FFCP PHASE1:Hg19::chr1:153013588..153013605,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6703 | |EntrezGene=6703 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11264 | |HGNC=11264 | ||
|TSSclassifier=strong | |||
|UniProt=P22532 | |UniProt=P22532 | ||
|association_with_transcript=0bp_to_ENST00000360379,NM_006945,uc001fbb.2_5end | |association_with_transcript=0bp_to_ENST00000360379,NM_006945,uc001fbb.2_5end | ||
|cluster_id=chr1:153013588..153013605,- | |||
|coexpression_cluster_id=C197 | |||
|description=CAGE_peak_1_at_SPRR2D_5end | |description=CAGE_peak_1_at_SPRR2D_5end | ||
|id=chr1:153013588..153013605,- | |id=chr1:153013588..153013605,- | ||
|ontology_enrichment_celltype=CL:0002076!3.60e-19!43;CL:0000223!3.63e-13!59;CL:0002251!7.12e-12!21;CL:0002368!3.11e-11!13;CL:0002159!3.53e-10!13;CL:0000066!8.76e-10!254;CL:0000622!5.97e-08!5;CL:0002202!9.25e-07!9;CL:0002632!9.25e-07!9 | |ontology_enrichment_celltype=CL:0002076!3.60e-19!43;CL:0000223!3.63e-13!59;CL:0002251!7.12e-12!21;CL:0002368!3.11e-11!13;CL:0002159!3.53e-10!13;CL:0000066!8.76e-10!254;CL:0000622!5.97e-08!5;CL:0002202!9.25e-07!9;CL:0002632!9.25e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.35e-15;42!CL:0002368;1.82e-15;13!CL:0002159;3.70e-15;14!CL:0000622;5.08e-12;5!CL:0002251;6.59e-11;20!CL:0000154;6.36e-10;6!CL:0000244;7.45e-09;4!CL:0000731;7.45e-09;4!CL:0002077;1.68e-08;34!CL:0002202;2.10e-08;9!CL:0002632;2.10e-08;9!CL:0002621;4.20e-08;3!CL:0002623;1.14e-07;3!CL:0002166;1.26e-07;3!CL:0002328;2.33e-07;3!CL:0000307;2.44e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.50e-19,42;CL:0002368,1.89e-15,13;CL:0002159,3.70e-15,14;CL:0000066,8.50e-13,253;CL:0000223,1.93e-12,58;CL:0000622,5.03e-12,5;CL:0002251,6.15e-11,20;CL:0000154,6.30e-10,6;CL:0002077,6.41e-10,34;CL:0000244,7.45e-09,4;CL:0000731,7.45e-09,4;CL:0002202,2.13e-08,9;CL:0002632,2.13e-08,9;CL:0002621,4.20e-08,3;CL:0002623,1.13e-07,3;CL:0002166,1.24e-07,3;CL:0002328,2.39e-07,3;CL:0000068,2.44e-07,3;CL:0000069,2.44e-07,3;CL:0000307,2.44e-07,3;CL:0000377,2.44e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;2.44e-07;3!CL:0000223;7.99e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!1.85e-10!14 | |ontology_enrichment_disease=DOID:1749!1.85e-10!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!8.79e-12!169;UBERON:0000925!8.79e-12!169;UBERON:0006595!8.79e-12!169;UBERON:0001004!1.90e-10!72;UBERON:0000166!5.48e-10!21;UBERON:0000165!1.27e-07!28;UBERON:0000930!1.27e-07!28;UBERON:0005910!1.46e-07!6;UBERON:0001007!2.37e-07!155;UBERON:0001555!2.37e-07!155;UBERON:0007026!2.37e-07!155;UBERON:0000365!4.07e-07!5;UBERON:0003102!4.48e-07!95;UBERON:0000161!5.11e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;8.10e-11;12!UBERON:0000165;1.06e-10;28!UBERON:0000365;1.16e-10;5!UBERON:0000161;8.45e-10;19!UBERON:0000166;8.45e-10;19!UBERON:0005910;8.23e-09;6!UBERON:0001949;4.20e-08;3!UBERON:0004815;2.33e-07;3!UBERON:0002031;2.33e-07;3!UBERON:0000344;2.37e-07;20!UBERON:0001041;8.52e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,2.27e-12,22;UBERON:0004119,2.09e-11,160;UBERON:0000925,2.09e-11,160;UBERON:0006595,2.09e-11,160;UBERON:0003102,3.72e-11,99;UBERON:0001004,6.92e-11,74;UBERON:0000365,1.15e-10,5;UBERON:0000165,2.97e-10,29;UBERON:0000930,2.97e-10,29;UBERON:0000153,2.50e-09,62;UBERON:0007811