FFCP PHASE1:Hg19::chr10:134150876..134150893,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80313 | |EntrezGene=80313 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29346 | |HGNC=29346 | ||
|TSSclassifier=strong | |||
|UniProt=B4DW88 | |UniProt=B4DW88 | ||
|association_with_transcript=32bp_to_ENST00000432555_5end | |association_with_transcript=32bp_to_ENST00000432555_5end | ||
|cluster_id=chr10:134150876..134150893,+ | |||
|description=CAGE_peak_5_at_LRRC27_5end | |description=CAGE_peak_5_at_LRRC27_5end | ||
|id=chr10:134150876..134150893,+ | |id=chr10:134150876..134150893,+ | ||
|ontology_enrichment_celltype=CL:0000115!3.54e-12!35;CL:0002139!1.29e-09!24;CL:0002078!2.95e-08!44 | |ontology_enrichment_celltype=CL:0000115!3.54e-12!35;CL:0002139!1.29e-09!24;CL:0002078!2.95e-08!44 | ||
|ontology_enrichment_celltype_v019=CL:0002619;1.22e-15;3!CL:0000037;2.32e-12;1!CL:0001024;2.32e-12;1!CL:0002262;8.28e-07;2!CL:1000398;8.28e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,8.44e-16,3;CL:0001024,3.45e-12,1;CL:0000115,1.31e-07,36;CL:0002262,7.20e-07,2;CL:1000398,7.20e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.32e-12;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.04e-12!115;UBERON:0000025!6.28e-11!194;UBERON:0001049!3.50e-10!57;UBERON:0005068!3.50e-10!57;UBERON:0006241!3.50e-10!57;UBERON:0007135!3.50e-10!57;UBERON:0002616!1.80e-09!59;UBERON:0004111!3.20e-09!241;UBERON:0000477!3.43e-08!286;UBERON:0000955!3.70e-08!69;UBERON:0006238!3.70e-08!69;UBERON:0001017!5.04e-08!82;UBERON:0005743!8.41e-08!86;UBERON:0002405!1.44e-07!115;UBERON:0000073!1.45e-07!94;UBERON:0001016!1.45e-07!94;UBERON:0005057!2.15e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.32e-12;1!UBERON:0001785;2.32e-12;1!UBERON:0002464;2.32e-12;1!UBERON:0004904;2.32e-12;1!UBERON:0001021;2.32e-12;1!UBERON:0002108;6.50e-10;4!UBERON:0003714;8.28e-07;2!UBERON:0001281;8.28e-07;2!UBERON:0005162;8.28e-07;2!UBERON:0000122;8.28e-07;2!UBERON:0003497;8.28e-07;2!UBERON:0003909;8.28e-07;2!UBERON:0003835;8.28e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.96e-12,1;UBERON:0001785,1.96e-12,1;UBERON:0002464,1.96e-12,1;UBERON:0004904,1.96e-12,1;UBERON:0001021,1.96e-12,1;UBERON:0003902,1.96e-12,1;UBERON:0005425,1.96e-12,1;UBERON:0002108,6.51e-10,4;UBERON:0001281,7.20e-07,2;UBERON:0003497,7.20e-07,2;UBERON:0003909,7.20e-07,2;UBERON:0003835,7.20e-07,2;UBERON:0003714,7.61e-07,2;UBERON:0005162,7.61e-07,2;UBERON:0000122,7.61e-07,2 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0.273748850145768,0,0,0,0.0787107813136792,0,0,0,0.919421224478927,0.30120591877825,0,0,0,1.17440175733939,0,0.200544447470142,0,0.671746422719773,1.29557466407592,1.80302897343931,0.145398238779565,0,0.242584061187816,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0.211255286311942,1.06302149982522,0,0.336985893439485,0.150176892841506,0,0,0,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0.26591592103773,0,0,0,0.79504962946682,0.860234595106124,0,0,0,0.275118041940067,0.208994966536811,0.516833518338658,0.35576626268671,0.66944122552934,0.402829317109147,0,0.24406205754817,0,0,0.446498641420399,0.22452937262617,0.675668882899933,1.53316637465883,0,0.732806975721629,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0.590789906681404,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0.866198686566443,0,0.570762456703795,0,0,0.246217006087397,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0,0.264145302039678,0,0.144119953416961,0.12624243342638,0.253991577168676,0.381988425558278,0,0,0.205654985406647,0,0.857479297891735,0.336393253036082,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,1.50677127429638,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