FFCP PHASE1:Hg19::chr12:12510353..12510360,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=118426 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17950 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=1bp_to_ENST00000298571_5end | |||
|cluster_id=chr12:12510353..12510360,+ | |||
|coexpression_cluster_id=C179 | |||
|description=CAGE_peak_8_at_LOH12CR1_5end | |||
|id=chr12:12510353..12510360,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.62e-21!140;CL:0002087!2.63e-20!119;CL:0000037!7.88e-16!172;CL:0000566!7.88e-16!172;CL:0002031!9.05e-16!124;CL:0000988!2.59e-15!182;CL:0002032!1.16e-13!165;CL:0000837!1.16e-13!165;CL:0002057!1.25e-11!42;CL:0000542!4.16e-11!53;CL:0000051!4.16e-11!53;CL:0000860!4.74e-11!45;CL:0000838!1.06e-10!52;CL:0002009!3.19e-08!65;CL:0002194!4.07e-08!63;CL:0000576!4.07e-08!63;CL:0000040!4.07e-08!63;CL:0000559!4.07e-08!63;CL:0000766!7.78e-08!76;CL:0000624!1.90e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000236;5.15e-29;13!CL:0000815;9.16e-22;2!CL:0000792;9.16e-22;2!CL:0002677;9.16e-22;2!CL:0000624;3.29e-16;6!CL:0000945;1.42e-15;24!CL:0000226;7.52e-15;3!CL:0000898;7.52e-15;3!CL:0000842;7.52e-15;3!CL:0000542;2.51e-14;53!CL:0000791;1.43e-09;18!CL:0000789;1.43e-09;18!CL:0002419;1.43e-09;18!CL:0000084;6.15e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,6.81e-27,14;CL:0000815,2.85e-22,2;CL:0000792,2.85e-22,2;CL:0002677,2.85e-22,2;CL:0000838,4.91e-19,52;CL:0000542,1.19e-18,53;CL:0000051,1.19e-18,53;CL:0000624,1.54e-16,6;CL:0000945,1.48e-15,24;CL:0000826,1.48e-15,24;CL:0000898,3.46e-15,3;CL:0000738,3.88e-15,136;CL:0000226,7.02e-15,3;CL:0000842,7.02e-15,3;CL:0002087,1.94e-13,115;CL:0000037,7.55e-12,168;CL:0000988,3.90e-11,177;CL:0000791,1.04e-09,18;CL:0000789,1.04e-09,18;CL:0002420,1.04e-09,18;CL:0002419,1.04e-09,18;CL:0000790,1.04e-09,18;CL:0002032,4.40e-09,161;CL:0000837,4.40e-09,161;CL:0002031,5.54e-09,120;CL:0000084,4.92e-07,25;CL:0000827,4.92e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000051;2.51e-14;53!CL:0000790;1.43e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.21e-07!102;UBERON:0003061!8.21e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0,1.15148819429164,0.619264493264304,0,0,0,0.0774672005803016,0.142169232487422,0,0.553995408531877,0.802177789880567,0.434021741431704,0,0,0.257575567634187,0.145398238779565,0.377875943688809,0.485168122375632,0,0.411167888021826,0.619412741790207,0,0.768482119587302,0.236482229888585,0,0,0,0.376484679085209,0.545812300115692,0.224723484445085,0.306083892370903,0.320929027076094,0.639337125799041,0.329851300186716,0.199463657621632,0,0,0.56738522469114,0.622822248995575,0.251248665256743,0,0,0.605399502633369,0,0,1.05627643155971,0.212604299965044,0,0.44931452458598,0.300353785683013,0,0.570025487482497,0.19891667719909,0,1.75996244461323,1.09227722252426,0,0.426730222566507,0,1.14950487990897,0.661044872784862,0,3.41527781465669,6.45960908308033,6.11637165000366,1.32171328579026,1.12101712596307,0,0.393419540227666,1.57204305099666,0.822405995998037,0.167186495390678,1.62961133316795,0.473447805734733,0,0.557052284425868,1.76763544484902,0.443067789167242,1.08321545506006,0,0.130059347559878,0.328875809207352,0,0.289803085735052,0.444859689486181,0.535081656179426,0,0.113309342697566,0.766440987203842,0,0,0,0,0,0.150575119077773,0,0,0.473554504088034,0,0.403213486449465,2.13952156626806,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0.74291500265913,0.39752481473341,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0.25326102332916,0,0,0,0,0,0,0.311211035399766,0,0.326923806226917,0,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.220587945464788,0.217879444092406,0.237270619111097,0.269662616320329,0,0.769494313892781