,2.50e-09,62;UBERON:0000161,5.32e-09,36;UBERON:0005910,8.17e-09,6;UBERON:0000033,1.49e-08,56;UBERON:0001949,4.20e-08,3;UBERON:0000344,2.20e-07,20;UBERON:0004815,2.39e-07,3;UBERON:0002031,2.39e-07,3;UBERON:0008814,7.08e-07,18;UBERON:0001444,8.15e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.236132343941038,0,0,0,46.8904824484253,23.7952675834818,21.0759785795069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03423704220986,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,208.376904903334,131.628477188472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.3686085549842,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,1.71141546463335,0,0.117434498643765,0.323745888736263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,245.441283517387,421.938248554021,107.264918675487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,128.846835069726,249.531892231915,10.5555421032212,19.4435734832912,0,0,0,0,0,0,0,0,0,0,0,0,0,120.916645842942,5.37542810236351,265.54475713499,0.716468181622786,1.74380363108377,0.766765358330422,0,0,0,0,0,1.52394946301206,0,0,8.55362230113526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12189300012382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.1602020543457,0,0,0.262248829918848,2.25599806453706,0.462092022626489,0,0,0,0,0,0,0,0,0,4.33289664176565,8.31076008928724,0,0,0,0,0,0,0,0,0,175.150989088833,428.389702138067,0,0,0,0,0,0,0,0.0852266274161009,0,144.954870771578,35.7473525299097,5.10450849978336,105.204092089772,0,0,0,0.616067160352178,3.72614221221915,0.869932992075073,0.55597265731176,0.143124886741991,0,0,0,0,0,0,0,0,0,0,3.43710218674637,0,0,0,0,0,0,0,0,0,82.9298719051525,70.5905925258558,0,0,0.202910376962704,2.16876448669825,0,0,0,0,0,0,0,0,0,66.4894798933288,8.71392958196524,27.2227462153306,0,5.16606447205476,20.2165770801151,24.8320885980538,6.66197860600182,0,0,0,0,0,0,0,0,0,0,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.83354593529453,0,1.84296421259539,0,0,0.556543525114529,0.16480387422676,0,0.996239941255349,0,0,0.102268682502155,0,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0,0,0.682760689712998,0,0,0,0,0,0,0,0,0,0,0,0,63.2983799024859,172.214678531498,0.113942055847001,0.69169171316418,0.179515288819544,0.217294743844016,2.55200927785536,0,0,0,0,0,0.902382642468723,1.37243774022418,1.1747511088309,0.189753732724185,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0,0,0,0,0.782658475728359,0,0,0,0,0,0,0,0.664653872707185,0,0.627865836814451,2.38944859545918,0,0.554698692052555,0,22.83222859755,0.69647365264322,0.17472666824203,0,0,0,0,511.908029025878,0,0,1.09633539717401,0.596143835108969,0,1.56441106187842,1.84365286578528,0.213452994739353,0.19980960958213,0.144090417154106,0.114536596165916,0,29.9633979815351,0,1.88555227693436,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0,0.199679000498991,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,4.94942561413301,3.0952078182318,0,131.825832226512,0.236417121897595,0,0.211200673038813,0,0.767660789277781,0,0,0,0,0,0,0,2.13440553948281,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,84.8993872834342,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0.454947352624943,2.85465333544967,0,0,0,0,0,0,0,0,0,0.457680136793847,0,0,0,0,3.14862178514523,