBERON:0010409,2.50e-07,4;UBERON:0004348,2.50e-07,4;UBERON:0005427,2.50e-07,4 | |||
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| ||
|short_description=p1@SPRR2F,p2@SPRR2A | |||
}} | }} |
Latest revision as of 04:35, 17 September 2015
Short description: | p1@SPRR2F, p2@SPRR2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPRR2F_5end, CAGE_peak_2_at_SPRR2A_5end |
Coexpression cluster: | C197_tongue_esophagus_tonsil_salivary_cervix_nasal_Gingival |
Association with transcript: | 0bp_to_ENST00000468739, NM_001014450, uc001fbi.2, uc009woa.2_5end |
EntrezGene: | 6705,6700 |
HGNC: | 11261&submit=Submit 11266, 11261 |
UniProt: | Q96RM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 7.37e-22 | 14 |
gingival epithelial cell | 4.70e-20 | 3 |
sebum secreting cell | 7.55e-14 | 2 |
epithelial cell of sweat gland | 7.55e-14 | 2 |
epithelial cell of skin gland | 7.55e-14 | 2 |
acinar cell of sebaceous gland | 7.55e-14 | 2 |
corneal epithelial cell | 8.60e-14 | 2 |
acinar cell | 2.71e-12 | 5 |
ecto-epithelial cell | 4.55e-11 | 34 |
protein secreting cell | 2.50e-10 | 6 |
epithelial cell of Malassez | 7.47e-10 | 3 |
duct epithelial cell | 2.97e-09 | 3 |
branched duct epithelial cell | 2.97e-09 | 3 |
tracheal epithelial cell | 2.97e-09 | 3 |
tracheoblast | 2.97e-09 | 3 |
bladder cell | 9.72e-08 | 1 |
lower urinary tract cell | 9.72e-08 | 1 |
glandular epithelial cell | 4.90e-07 | 9 |
epidermal cell | 5.67e-07 | 9 |