FFCP PHASE1:Hg19::chr11:1889880..1889892,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4046 | |EntrezGene=4046 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6707 | |HGNC=6707 | ||
|TSSclassifier=strong | |||
|UniProt=E9PBV6,P33241 | |UniProt=E9PBV6,P33241 | ||
|association_with_transcript=-10bp_to_ENST00000405957,NM_001013253,uc001luk.2_5end | |||
|cluster_id=chr11:1889880..1889892,+ | |||
|coexpression_cluster_id=C2118 | |||
|description=CAGE_peak_14_at_LSP1_5end | |||
|id=chr11:1889880..1889892,+ | |||
|ontology_enrichment_celltype=CL:0000153!1.68e-11!9;CL:0000447!1.68e-11!9;CL:0000327!3.84e-11!14;CL:0000188!4.97e-10!9;CL:0000667!3.52e-09!6;CL:0000058!3.52e-09!6;CL:0000138!3.52e-09!6;CL:0000499!3.69e-09!27;CL:0000135!6.79e-08!3;CL:0000386!6.79e-08!3;CL:0000388!6.79e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000153;6.57e-26;9!CL:0000447;6.57e-26;9!CL:0000138;4.32e-20;6!CL:0000327;1.34e-19;15!CL:0000499;3.18e-19;28!CL:0000135;2.82e-16;3!CL:0000388;2.82e-16;3!CL:0000214;1.00e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,9.80e-26,9;CL:0000447,9.80e-26,9;CL:0000058,7.73e-20,6;CL:0000138,7.73e-20,6;CL:0000327,1.56e-19,15;CL:0000499,3.50e-19,28;CL:0000135,2.69e-16,3;CL:0000388,2.69e-16,3;CL:0000214,8.80e-08,3;CL:0000151,2.07e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.68e-15!115;UBERON:0000043!6.79e-08!3;UBERON:0003978!4.42e-07!3;UBERON:0009751!4.42e-07!3;UBERON:0000946!4.42e-07!3;UBERON:0002523!4.42e-07!3;UBERON:0005983!4.42e-07!3;UBERON:0002165!4.42e-07!3;UBERON:0002062!4.42e-07!3;UBERON:0007280!4.42e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.82e-16;3!UBERON:0000043;2.82e-16;3!UBERON:0007845;2.82e-16;3!UBERON:0006915;1.00e-07;3!UBERON:0007616;1.00e-07;3!UBERON:0002217;1.00e-07;3!UBERON:0002018;1.00e-07;3!UBERON:0001723;2.02e-07;3!UBERON:0001033;2.02e-07;3!UBERON:0001134;3.10e-07;16!UBERON:0002036;3.10e-07;16!UBERON:0003978;4.00e-07;3!UBERON:0000946;4.00e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.69e-16,3;UBERON:0000043,2.69e-16,3;UBERON:0007845,2.69e-16,3;UBERON:0006915,8.80e-08,3;UBERON:0007616,8.80e-08,3;UBERON:0002217,8.80e-08,3;UBERON:0002018,8.80e-08,3;UBERON:0001723,2.74e-07,3;UBERON:0001033,2.74e-07,3;UBERON:0010056,2.74e-07,3;UBERON:0003978,2.83e-07,3;UBERON:0009751,2.83e-07,3;UBERON:0000946,2.83e-07,3;UBERON:0002523,2.83e-07,3;UBERON:0005983,2.83e-07,3;UBERON:0002165,2.83e-07,3;UBERON:0002062,2.83e-07,3;UBERON:0007280,2.83e-07,3 | |||
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| ||
|short_description=p14@LSP1 | |||
}} | }} |
Latest revision as of 04:04, 17 September 2015
Short description: | p14@LSP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_LSP1_5end |
Coexpression cluster: | C2118_Mesenchymal_Chondrocyte_tenocyte_retina_Synoviocyte_heart_spleen |
Association with transcript: | -10bp_to_ENST00000405957, NM_001013253, uc001luk.2_5end |
EntrezGene: | LSP1 |
HGNC: | 6707 |
UniProt: | E9PBV6P33241 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 9.80e-26 | 9 |
carbohydrate secreting cell | 9.80e-26 | 9 |
chondroblast | 7.73e-20 | 6 |
chondrocyte | 7.73e-20 | 6 |
extracellular matrix secreting cell | 1.56e-19 | 15 |
stromal cell | 3.50e-19 | 28 |
fibrocyte | 2.69e-16 | 3 |
tendon cell | 2.69e-16 | 3 |
synovial cell | 8.80e-08 | 3 |
secretory cell | 2.07e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.69e-16 | 3 |
tendon | 2.69e-16 | 3 |
regular connective tissue | 2.69e-16 | 3 |
stratified squamous epithelium | 8.80e-08 | 3 |
layer of synovial tissue | 8.80e-08 | 3 |
synovial joint | 8.80e-08 | 3 |
synovial membrane of synovial joint | 8.80e-08 | 3 |
tongue | 2.74e-07 | 3 |
gustatory system | 2.74e-07 | 3 |
future tongue | 2.74e-07 | 3 |
valve | 2.83e-07 | 3 |
cardiac mesenchyme | 2.83e-07 | 3 |
cardial valve | 2.83e-07 | 3 |
tunica intima | 2.83e-07 | 3 |
heart layer | 2.83e-07 | 3 |
endocardium | 2.83e-07 | 3 |
endocardial cushion | 2.83e-07 | 3 |
presumptive endocardium | 2.83e-07 | 3 |