FFCP PHASE1:Hg19::chr6:21666712..21666730,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=401237 | |EntrezGene=401237 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=28245 | |HGNC=28245 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=37bp_to_NR_015410,uc003ndj.2,uc011djj.1_5end | |||
|cluster_id=chr6:21666712..21666730,+ | |||
|coexpression_cluster_id=C724 | |||
|description=CAGE_peak_7_at_LINC00340_5end | |||
|id=chr6:21666712..21666730,+ | |||
|ontology_enrichment_celltype=CL:0002139!5.56e-23!24;CL:0000115!4.16e-19!35;CL:0002078!2.83e-15!44;CL:0000071!1.34e-14!18;CL:0002546!1.34e-14!18;CL:0000213!3.11e-11!57;CL:0000215!3.11e-11!57;CL:0005020!1.44e-10!6;CL:0002138!1.44e-10!6;CL:0005022!1.44e-10!6;CL:0002322!1.14e-08!5;CL:1000413!6.28e-08!9;CL:0000047!7.96e-08!8;CL:0000540!1.65e-07!6;CL:0000031!1.65e-07!6;CL:0000404!1.65e-07!6;CL:0000222!1.78e-07!119;CL:0002321!1.99e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.46e-12;24!CL:0002138;2.58e-10;6!CL:0000115;1.63e-08;36!CL:1001319;2.70e-08;1!CL:1000600;2.70e-08;1!CL:0002078;3.55e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.11e-12,24;CL:0005020,2.34e-10,6;CL:0002138,2.34e-10,6;CL:0005022,2.34e-10,6;CL:0000115,3.19e-10,36;CL:1001319,2.70e-08,1;CL:1000600,2.70e-08,1;CL:0002078,5.91e-08,45;CL:0000047,8.23e-08,8 | |||
|ontology_enrichment_development_v019=CL:0005022;2.58e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.34e-14!18;UBERON:0004638!1.34e-14!18;UBERON:0004852!1.34e-14!18;UBERON:0002049!6.37e-14!79;UBERON:0007798!6.37e-14!79;UBERON:0000055!7.56e-14!69;UBERON:0000487!5.71e-13!22;UBERON:0006914!1.09e-12!25;UBERON:0001009!2.01e-12!113;UBERON:0004535!3.34e-12!110;UBERON:0001981!1.07e-09!60;UBERON:0007500!1.07e-09!60;UBERON:0004537!1.07e-09!60;UBERON:0006965!1.07e-09!60;UBERON:0004111!2.64e-08!241;UBERON:0000477!3.21e-08!286;UBERON:0000025!4.83e-08!194;UBERON:0003915!6.28e-08!9;UBERON:0004700!6.28e-08!9;UBERON:0001917!6.28e-08!9;UBERON:0000483!7.05e-08!309;UBERON:0001473!1.17e-07!8;UBERON:0004536!1.17e-07!8;UBERON:0006558!1.17e-07!8;UBERON:0000119!1.21e-07!312;UBERON:0004872!4.92e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;4.01e-09;49!UBERON:0004645;2.70e-08;1!UBERON:0001256;2.70e-08;1!UBERON:0001259;2.70e-08;1!UBERON:0001473;7.48e-08;8!UBERON:0004536;7.48e-08;8!UBERON:0006558;7.48e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,2.70e-08,1;UBERON:0001256,2.70e-08,1;UBERON:0001259,2.70e-08,1;UBERON:0001473,6.97e-08,8;UBERON:0004536,6.97e-08,8;UBERON:0006558,6.97e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0,0.369363174230364,0,0.313454721478088,0.85870796139317,0.547497700291537,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96513985737078,4.48406850385229,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.221729397462564,0.43917392846563,0.130979075497713,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0.198762407366705,0,0.347140501607594,1.13061588384802,1.25849830862972,0.275118041940067,0.208994966536811,1.55050055501597,0.71153252537342,2.67776490211736,0.805658634218294,0.760272105718513,0,0,0.81014194788176,0.714397826272638,0.22452937262617,0.112611480483322,1.53316637465883,0,1.64881569537367,0,0,0,0,0,0,0,0,0,0,0,0,0.67355336034844,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975789649036763,0.795178609928912,0.580969714347592,0.932949495138334,0.504641701751257,2.91981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.927443239800615,0.117408694235822,2.02113026865503,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,2.60279707715243,0.773288812777695,1.34013012267479,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0.340187410553031,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0.192190067365106,0.382838137483752,0,0,0.31481234683064,0.6970372701606,0,0,0,0.18532421910392,0.715624433709956,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0.383010740264733,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36408156524854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.11650708833493,3.70691816839509,5.32551942477822,0,0,0,0,0,0,0,1.20990716048664,3.36680037793539,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0.429226048136571,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0.803765742325096,0.825236619583403,0,0,0,0,0,0.0788057072991982,0.734364233889974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,1.10043013569766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,1.44921028610825,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,