FFCP PHASE1:Hg19::chr2:139259390..139259401,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339745 | |EntrezGene=339745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27934 | |HGNC=27934 | ||
|TSSclassifier=strong | |||
|UniProt=Q6IQ16 | |UniProt=Q6IQ16 | ||
|association_with_transcript=19bp_to_ENST00000280098_5end | |association_with_transcript=19bp_to_ENST00000280098_5end | ||
|cluster_id=chr2:139259390..139259401,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_5_at_SPOPL_5end | |description=CAGE_peak_5_at_SPOPL_5end | ||
|id=chr2:139259390..139259401,+ | |id=chr2:139259390..139259401,+ | ||
|ontology_enrichment_celltype=CL:0000738!6.44e-25!140;CL:0002057!9.91e-24!42;CL:0000860!4.13e-23!45;CL:0000766!2.56e-21!76;CL:0002087!1.83e-20!119;CL:0002031!1.03e-18!124;CL:0000037!4.01e-18!172;CL:0000566!4.01e-18!172;CL:0002032!1.87e-16!165;CL:0000837!1.87e-16!165;CL:0000839!6.83e-16!70;CL:0002194!1.51e-15!63;CL:0000576!1.51e-15!63;CL:0000040!1.51e-15!63;CL:0000559!1.51e-15!63;CL:0000988!5.46e-15!182;CL:0000557!1.21e-14!71;CL:0002009!2.35e-14!65;CL:0000763!2.34e-11!112;CL:0000049!2.34e-11!112;CL:0000094!3.01e-07!8 | |ontology_enrichment_celltype=CL:0000738!6.44e-25!140;CL:0002057!9.91e-24!42;CL:0000860!4.13e-23!45;CL:0000766!2.56e-21!76;CL:0002087!1.83e-20!119;CL:0002031!1.03e-18!124;CL:0000037!4.01e-18!172;CL:0000566!4.01e-18!172;CL:0002032!1.87e-16!165;CL:0000837!1.87e-16!165;CL:0000839!6.83e-16!70;CL:0002194!1.51e-15!63;CL:0000576!1.51e-15!63;CL:0000040!1.51e-15!63;CL:0000559!1.51e-15!63;CL:0000988!5.46e-15!182;CL:0000557!1.21e-14!71;CL:0002009!2.35e-14!65;CL:0000763!2.34e-11!112;CL:0000049!2.34e-11!112;CL:0000094!3.01e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.38e-23;33!CL:0002057;7.38e-23;33!CL:0000094;2.60e-22;8!CL:0000766;8.92e-19;69!CL:0000576;2.29e-18;48!CL:0000473;3.10e-17;39!CL:0000234;3.10e-17;39!CL:0000081;6.30e-16;11!CL:0000236;1.19e-12;13!CL:0000775;2.21e-12;3!CL:0000738;5.39e-09;136!CL:0000771;6.18e-09;2!CL:0002087;8.06e-09;104!CL:0000763;6.11e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.38e-34,136;CL:0000860,1.31e-31,42;CL:0002057,1.31e-31,42;CL:0000766,2.48e-31,72;CL:0000037,2.97e-27,168;CL:0000473,5.61e-27,48;CL:0000234,5.61e-27,48;CL:0002032,1.42e-25,161;CL:0000837,1.42e-25,161;CL:0000988,2.28e-25,177;CL:0002087,5.08e-23,115;CL:0000094,1.79e-22,8;CL:0002031,9.75e-22,120;CL:0002194,1.66e-20,59;CL:0000576,1.66e-20,59;CL:0000040,1.66e-20,59;CL:0000559,1.66e-20,59;CL:0000763,4.04e-20,108;CL:0000049,4.04e-20,108;CL:0002009,1.13e-19,61;CL:0000839,8.25e-18,66;CL:0000557,1.80e-17,67;CL:0000081,4.84e-16,11;CL:0000775,1.79e-12,3;CL:0000236,1.24e-11,14;CL:0000134,3.68e-09,354;CL:0000771,5.89e-09,2;CL:0002320,8.59e-09,361;CL:0000219,1.68e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.31e-24;42!CL:0000049;3.94e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.11e-16!102;UBERON:0003061!2.11e-16!102;UBERON:0002193!2.76e-15!112;UBERON:0002371!1.26e-13!80;UBERON:0002405!1.61e-13!115;UBERON:0001474!1.13e-12!86;UBERON:0004765!2.84e-11!101;UBERON:0001434!2.84e-11!101 | |ontology_enrichment_uberon=UBERON:0002390!2.11e-16!102;UBERON:0003061!2.11e-16!102;UBERON:0002193!2.76e-15!112;UBERON:0002371!1.26e-13!80;UBERON:0002405!1.61e-13!115;UBERON:0001474!1.13e-12!86;UBERON:0004765!2.84e-11!101;UBERON:0001434!2.84e-11!