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.398594520940089,0,0,0,50.0809732359946,0,0,0,0,0.184105950251841,517.274419546506,49.1441035426049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687034029507179,1.88751557356385,1.65085738669511,0.115525666150338,0,0.690359926060101,0,0,0.40341013740704,0,0,4.25806985526251,0,0,0,0,0,0,0,7.44316767583941,0.175871244359621,0.766574565837572,0,0,0.606965604236632,0,0.266107110487916,0.230467975111559,0,0,0,0,0,0,0,9.24898138935504,0,0,0,0,0,0,0,0,25.2803720278905,27.314956335032,391.94422824859,3.44181887056222,0.118332000730565,0.0852134047591577,0,0.22910686854405,0,0,0,1.3741032706134,0,0,0.102662806856247,0,21.3712836946021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99882311849858,3.57107877211315,913.644822871926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,78.8965733033629,0,0.968833647540092,2.42091385753846,191.633353150268,0,0,2093.99968127297,1230.67095070267,396.83829636195,67.2037064529377,0.332660356546013,10.5824249194267,0.106727345877715,0,0,2.34640942403454,3.05603610457166,16.2758471326295,0,0.201273793591026,2.24397944612263 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| ||
|short_description=p1@SPRR2D | |short_description=p1@SPRR2D | ||
}} | }} |
Latest revision as of 04:31, 17 September 2015
Short description: | p1@SPRR2D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPRR2D_5end |
Coexpression cluster: | C197_tongue_esophagus_tonsil_salivary_cervix_nasal_Gingival |
Association with transcript: | 0bp_to_ENST00000360379, NM_006945, uc001fbb.2_5end |
EntrezGene: | SPRR2D |
HGNC: | 11264 |
UniProt: | P22532 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.50e-19 | 42 |
respiratory epithelial cell | 1.89e-15 | 13 |
general ecto-epithelial cell | 3.70e-15 | 14 |
epithelial cell | 8.50e-13 | 253 |
endodermal cell | 1.93e-12 | 58 |
acinar cell | 5.03e-12 | 5 |
epithelial cell of alimentary canal | 6.15e-11 | 20 |
protein secreting cell | 6.30e-10 | 6 |
ecto-epithelial cell | 6.41e-10 | 34 |
transitional epithelial cell | 7.45e-09 | 4 |
urothelial cell | 7.45e-09 | 4 |
epithelial cell of tracheobronchial tree | 2.13e-08 | 9 |
epithelial cell of lower respiratory tract | 2.13e-08 | 9 |
gingival epithelial cell | 4.20e-08 | 3 |
acinar cell of salivary gland | 1.13e-07 | 3 |
epithelial cell of Malassez | 1.24e-07 | 3 |
bronchial epithelial cell | 2.39e-07 | 3 |
duct epithelial cell | 2.44e-07 | 3 |
branched duct epithelial cell | 2.44e-07 | 3 |
tracheal epithelial cell | 2.44e-07 | 3 |
tracheoblast | 2.44e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
oral opening | 2.27e-12 | 22 |
endoderm-derived structure | 2.09e-11 | 160 |
endoderm | 2.09e-11 | 160 |
presumptive endoderm | 2.09e-11 | 160 |
surface structure | 3.72e-11 | 99 |
respiratory system | 6.92e-11 | 74 |
urothelium | 1.15e-10 | 5 |
mouth | 2.97e-10 | 29 |
stomodeum | 2.97e-10 | 29 |
anterior region of body | 2.50e-09 | 62 |
craniocervical region | 2.50e-09 | 62 |
orifice | 5.32e-09 | 36 |
transitional epithelium | 8.17e-09 | 6 |
head | 1.49e-08 | 56 |
gingival epithelium | 4.20e-08 | 3 |
mucosa | 2.20e-07 | 20 |
lower respiratory tract epithelium | 2.39e-07 | 3 |
epithelium of bronchus | 2.39e-07 | 3 |
pharyngeal arch system | 7.08e-07 | 18 |
subdivision of head | 8.15e-07 | 49 |