1.65609664502632,0,0,0,0.0642292250964595,0,0,0.205116364240755,4.28521883576921,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,3.82882366312754,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0.156986185701028,0,0,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,2.37186772281816,0,0.452888530700021,0,0.218559560503957,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788857810965923,0,2.61810414204226,0.5290268405154,0,0,0,0,0.109265571963696,0,0.101988829741982,0.534434810531121,0.36757959813938,0,0.0757786982182394,0,0,0,0,0.952257725854961,1.0980114672121,0.806971285846153,0,0.0636471582781649,0.202117188958219,0,0,0,0,0.665320713092027,11.3964576055364,0,0,0,0,0.611207220914332,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0,0.369363174230364,0,0.313454721478088,0.85870796139317,0.547497700291537,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96513985737078,4.48406850385229,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.221729397462564,0.43917392846563,0.130979075497713,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0.198762407366705,0,0.347140501607594,1.13061588384802,1.25849830862972,0.275118041940067,0.208994966536811,1.55050055501597,0.71153252537342,2.67776490211736,0.805658634218294,0.760272105718513,0,0,0.81014194788176,0.714397826272638,0.22452937262617,0.112611480483322,1.53316637465883,0,1.64881569537367,0,0,0,0,0,0,0,0,0,0,0,0,0.67355336034844,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975789649036763,0.795178609928912,0.580969714347592,0.932949495138334,0.504641701751257,2.91981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.927443239800615,0.117408694235822,2.02113026865503,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,2.60279707715243,0.773288812777695,1.34013012267479,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0.340187410553031,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0.192190067365106,0.382838137483752,0,0,0.31481234683064,0.6970372701606,0,0,0,0.18532421910392,0.715624433709956,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0.383010740264733,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36408156524854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.11650708833493,3.70691816839509,5.32551942477822,0,0,0,0,0,0,0,1.20990716048664,3.36680037793539,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0.429226048136571,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0.803765742325096,0.825236619583403,0,0,0,0,0,0.0788057072991982,0.734364233889974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,1.10043013569766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,1.44921028610825,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,1.65609664502632,0,0,0,0.0642292250964595,0,0,0.205116364240755,4.28521883576921,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,3.82882366312754,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0.156986185701028,0,0,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,2.37186772281816,0,0.452888530700021,0,0.218559560503957,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788857810965923,0,2.61810414204226,0.5290268405154,0,0,0,0,0.109265571963696,0,0.101988829741982,0.534434810531121,0.36757959813938,0,0.0757786982182394,0,0,0,0,0.952257725854961,1.0980114672121,0.806971285846153,0,0.0636471582781649,0.202117188958219,0,0,0,0,0.665320713092027,11.3964576055364,0,0,0,0,0.611207220914332,0,0,0.402547587182052,0 | ||
|short_description=p7@LINC00340 | |||
}} | }} |
Latest revision as of 04:08, 17 September 2015
Short description: | p7@LINC00340 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LINC00340_5end |
Coexpression cluster: | C724_transitionalcell_parietal_occipital_duodenum_temporal_non_CD34 |
Association with transcript: | 37bp_to_NR_015410, uc003ndj.2, uc011djj.1_5end |
EntrezGene: | LINC00340 |
HGNC: | 28245 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.11e-12 | 24 |
lymphangioblast | 2.34e-10 | 6 |
endothelial cell of lymphatic vessel | 2.34e-10 | 6 |
vascular lymphangioblast | 2.34e-10 | 6 |
endothelial cell | 3.19e-10 | 36 |
bladder cell | 2.70e-08 | 1 |
lower urinary tract cell | 2.70e-08 | 1 |
meso-epithelial cell | 5.91e-08 | 45 |
neuronal stem cell | 8.23e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 2.70e-08 | 1 |
wall of urinary bladder | 2.70e-08 | 1 |
mucosa of urinary bladder | 2.70e-08 | 1 |
lymphatic vessel | 6.97e-08 | 8 |
lymph vasculature | 6.97e-08 | 8 |
lymphatic part of lymphoid system | 6.97e-08 | 8 |