FFCP PHASE1:Hg19::chr19:3062275..3062375,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=166 | |EntrezGene=166 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=307 | |HGNC=307 | ||
|TSSclassifier=strong | |||
|UniProt=Q08117,Q14CJ1,Q8WY48 | |UniProt=Q08117,Q14CJ1,Q8WY48 | ||
|association_with_transcript=0bp_to_ENST00000327141,NM_001130,NM_198970,uc002lwy.1,uc002lwz.1_5end | |association_with_transcript=0bp_to_ENST00000327141,NM_001130,NM_198970,uc002lwy.1,uc002lwz.1_5end | ||
|cluster_id=chr19:3062275..3062375,- | |||
|description=CAGE_peak_2_at_AES_5end | |description=CAGE_peak_2_at_AES_5end | ||
|id=chr19:3062275..3062375,- | |id=chr19:3062275..3062375,- | ||
|ontology_enrichment_celltype=CL:0000542!2.02e-14!53;CL:0000051!2.02e-14!53;CL:0000838!4.30e-14!52;CL:0000084!1.88e-11!25;CL:0000827!1.88e-11!25;CL:0000791!1.04e-10!18;CL:0000789!1.04e-10!18;CL:0002420!1.04e-10!18;CL:0002419!1.04e-10!18;CL:0000790!1.04e-10!18;CL:0000625!4.96e-07!11;CL:0000115!9.42e-07!35 | |ontology_enrichment_celltype=CL:0000542!2.02e-14!53;CL:0000051!2.02e-14!53;CL:0000838!4.30e-14!52;CL:0000084!1.88e-11!25;CL:0000827!1.88e-11!25;CL:0000791!1.04e-10!18;CL:0000789!1.04e-10!18;CL:0002420!1.04e-10!18;CL:0002419!1.04e-10!18;CL:0000790!1.04e-10!18;CL:0000625!4.96e-07!11;CL:0000115!9.42e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.86e-11;25!CL:0000791;1.03e-10;18!CL:0000789;1.03e-10;18!CL:0002419;1.03e-10;18!CL:0000542;4.24e-09;53!CL:0000625;4.92e-07;11!CL:0000236;8.94e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.02e-14,53;CL:0000051,2.02e-14,53;CL:0000838,4.30e-14,52;CL:0000084,1.88e-11,25;CL:0000827,1.88e-11,25;CL:0000791,1.04e-10,18;CL:0000789,1.04e-10,18;CL:0002420,1.04e-10,18;CL:0002419,1.04e-10,18;CL:0000790,1.04e-10,18;CL:0000115,4.59e-07,36;CL:0000625,4.96e-07,11;CL:0000222,9.55e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000790;1.03e-10;18!CL:0000051;4.24e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!3.51e-10!113;UBERON:0004535!1.63e-09!110;UBERON:0001981!1.45e-08!60;UBERON:0007500!1.45e-08!60;UBERON:0004537!1.45e-08!60;UBERON:0006965!1.45e-08!60;UBERON:0002049!3.19e-08!79;UBERON:0007798!3.19e-08!79;UBERON:0004872!6.19e-08!84;UBERON:0000055!8.96e-08!69 | |ontology_enrichment_uberon=UBERON:0001009!3.51e-10!113;UBERON:0004535!1.63e-09!110;UBERON:0001981!1.45e-08!60;UBERON:0007500!1.45e-08!60;UBERON:0004537!1.45e-08!60;UBERON:0006965!1.45e-08!60;UBERON:0002049!3.19e-08!79;UBERON:0007798!3.19e-08!79;UBERON:0004872!6.19e-08!84;UBERON:0000055!8.96e-08!69 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,6.81e-10,112;UBERON:0004535,3.11e-09,109;UBERON:0007500,3.00e-08,59;UBERON:0001981,3.00e-08,59;UBERON:0004537,3.00e-08,59;UBERON:0006965,3.00e-08,59;UBERON:0002049,6.20e-08,78;UBERON:0007798,6.20e-08,78;UBERON:0004872,1.18e-07,83;UBERON:0000055,1.76e-07,68 | |||
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| ||
|short_description=p2@AES | |short_description=p2@AES | ||
}} | }} |
Latest revision as of 04:23, 17 September 2015
Short description: | p2@AES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AES_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000327141, NM_001130, NM_198970, uc002lwy.1, uc002lwz.1_5end |
EntrezGene: | AES |
HGNC: | 307 |
UniProt: | Q08117Q14CJ1Q8WY48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.02e-14 | 53 |
common lymphoid progenitor | 2.02e-14 | 53 |
lymphoid lineage restricted progenitor cell | 4.30e-14 | 52 |
T cell | 1.88e-11 | 25 |
pro-T cell | 1.88e-11 | 25 |
mature alpha-beta T cell | 1.04e-10 | 18 |
alpha-beta T cell | 1.04e-10 | 18 |
immature T cell | 1.04e-10 | 18 |
mature T cell | 1.04e-10 | 18 |
immature alpha-beta T cell | 1.04e-10 | 18 |
endothelial cell | 4.59e-07 | 36 |
CD8-positive, alpha-beta T cell | 4.96e-07 | 11 |
mesodermal cell | 9.55e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
circulatory system | 6.81e-10 | 112 |
cardiovascular system | 3.11e-09 | 109 |
epithelial tube open at both ends | 3.00e-08 | 59 |
blood vessel | 3.00e-08 | 59 |
blood vasculature | 3.00e-08 | 59 |
vascular cord | 3.00e-08 | 59 |
vasculature | 6.20e-08 | 78 |
vascular system | 6.20e-08 | 78 |
splanchnic layer of lateral plate mesoderm | 1.18e-07 | 83 |
vessel | 1.76e-07 | 68 |