0,0,0,0.512556597022804,0,0,0,0,0,0.0821271560138091,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.340187410553031,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0.142283686696828,0,0.399158742865633,0.191505370132367,1.2700414963433,0,0.842391534340376,0.912938716132769,0,0,0,0.642352300414798,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0.146508179271894,0,0.780103689942349,0,0,0,0,0,0.281338832821026,0,0,0,0,0.552567831062295,0,0.715880777515084,0,0,0.0898683511473268,0,2.04628948090749,0,0,0,0,0.278304294485554,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0.442317039724898,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0.141353071433941,0,0,0.265372693510018,0,0,0,0,0.202203398942031,0,0,0,0,0,0,3.62972148145992,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0.201550417460179,0.360299883542404,1.16495949527454,0.630265458457789,0.741742725430498,0.741438982396034,0.492137407573744,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.242998226632099,0,0,0.157363764404994,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0.146552233678082,1.32506888912221,0.129282956361551,0.13223260174269,0,0,0.640724475406168,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0.573409195690071,0.443716206147409,0.683060432355218,0,0,0.303298235083296,0,0,0,0,0,0.467426619694449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.490696182767533,0,0,0,0,0,0.344429959321631,0,0,0,0,0,4.63646689005732,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0.615349092722265,0,0.138314504928436,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0.620060389503552,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0.354809480650555,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0.214429632529969,0,0.464965701472501,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588901401691458,0.121917924982269,0,0.102662806856247,0,0,0,0,0,0,0,0.150962843566674,1.31196068783506,2.62271472604749,0,0,0,0.392616934229891,0,0.4226557275834,0,0.939839179798536,1.48253142339228,0,0,0,0.0802413666891683,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0.756998549010474,0.109265571963696,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0.20686599172379,0.426467963801962,0.476128862927481,0.452122368852043,0.124149428591716,0,0.12729431655633,0,0,0,0.0673520530145875,0.286888821570705,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 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| ||
|short_description=p5@LRRC27 | |short_description=p5@LRRC27 | ||
}} | }} |
Latest revision as of 03:54, 17 September 2015
Short description: | p5@LRRC27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LRRC27_5end |
Coexpression cluster: | NA |
Association with transcript: | 32bp_to_ENST00000432555_5end |
EntrezGene: | LRRC27 |
HGNC: | 29346 |
UniProt: | B4DW88 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 8.44e-16 | 3 |
CD34-positive, CD38-negative hematopoietic stem cell | 3.45e-12 | 1 |
endothelial cell | 1.31e-07 | 36 |
endothelial cell of sinusoid | 7.20e-07 | 2 |
endothelial cell of hepatic sinusoid | 7.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.96e-12 | 1 |
cranial nerve | 1.96e-12 | 1 |
nerve trunk | 1.96e-12 | 1 |
nerve connecting eye with brain | 1.96e-12 | 1 |
nerve | 1.96e-12 | 1 |
retinal neural layer | 1.96e-12 | 1 |
presumptive neural retina | 1.96e-12 | 1 |
small intestine | 6.51e-10 | 4 |
hepatic sinusoid | 7.20e-07 | 2 |
abdomen blood vessel | 7.20e-07 | 2 |
sinusoid | 7.20e-07 | 2 |
abdominal segment blood vessel | 7.20e-07 | 2 |
neural tissue | 7.61e-07 | 2 |
multi cell component structure | 7.61e-07 | 2 |
neuron projection bundle | 7.61e-07 | 2 |