FFCP PHASE1:Hg19::chr19:3061212..3061234,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:3061212..3061234,-
|short_description=p13@AES
|description=CAGE_peak_13_at_AES_5end
|association_with_transcript=11bp_to_X73358_5end
|EntrezGene=166
|HG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=166 | |EntrezGene=166 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=307 | |HGNC=307 | ||
|TSSclassifier=strong | |||
|UniProt=Q08117 | |UniProt=Q08117 | ||
|association_with_transcript=11bp_to_X73358_5end | |||
|cluster_id=chr19:3061212..3061234,- | |||
|description=CAGE_peak_13_at_AES_5end | |||
|id=chr19:3061212..3061234,- | |||
|ontology_enrichment_celltype=CL:0000838!1.68e-10!52;CL:0000542!2.20e-10!53;CL:0000051!2.20e-10!53;CL:0000791!3.75e-08!18;CL:0000789!3.75e-08!18;CL:0002420!3.75e-08!18;CL:0002419!3.75e-08!18;CL:0000790!3.75e-08!18;CL:0000084!5.36e-08!25;CL:0000827!5.36e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.74e-14;13!CL:0000791;4.31e-11;18!CL:0000789;4.31e-11;18!CL:0002419;4.31e-11;18!CL:0000542;3.57e-10;53!CL:0000084;2.57e-08;25!CL:0000625;5.11e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.23e-15,52;CL:0000542,3.61e-15,53;CL:0000051,3.61e-15,53;CL:0000236,4.10e-13,14;CL:0000791,4.55e-11,18;CL:0000789,4.55e-11,18;CL:0002420,4.55e-11,18;CL:0002419,4.55e-11,18;CL:0000790,4.55e-11,18;CL:0000084,2.97e-08,25;CL:0000827,2.97e-08,25;CL:0000625,6.82e-07,11;CL:0000624,7.37e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;4.31e-11;18!CL:0000051;3.57e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p13@AES | |||
}} | }} |
Latest revision as of 04:18, 17 September 2015
Short description: | p13@AES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_AES_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_X73358_5end |
EntrezGene: | AES |
HGNC: | 307 |
UniProt: | Q08117 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.23e-15 | 52 |
lymphocyte | 3.61e-15 | 53 |
common lymphoid progenitor | 3.61e-15 | 53 |
B cell | 4.10e-13 | 14 |
mature alpha-beta T cell | 4.55e-11 | 18 |
alpha-beta T cell | 4.55e-11 | 18 |
immature T cell | 4.55e-11 | 18 |
mature T cell | 4.55e-11 | 18 |
immature alpha-beta T cell | 4.55e-11 | 18 |
T cell | 2.97e-08 | 25 |
pro-T cell | 2.97e-08 | 25 |
CD8-positive, alpha-beta T cell | 6.82e-07 | 11 |
CD4-positive, alpha-beta T cell | 7.37e-07 | 6 |