FFCP PHASE1:Hg19::chr2:38358217..38358244,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285154 | |EntrezGene=285154 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=28543 | |HGNC=28543 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_ENST00000413828,NR_027252,uc010faj.1_5end | |association_with_transcript=-2bp_to_ENST00000413828,NR_027252,uc010faj.1_5end | ||
|cluster_id=chr2:38358217..38358244,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_CYP1B1-AS1_5end | |description=CAGE_peak_1_at_CYP1B1-AS1_5end | ||
|id=chr2:38358217..38358244,+ | |id=chr2:38358217..38358244,+ | ||
|ontology_enrichment_celltype=CL:0002194!1.88e-75!63;CL:0000576!1.88e-75!63;CL:0000040!1.88e-75!63;CL:0000559!1.88e-75!63;CL:0002057!1.19e-72!42;CL:0002009!1.27e-72!65;CL:0000766!1.31e-67!76;CL:0000860!7.76e-67!45;CL:0000839!3.03e-66!70;CL:0000557!4.46e-65!71;CL:0002087!6.92e-48!119;CL:0000763!7.59e-47!112;CL:0000049!7.59e-47!112;CL:0000738!1.22e-42!140;CL:0002031!4.46e-40!124;CL:0000037!6.77e-36!172;CL:0000566!6.77e-36!172;CL:0002032!4.12e-34!165;CL:0000837!4.12e-34!165;CL:0000988!8.49e-33!182;CL:0002393!3.48e-16!9;CL:0002397!3.48e-16!9;CL:0000134!2.83e-09!358;CL:0002320!9.39e-09!365;CL:0000219!2.36e-07!390 | |ontology_enrichment_celltype=CL:0002194!1.88e-75!63;CL:0000576!1.88e-75!63;CL:0000040!1.88e-75!63;CL:0000559!1.88e-75!63;CL:0002057!1.19e-72!42;CL:0002009!1.27e-72!65;CL:0000766!1.31e-67!76;CL:0000860!7.76e-67!45;CL:0000839!3.03e-66!70;CL:0000557!4.46e-65!71;CL:0002087!6.92e-48!119;CL:0000763!7.59e-47!112;CL:0000049!7.59e-47!112;CL:0000738!1.22e-42!140;CL:0002031!4.46e-40!124;CL:0000037!6.77e-36!172;CL:0000566!6.77e-36!172;CL:0002032!4.12e-34!165;CL:0000837!4.12e-34!165;CL:0000988!8.49e-33!182;CL:0002393!3.48e-16!9;CL:0002397!3.48e-16!9;CL:0000134!2.83e-09!358;CL:0002320!9.39e-09!365;CL:0000219!2.36e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.14e-91;33!CL:0002057;2.14e-91;33!CL:0000473;1.85e-85;39!CL:0000234;1.85e-85;39!CL:0000576;1.02e-80;48!CL:0000766;1.28e-55;69!CL:0000763;7.58e-26;100!CL:0002393;2.60e-19;6!CL:0002397;2.60e-19;6!CL:0002087;4.52e-19;104!CL:0000738;6.43e-16;136!CL:0000235;8.74e-14;6!CL:0000988;2.66e-10;177!CL:0000767;4.88e-10;3!CL:0000875;9.06e-10;3!CL:0002619;9.06e-10;3!CL:0002396;9.06e-10;3!CL:0000219;7.11e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.50e-141,48;CL:0000234,6.50e-141,48;CL:0002194,5.87e-136,59;CL:0000576,5.87e-136,59;CL:0000040,5.87e-136,59;CL:0000559,5.87e-136,59;CL:0002009,3.39e-131,61;CL:0000860,3.17e-128,42;CL:0002057,3.17e-128,42;CL:0000766,1.64e-123,72;CL:0000839,1.56e-120,66;CL:0000557,1.37e-118,67;CL:0000763,7.19e-82,108;CL:0000049,7.19e-82,108;CL:0002087,2.47e-70,115;CL:0000738,2.59e-65,136;CL:0002031,1.70e-61,120;CL:0000037,1.05e-52,168;CL:0002032,4.01e-51,161;CL:0000837,4.01e-51,161;CL:0000988,2.03e-49,177;CL:0002393,2.18e-27,9;CL:0002397,2.18e-27,9;CL:0000134,1.36e-18,354;CL:0002320,5.44e-18,361;CL:0000219,7.16e-16,386;CL:0000235,1.13e-13,6;CL:0000048,2.80e-13,427;CL:0000723,6.38e-13,433;CL:0000034,1.85e-12,441;CL:0000767,5.37e-10,3;CL:0000875,8.12e-10,3;CL:0002396,8.12e-10,3;CL:0002619,1.01e-09,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.36e-90;42!CL:0000049;3.95e-23;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.97e-71!102;UBERON:0003061!9.97e-71!102;UBERON:0002193!1.39