FFCP PHASE1:Hg19::chr20:55841403..55841458,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=655 | |EntrezGene=655 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1074 | |HGNC=1074 | ||
|TSSclassifier=strong | |||
|UniProt=B1AKZ9 | |UniProt=B1AKZ9 | ||
|association_with_transcript=-5bp_to_ENST00000395864_5end | |association_with_transcript=-5bp_to_ENST00000395864_5end | ||
|cluster_id=chr20:55841403..55841458,- | |||
|coexpression_cluster_id=C4050 | |||
|description=CAGE_peak_2_at_BMP7_5end | |description=CAGE_peak_2_at_BMP7_5end | ||
|id=chr20:55841403..55841458,- | |id=chr20:55841403..55841458,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.11e-14;82!UBERON:0002532;2.71e-07;206!UBERON:0010316;2.71e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!5.83e-41!86;UBERON:0007023!1.71e-39!115;UBERON:0000073!1.04e-38!94;UBERON:0001016!1.04e-38!94;UBERON:0001017!3.29e-38!82;UBERON:0001049!1.51e-35!57;UBERON:0005068!1.51e-35!57;UBERON:0006241!1.51e-35!57;UBERON:0007135!1.51e-35!57;UBERON:0002346!1.25e-34!90;UBERON:0003075!4.46e-33!86;UBERON:0007284!4.46e-33!86;UBERON:0000955!7.80e-32!69;UBERON:0006238!7.80e-32!69;UBERON:0002616!1.22e-29!59;UBERON:0002780!4.23e-28!41;UBERON:0001890!4.23e-28!41;UBERON:0006240!4.23e-28!41;UBERON:0000924!3.36e-27!173;UBERON:0006601!3.36e-27!173;UBERON:0003080!4.61e-27!42;UBERON:0004121!9.48e-26!169;UBERON:0000153!1.52e-25!129;UBERON:0007811!1.52e-25!129;UBERON:0003056!1.06e-24!61;UBERON:0000033!1.63e-24!123;UBERON:0001893!4.25e-24!34;UBERON:0002020!5.04e-24!34;UBERON:0003528!5.04e-24!34;UBERON:0002791!1.77e-23!33;UBERON:0001869!2.70e-22!32;UBERON:0000956!3.15e-17!25;UBERON:0000203!3.15e-17!25;UBERON:0002619!1.14e-15!22;UBERON:0000064!5.49e-15!219;UBERON:0001950!6.25e-14!20;UBERON:0000062!5.37e-12!511;UBERON:0000468!2.23e-11!659;UBERON:0000922!3.81e-11!612;UBERON:0000481!9.85e-11!347;UBERON:0000475!1.73e-10!365;UBERON:0003076!1.67e-09!15;UBERON:0003057!1.67e-09!15;UBERON:0002050!8.70e-09!605;UBERON:0005423!8.70e-09!605;UBERON:0000923!1.77e-08!604;UBERON:0005291!1.77e-08!604;UBERON:0006598!1.77e-08!604;UBERON:0002532!1.77e-08!604;UBERON:0004111!1.86e-08!241;UBERON:0002308!2.75e-08!9;UBERON:0000125!2.75e-08!9;UBERON:0004732!6.11e-08!13;UBERON:0002420!6.65e-08!9;UBERON:0007245!6.65e-08!9;UBERON:0010009!6.65e-08!9;UBERON:0010011!6.65e-08!9;UBERON:0000454!6.65e-08!9;UBERON:0000025!1.06e-07!194;UBERON:0000480!1.14e-07!626;UBERON:0000477!1.89e-07!286;UBERON:0000467!1.96e-07!625;UBERON:0004733!4.76e-07!12;UBERON:0002028!4.76e-07!12;UBERON:0007277!4.76e-07!12;UBERON:0009663!8.08e-07!7;UBERON:0005409!8.17e-07!35 | |ontology_enrichment_uberon=UBERON:0005743!5.83e-41!86;UBERON:0007023!1.71e-39!115;UBERON:0000073!1.04e-38!94;UBERON:0001016!1.04e-38!94;UBERON:0001017!3.29e-38!82;UBERON:0001049!1.51e-35!57;UBERON:0005068!1.51e-35!57;UBERON:0006241!1.51e-35!57;UBERON:0007135!1.51e-35!57;UBERON:0002346!1.25e-34!90;UBERON:0003075!4.46e-33!86;UBERON:0007284!4.46e-33!86;UBERON:0000955!7.80e-32!69;UBERON:0006238!7.80e-32!69;UBERON:0002616!1.22e-29!59;UBERON:0002780!4.23e-28!41;UBERON:0001890!4.23e-28!41;UBERON:0006240!4.23e-28!41;UBERON:0000924!3.36e-27!173;UBERON:0006601!3.36e-27!173;UBERON:0003080!4.61e-27!42;UBERON:0004121!9.48e-26!169;UBERON:0000153!1.52e-25!129;UBERON:0007811!1.52e-25!