FFCP PHASE1:Hg19::chr15:32976526..32976537,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6447 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10816 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-79bp_to_ENST00000498607_5end | |||
|cluster_id=chr15:32976526..32976537,+ | |||
|coexpression_cluster_id=C414 | |||
|description=CAGE_peak_7_at_SCG5_5end | |||
|id=chr15:32976526..32976537,+ | |||
|ontology_enrichment_celltype=CL:0000569!1.86e-08!4;CL:0000011!1.86e-08!4;CL:0002621!2.18e-07!3;CL:0000055!4.12e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002539;3.45e-11;10!CL:0002621;1.22e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,3.36e-11,10;CL:0002621,1.34e-09,3;CL:0000359,4.77e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.19e-09!5;DOID:450!1.19e-09!5;DOID:66!1.19e-09!5;DOID:423!1.19e-09!5;DOID:0080000!1.19e-09!5;DOID:11722!1.19e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:3571;7.59e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,1.14e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002199!3.02e-08!45;UBERON:0002416!3.02e-08!45;UBERON:0002097!1.79e-07!40;UBERON:0001949!2.18e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;3.45e-11;10!UBERON:0004695;3.45e-11;10!UBERON:0002111;3.45e-11;10!UBERON:0004178;3.45e-11;10!UBERON:0001949;1.22e-09;3!UBERON:0001282;1.65e-08;1!UBERON:0009842;1.65e-08;1!UBERON:0003704;1.65e-08;1!UBERON:0001171;1.65e-08;1!UBERON:0001172;1.65e-08;1!UBERON:0007195;3.00e-08;1!UBERON:0000947;6.55e-08;21!UBERON:0010191;6.55e-08;21!UBERON:0001135;1.72e-07;15!UBERON:0004573;5.60e-07;33!UBERON:0004571;5.60e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,3.36e-11,10;UBERON:0004695,3.36e-11,10;UBERON:0002111,3.36e-11,10;UBERON:0004178,3.36e-11,10;UBERON:0001949,1.34e-09,3;UBERON:0001282,1.65e-08,1;UBERON:0009842,1.65e-08,1;UBERON:0003704,1.65e-08,1;UBERON:0001171,1.65e-08,1;UBERON:0001172,1.65e-08,1;UBERON:0007195,2.90e-08,1;UBERON:0000947,6.08e-08,21;UBERON:0010191,6.08e-08,21;UBERON:0001135,1.69e-07,15;UBERON:0001637,5.42e-07,42;UBERON:0003509,5.42e-07,42;UBERON:0004572,5.42e-07,42;UBERON:0004573,7.58e-07,33;UBERON:0004571,7.58e-07,33 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70627602516243,3.01347264011988,2.19093027116212,2.92759679274304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,1.58891016975863,0,0,0,0,2.96001058100592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.179389635688862,0.427114777637135,0.847727604638247,0.300091096084402,0.103052529238439,0,0.18611685633159,0,0,0,0.368199594569197,0.161646056818812,0.355009592516614,0.403008392910561,0,1.54608682530637,1.09098448236334,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,1.1240175325762,0.201057944823262,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.738651018262192,2.80805118167085,0.148631162288728,0,0.335964256397719,1.27597587518148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0.511707249066704,0.321707842287215,0,0.154209693802656,0.177561725313127,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.661139661443912,0.192190067365106,0.127612712494584,0.10115778085555,0,0.62962469366128,0,0,0,0,1.11194531462352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876901770507525,0,0,1.21746226177622,0,0,0,0.0982490410131212,0.7133421029625,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45234820091624,0,0,0,0,0,0.613612095012929,0,0.622079175323615,0.539210106883961,0,0,0,0,3.33410970433911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.5230205097283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23337732182076,0.794858446811959,0,0,6.09207033911656,0,0,0,0,0,0,0,0,0.135904206073614,0,0.203996435272644,0.866851769704557,0,0,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87426823963964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,2.05956061557231,0.151230923763239,0.310874401165561,0.443565449968902,0,5.39763734596325,0.310525913752519,0,0.265841714557995,0.521745061811734,0.601030435988874,0,0,0,0.214821114084977,1.85613503951397,0,0,0,0,0,0,0,0,1.36023555307363,0,0.244736704506468,0.358177682162975,0,0,0,0,0,0,0,0,0,0,0,0,1.31043939538565,0.245772908753719,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19520305013884,0,0,0,4.23580644277392,0,0,0,0,0,0,0,0,0,0,0,0.703484977438482,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.60659312903067,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p7@SCG5 | |||
}} |
Latest revision as of 04:18, 17 September 2015
Short description: | p7@SCG5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SCG5_5end |
Coexpression cluster: | C414_cholangiocellular_testis_gall_pagetoid_mesothelioma_thyroid_osteoclastoma |
Association with transcript: | -79bp_to_ENST00000498607_5end |
EntrezGene: | SCG5 |
HGNC: | 10816 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 3.36e-11 | 10 |
gingival epithelial cell | 1.34e-09 | 3 |
vascular associated smooth muscle cell | 4.77e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 3.36e-11 | 10 |
arterial system smooth muscle | 3.36e-11 | 10 |
artery smooth muscle tissue | 3.36e-11 | 10 |
aorta smooth muscle tissue | 3.36e-11 | 10 |
gingival epithelium | 1.34e-09 | 3 |
intralobular bile duct | 1.65e-08 | 1 |
acinus | 1.65e-08 | 1 |
intrahepatic bile duct | 1.65e-08 | 1 |
portal lobule | 1.65e-08 | 1 |
hepatic acinus | 1.65e-08 | 1 |
stroma of bone marrow | 2.90e-08 | 1 |
aorta | 6.08e-08 | 21 |
aortic system | 6.08e-08 | 21 |
smooth muscle tissue | 1.69e-07 | 15 |
artery | 5.42e-07 | 42 |
arterial blood vessel | 5.42e-07 | 42 |
arterial system | 5.42e-07 | 42 |
systemic artery | 7.58e-07 | 33 |
systemic arterial system | 7.58e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 1.14e-07 | 1 |