e-62!112;UBERON:0002371!7.16e-56!80;UBERON:0001474!9.87e-55!86;UBERON:0004765!8.27e-46!101;UBERON:0001434!8.27e-46!101;UBERON:0002405!1.42e-44!115;UBERON:0003081!1.17e-24!216;UBERON:0002204!6.87e-22!167;UBERON:0001869!3.52e-11!32;UBERON:0002619!1.87e-10!22;UBERON:0001893!2.76e-10!34;UBERON:0000178!3.84e-10!15;UBERON:0000179!3.84e-10!15;UBERON:0000463!3.84e-10!15;UBERON:0001950!4.57e-10!20;UBERON:0007023!6.90e-10!115;UBERON:0002791!1.96e-09!33;UBERON:0002020!4.76e-09!34;UBERON:0003528!4.76e-09!34;UBERON:0002780!6.09e-09!41;UBERON:0001890!6.09e-09!41;UBERON:0006240!6.09e-09!41;UBERON:0000956!7.16e-09!25;UBERON:0000203!7.16e-09!25;UBERON:0003080!1.25e-08!42;UBERON:0002384!4.73e-08!375;UBERON:0000062!7.73e-08!511;UBERON:0000923!7.77e-08!604;UBERON:0005291!7.77e-08!604;UBERON:0006598!7.77e-08!604;UBERON:0002532!7.77e-08!604;UBERON:0002050!8.81e-08!605;UBERON:0005423!8.81e-08!605;UBERON:0000926!1.15e-07!448;UBERON:0004120!1.15e-07!448;UBERON:0006603!1.15e-07!448;UBERON:0000922!2.08e-07!612;UBERON:0001871!6.48e-07!7;UBERON:0000467!9.74e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.68e-09;15!UBERON:0000179;4.68e-09;15!UBERON:0000463;4.68e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.33e-103,76;UBERON:0002390,4.00e-102,98;UBERON:0003061,4.00e-102,98;UBERON:0001474,4.86e-95,82;UBERON:0002193,1.22e-91,108;UBERON:0004765,1.19e-85,90;UBERON:0002405,1.52e-82,93;UBERON:0001434,5.23e-76,100;UBERON:0003081,3.01e-43,203;UBERON:0002204,5.50e-41,167;UBERON:0000926,1.65e-23,315;UBERON:0004120,1.65e-23,315;UBERON:0006603,1.65e-23,315;UBERON:0002384,3.60e-17,371;UBERON:0000178,4.47e-09,15;UBERON:0000179,4.47e-09,15;UBERON:0000463,4.47e-09,15;UBERON:0000923,1.49e-07,560;UBERON:0010316,1.49e-07,560;UBERON:0005291,1.49e-07,560;UBERON:0006598,1.49e-07,560;UBERON:0010317,1.49e-07,560;UBERON:0002532,1.49e-07,560;UBERON:0002050,2.08e-07,564;UBERON:0005423,8.05e-07,581 | |||
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|short_description=p1@CYP1B1-AS1 | |short_description=p1@CYP1B1-AS1 | ||
}} | }} |
Latest revision as of 03:51, 17 September 2015
Short description: | p1@CYP1B1-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CYP1B1-AS1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -2bp_to_ENST00000413828, NR_027252, uc010faj.1_5end |
EntrezGene: | CYP1B1-AS1 |
HGNC: | 28543 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.33e-103 | 76 |
hematopoietic system | 4.00e-102 | 98 |
blood island | 4.00e-102 | 98 |
bone element | 4.86e-95 | 82 |
hemolymphoid system | 1.22e-91 | 108 |
skeletal element | 1.19e-85 | 90 |
immune system | 1.52e-82 | 93 |
skeletal system | 5.23e-76 | 100 |
lateral plate mesoderm | 3.01e-43 | 203 |
musculoskeletal system | 5.50e-41 | 167 |
mesoderm | 1.65e-23 | 315 |
mesoderm-derived structure | 1.65e-23 | 315 |
presumptive mesoderm | 1.65e-23 | 315 |
connective tissue | 3.60e-17 | 371 |
blood | 4.47e-09 | 15 |
haemolymphatic fluid | 4.47e-09 | 15 |
organism substance | 4.47e-09 | 15 |
germ layer | 1.49e-07 | 560 |
germ layer / neural crest | 1.49e-07 | 560 |
embryonic tissue | 1.49e-07 | 560 |
presumptive structure | 1.49e-07 | 560 |
germ layer / neural crest derived structure | 1.49e-07 | 560 |
epiblast (generic) | 1.49e-07 | 560 |
embryonic structure | 2.08e-07 | 564 |
developing anatomical structure | 8.05e-07 | 581 |