FFCP PHASE1:Hg19::chr1:26324534..26324589,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:26324534..26324589,-
|short_description=p1@PAFAH2
|description=CAGE_peak_1_at_PAFAH2_5end
|association_with_transcript=0bp_to_ENST00000374284,ENST000004414...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5051 | |EntrezGene=5051 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8579 | |HGNC=8579 | ||
|TSSclassifier=strong | |||
|UniProt=Q99487,Q5SY01 | |UniProt=Q99487,Q5SY01 | ||
|association_with_transcript=0bp_to_ENST00000374284,ENST00000441420,ENST00000493892_5end | |||
|cluster_id=chr1:26324534..26324589,- | |||
|description=CAGE_peak_1_at_PAFAH2_5end | |||
|id=chr1:26324534..26324589,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.76e-15!115;UBERON:0000475!5.84e-14!365;UBERON:0000481!6.35e-11!347;UBERON:0000153!9.48e-11!129;UBERON:0007811!9.48e-11!129;UBERON:0000033!1.18e-10!123;UBERON:0000119!3.56e-10!312;UBERON:0000062!3.75e-10!511;UBERON:0000483!1.10e-09!309;UBERON:0000064!2.44e-09!219;UBERON:0000480!4.21e-09!626;UBERON:0000467!4.79e-09!625;UBERON:0001049!4.93e-09!57;UBERON:0005068!4.93e-09!57;UBERON:0006241!4.93e-09!57;UBERON:0007135!4.93e-09!57;UBERON:0000468!5.96e-09!659;UBERON:0003075!7.23e-09!86;UBERON:0007284!7.23e-09!86;UBERON:0004121!9.89e-09!169;UBERON:0004119!2.47e-08!169;UBERON:0000925!2.47e-08!169;UBERON:0006595!2.47e-08!169;UBERON:0002616!2.82e-08!59;UBERON:0000924!1.14e-07!173;UBERON:0006601!1.14e-07!173;UBERON:0003056!2.03e-07!61;UBERON:0002346!2.30e-07!90;UBERON:0000477!5.38e-07!286;UBERON:0004111!8.34e-07!241 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.74e-15,114;UBERON:0010371,7.89e-12,104;UBERON:0000119,2.05e-10,309;UBERON:0000483,6.40e-10,306;UBERON:0003075,1.56e-09,82;UBERON:0007284,1.56e-09,82;UBERON:0004119,1.65e-09,160;UBERON:0000925,1.65e-09,160;UBERON:0006595,1.65e-09,160;UBERON:0011216,3.34e-09,223;UBERON:0001049,8.21e-09,56;UBERON:0005068,8.21e-09,56;UBERON:0006241,8.21e-09,56;UBERON:0007135,8.21e-09,56;UBERON:0000073,3.43e-08,53;UBERON:0002616,3.43e-08,53;UBERON:0002346,6.56e-08,86;UBERON:0004121,1.01e-07,171;UBERON:0000924,1.01e-07,171;UBERON:0006601,1.01e-07,171;UBERON:0001007,5.33e-07,145;UBERON:0001555,5.33e-07,145;UBERON:0007026,5.33e-07,145;UBERON:0003056,9.77e-07,61 | |||
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| ||
|short_description=p1@PAFAH2 | |||
}} | }} |
Latest revision as of 04:32, 17 September 2015
Short description: | p1@PAFAH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PAFAH2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000374284, ENST00000441420, ENST00000493892_5end |
EntrezGene: | PAFAH2 |
HGNC: | 8579 |
UniProt: | Q99487Q5SY01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 6.74e-15 | 114 |
ecto-epithelium | 7.89e-12 | 104 |
cell layer | 2.05e-10 | 309 |
epithelium | 6.40e-10 | 306 |
neural plate | 1.56e-09 | 82 |
presumptive neural plate | 1.56e-09 | 82 |
endoderm-derived structure | 1.65e-09 | 160 |
endoderm | 1.65e-09 | 160 |
presumptive endoderm | 1.65e-09 | 160 |
organ system subdivision | 3.34e-09 | 223 |
neural tube | 8.21e-09 | 56 |
neural rod | 8.21e-09 | 56 |
future spinal cord | 8.21e-09 | 56 |
neural keel | 8.21e-09 | 56 |
regional part of nervous system | 3.43e-08 | 53 |
regional part of brain | 3.43e-08 | 53 |
neurectoderm | 6.56e-08 | 86 |
ectoderm-derived structure | 1.01e-07 | 171 |
ectoderm | 1.01e-07 | 171 |
presumptive ectoderm | 1.01e-07 | 171 |
digestive system | 5.33e-07 | 145 |
digestive tract | 5.33e-07 | 145 |
primitive gut | 5.33e-07 | 145 |
pre-chordal neural plate | 9.77e-07 | 61 |