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.13e-16,98;UBERON:0003061,6.13e-16,98;UBERON:0002371,8.08e-15,76;UBERON:0002193,6.56e-14,108;UBERON:0001474,2.24e-13,82;UBERON:0004765,9.36e-12,90;UBERON:0002405,3.21e-11,93;UBERON:0001434,4.23e-10,100;UBERON:0002384,2.72e-08,371 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0.662794751455832,0,0.602694528023977,0,0,0,0.408001382488506,0,0,0,0.376627918784408,0.534893840235659,0.410502947249729,0.236132343941038,1.18009283054671,0.767658796194425,1.54816123316076,0.919421224478927,0,0,0.232401601740905,0.568676929949686,0.293600439334847,0.553995408531877,1.20326668482085,1.08505435357926,0.447830948479849,0.32389366601898,0.515151135268373,1.16318591023652,1.51150377475524,0.970336244751265,0.929716147622738,1.23350366406548,2.78735733805593,0.575384784644301,0.768482119587302,0.945928919554341,1.03423704220986,0.645484683583826,2.70852973188684,2.07066573496865,1.09162460023138,1.79778787556068,0.918251677112708,0.641858054152187,0.639337125799041,2.63881040149373,1.59570926097305,0.426224750532694,2.90209238628584,0.56738522469114,1.86846674698672,1.7587406567972,1.0429658368404,1.73751075764093,0,0.736555271975129,1.58231193720442,1.05627643155971,0.425208599930087,0.628975936525128,0.561643155732475,0.450530678524519,0.964353520182481,0.855038231223746,1.59133341759272,0.91332076882317,0,0.546138611262131,2.66852776159066,0.426730222566507,1.20118796110804,1.14950487990897,1.32208974556972,0,1.1384259382189,2.93618594685469,3.05818582500183,1.32171328579026,2.24203425192614,0,0.393419540227666,0,0.411202997999018,0.501559486172034,0,0,0,0.222820913770347,0,0,0,0,0.390178042679635,0.328875809207352,0.552700035571697,0,0,0.267540828089713,0,0.226618685395132,0.383220493601921,0.34362744548263,0.759059076058509,0.318565414324097,0,0,0.602300476311091,0,0,1.18388626022008,0.821127996921047,1.61285394579786,1.06976078313403,0.579297615531196,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0.189069634328136,0.221729397462564,0,0.0654895377488563,0,0.370784442784429,0,0.174129737299267,0,0.715471872916026,1.14398982156026,2.22874500797739,0,0,0,0,0.419499436209906,0.275118041940067,0.835979866147242,0.258416759169329,0.35576626268671,0,0,0,0.24406205754817,0.367663080345869,1.62028389576352,0,0,0.112611480483322,0,0,0.183201743930407,3.9534125230819,11.6334079244498,0,0,0.25326102332916,0,0,0.709336764396714,0.560677600142307,0,0.24666754841716,0.311211035399766,0.404132016209064,0.163461903113459,0,0,0,0.312160076830321,0.570471821544449,0,0.352303495931295,0,0.140450806702248,0,0.122834317311768,0.206651562351531,0,0,0,0,0,0.375355559615893,0,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0,0.211931901159562,0,0,0,0,0.337552664482532,0.194874010322397,0.252433774244115,0,0,0,0.201504196455281,0.339121184620975,0.386521706326594,0.272746120590835,0.286804595389004,0.243947412259191,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0.368965315629341,0,0.219500570817251,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0.268675568108545,0,0,0,0.528290604079356,0.414656231081544,0.576479813667846,0.6312121671319,0,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0.823240336780769,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0.448340575974109,0.788123040807709,0,1.66845947163673,0,0,0.773288812777695,0.167516265334349,0,3.74503511973591,2.99161459204025