,0,0,0,0,0,0,0,0,0.245976877086227,0,0.219500570817251,0,0.100528972411631,0.277765335475589,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0.246217006087397,0,0.148631162288728,0,0.16798212819886,0.283550194484773,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.788123040807709,0.862510299438069,0.77005821767849,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.2942852049117,1.38745825144478,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0.241718899183244,0.200506470303285,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0.30347334256665,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0.1605880751037,0,0.425846237690326,0,0,0.223676107892416,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0.16480387422676,0,0.19924798825107,0.276283915531148,0,0.409074730008619,0.123084805461069,0,0.179736702294654,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0.0874599999961957,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0.219385397153973,0.435753854075961,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0.134802265961354,0,0.468528891450678,0,0.19566461893209,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0.164230914106418,0,0.176512253383001,0,0,0,0.189932387867636,0,0,0.213452994739353,0,0.288180834308212,0,0.171594997861965,0.288109595976299,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13480708770837,0,0.338693328263138,0,0.272406812223151,0,0.137539436597234,0.415440338029185,0.2249738915515,0,0.425246896606173,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0.13223260174269,0,0,0,0.157204305099666,0,0,0.197611631897944,0.365377795142688,0,0,0,0,0,0.157054096250234,0,0.244052529803926,0.1251909307065,0,0.221858103073705,0.372578417648301,0,0,0,0.570930667089935,0,0,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0.398594520940089,0,0,0,0,0,0,0.688859918643263,0,0,0.139879507719444,0,0.511577485214607,0.215649622793364,0,0,0.169732529954025,0,0.123935764259002,0,0,0.0788617450012534,0,0,0.3062454773532,0.0642292250964595,0,0.159633859057151,0.82046545696302,0,0.276629009856872,0.322951291263702,0,0.196295437002051,0.11796972334774,0,0.115525666150338,0,0,0,0,0,1.56302802246618,0,0,0,0.337687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| |||
|short_description=p8@LOH12CR1 | |||
}} |
Latest revision as of 04:17, 17 September 2015
Short description: | p8@LOH12CR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LOH12CR1_5end |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | 1bp_to_ENST00000298571_5end |
EntrezGene: | LOH12CR1 |
HGNC: | 17950 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 6.81e-27 | 14 |
regulatory T cell | 2.85e-22 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.85e-22 | 2 |
naive regulatory T cell | 2.85e-22 | 2 |
lymphoid lineage restricted progenitor cell | 4.91e-19 | 52 |
lymphocyte | 1.19e-18 | 53 |
common lymphoid progenitor | 1.19e-18 | 53 |
CD4-positive, alpha-beta T cell | 1.54e-16 | 6 |
lymphocyte of B lineage | 1.48e-15 | 24 |
pro-B cell | 1.48e-15 | 24 |
naive T cell | 3.46e-15 | 3 |
leukocyte | 3.88e-15 | 136 |
single nucleate cell | 7.02e-15 | 3 |
mononuclear cell | 7.02e-15 | 3 |
nongranular leukocyte | 1.94e-13 | 115 |
hematopoietic stem cell | 7.55e-12 | 168 |
hematopoietic cell | 3.90e-11 | 177 |
mature alpha-beta T cell | 1.04e-09 | 18 |
alpha-beta T cell | 1.04e-09 | 18 |
immature T cell | 1.04e-09 | 18 |
mature T cell | 1.04e-09 | 18 |
immature alpha-beta T cell | 1.04e-09 | 18 |
hematopoietic oligopotent progenitor cell | 4.40e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.40e-09 | 161 |
hematopoietic lineage restricted progenitor cell | 5.54e-09 | 120 |
T cell | 4.92e-07 | 25 |
pro-T cell | 4.92e-07 | 25 |