,6.63064821497657,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0.300946099727719,0,1.03473071292505,0,0,0,0,0,0.206768026122887,0.862856803274467,0.960548020230999,0,0,0,0,0,0.280660094433074,0.128139149255701,0.511707249066704,0.321707842287215,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0.460404944679482,0.114814448164607,0,0,0,0,0,0,0,0,0,0.647747748306418,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.412164046590889,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0,0.0890320356467374,0,0,0.510450849978337,0.4046311234222,0,0.31481234683064,0,0.308033580176089,0,0,0,0.429374660225974,0.372158369359667,0,0.571890581771475,0,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0.196498082026242,0,0,0.211107635297664,0.329294892959902,0,0.699869440489966,0,0,0,0.659006605437454,0,0,0,0,3.04468565539302,0.764637207142375,2.27858874869665,0.238231775457789,0,2.59389324477087,1.08006287447623,0,0.106824071127473,0,0,0.557409525377156,0.144269212976445,0,0,0,0.383010740264733,0,0,0,0.228234679033192,0.313359791546046,0,0.338583555603207,0.321176150207399,0.201799707191048,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0.18714054040822,0,0.485442086998054,0.334330152832435,0,1.19372242368845,0.296964680832639,0,0,0.562677665642051,0.222617410045812,0,1.05562704063997,0.996239941255349,1.10513566212459,0,0.20453736500431,0.615424027305347,0,0,0.179021174675609,1.02314474045374,0.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| ||
|short_description=p5@SPOPL | |short_description=p5@SPOPL | ||
}} | }} |
Latest revision as of 04:08, 17 September 2015
Short description: | p5@SPOPL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SPOPL_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 19bp_to_ENST00000280098_5end |
EntrezGene: | SPOPL |
HGNC: | 27934 |
UniProt: | Q6IQ16 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.38e-34 | 136 |
classical monocyte | 1.31e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.31e-31 | 42 |
myeloid leukocyte | 2.48e-31 | 72 |
hematopoietic stem cell | 2.97e-27 | 168 |
defensive cell | 5.61e-27 | 48 |
phagocyte | 5.61e-27 | 48 |
hematopoietic oligopotent progenitor cell | 1.42e-25 | 161 |
hematopoietic multipotent progenitor cell | 1.42e-25 | 161 |
hematopoietic cell | 2.28e-25 | 177 |
nongranular leukocyte | 5.08e-23 | 115 |
granulocyte | 1.79e-22 | 8 |
hematopoietic lineage restricted progenitor cell | 9.75e-22 | 120 |
monopoietic cell | 1.66e-20 | 59 |
monocyte | 1.66e-20 | 59 |
monoblast | 1.66e-20 | 59 |
promonocyte | 1.66e-20 | 59 |
myeloid cell | 4.04e-20 | 108 |
common myeloid progenitor | 4.04e-20 | 108 |
macrophage dendritic cell progenitor | 1.13e-19 | 61 |
myeloid lineage restricted progenitor cell | 8.25e-18 | 66 |
granulocyte monocyte progenitor cell | 1.80e-17 | 67 |
blood cell | 4.84e-16 | 11 |
neutrophil | 1.79e-12 | 3 |
B cell | 1.24e-11 | 14 |
mesenchymal cell | 3.68e-09 | 354 |
eosinophil | 5.89e-09 | 2 |
connective tissue cell | 8.59e-09 | 361 |
motile cell | 1.68e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.13e-16 | 98 |
blood island | 6.13e-16 | 98 |
bone marrow | 8.08e-15 | 76 |
hemolymphoid system | 6.56e-14 | 108 |
bone element | 2.24e-13 | 82 |
skeletal element | 9.36e-12 | 90 |
immune system | 3.21e-11 | 93 |
skeletal system | 4.23e-10 | 100 |
connective tissue | 2.72e-08 | 371 |