129;UBERON:0003056!1.06e-24!61;UBERON:0000033!1.63e-24!123;UBERON:0001893!4.25e-24!34;UBERON:0002020!5.04e-24!34;UBERON:0003528!5.04e-24!34;UBERON:0002791!1.77e-23!33;UBERON:0001869!2.70e-22!32;UBERON:0000956!3.15e-17!25;UBERON:0000203!3.15e-17!25;UBERON:0002619!1.14e-15!22;UBERON:0000064!5.49e-15!219;UBERON:0001950!6.25e-14!20;UBERON:0000062!5.37e-12!511;UBERON:0000468!2.23e-11!659;UBERON:0000922!3.81e-11!612;UBERON:0000481!9.85e-11!347;UBERON:0000475!1.73e-10!365;UBERON:0003076!1.67e-09!15;UBERON:0003057!1.67e-09!15;UBERON:0002050!8.70e-09!605;UBERON:0005423!8.70e-09!605;UBERON:0000923!1.77e-08!604;UBERON:0005291!1.77e-08!604;UBERON:0006598!1.77e-08!604;UBERON:0002532!1.77e-08!604;UBERON:0004111!1.86e-08!241;UBERON:0002308!2.75e-08!9;UBERON:0000125!2.75e-08!9;UBERON:0004732!6.11e-08!13;UBERON:0002420!6.65e-08!9;UBERON:0007245!6.65e-08!9;UBERON:0010009!6.65e-08!9;UBERON:0010011!6.65e-08!9;UBERON:0000454!6.65e-08!9;UBERON:0000025!1.06e-07!194;UBERON:0000480!1.14e-07!626;UBERON:0000477!1.89e-07!286;UBERON:0000467!1.96e-07!625;UBERON:0004733!4.76e-07!12;UBERON:0002028!4.76e-07!12;UBERON:0007277!4.76e-07!12;UBERON:0009663!8.08e-07!7;UBERON:0005409!8.17e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.07e-25;34!UBERON:0003528;3.64e-24;34!UBERON:0002020;3.64e-24;34!UBERON:0002791;5.39e-24;32!UBERON:0001869;8.18e-24;32!UBERON:0002780;2.49e-22;41!UBERON:0001890;2.49e-22;41!UBERON:0000073;4.29e-20;53!UBERON:0002616;4.29e-20;53!UBERON:0000956;1.01e-19;25!UBERON:0000203;1.01e-19;25!UBERON:0002619;1.14e-17;22!UBERON:0001950;1.62e-15;20!UBERON:0001017;3.69e-15;75!UBERON:0000955;5.26e-15;68!UBERON:0001016;9.13e-13;83!UBERON:0000922;6.67e-11;49!UBERON:0000125;4.46e-10;9!UBERON:0002308;4.46e-10;9!UBERON:0002420;1.46e-09;9!UBERON:0007245;1.46e-09;9!UBERON:0010009;1.46e-09;9!UBERON:0010011;1.46e-09;9!UBERON:0000454;1.46e-09;9!UBERON:0007023;3.22e-08;114!UBERON:0009663;3.30e-08;7!UBERON:0002298;9.40e-08;6!UBERON:0004732;2.34e-07;13!UBERON:0000974;9.37e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.41e-39,56;UBERON:0005068,9.41e-39,56;UBERON:0006241,9.41e-39,56;UBERON:0007135,9.41e-39,56;UBERON:0001017,1.16e-36,81;UBERON:0000073,1.77e-35,53;UBERON:0002616,1.77e-35,53;UBERON:0001016,2.40e-35,89;UBERON:0007023,3.36e-31,114;UBERON:0000955,4.28e-31,68;UBERON:0006238,4.28e-31,68;UBERON:0002346,7.86e-31,86;UBERON:0002780,1.12e-30,41;UBERON:0001890,1.12e-30,41;UBERON:0003080,1.12e-30,41;UBERON:0006240,1.12e-30,41;UBERON:0003075,7.31e-29,82;UBERON:0007284,7.31e-29,82;UBERON:0001893,2.15e-28,34;UBERON:0003528,2.64e-28,34;UBERON:0002020,2.64e-28,34;UBERON:0002791,2.04e-26,32;UBERON:0001869,3.82e-26,32;UBERON:0004121,1.86e-23,171;UBERON:0000924,1.86e-23,171;UBERON:0006601,1.86e-23,171;UBERON:0010371,3.81e-23,104;UBERON:0003056,5.24e-22,61;UBERON:0000956,8.48e-20,25;UBERON:0000203,8.48e-20,25;UBERON:0010314,1.71e-19,132;UBERON:0002619,7.98e-18,22;UBERON:0011216,7.12e-16,223;UBERON:0001950,1.14e-15,20;UBERON:0000125,4.98e-10,9;UBERON:0002308,4.98e-10,9;UBERON:0002420,1.51e-09,9;UBERON:0007245,1.51e-09,9;UBERON:0010009,1.51e-09,9;UBERON:0010011,1.51e-09,9;UBERON:0000454,1.51e-09,9;UBERON:0003076,3.45e-09,15;UBERON:0003057,3.45e-09,15;UBERON:0004111,1.80e-08,240;UBERON:0009663,3.47e-08,7;UBERON:0000025,3.61e-08,192;UBERON:0002298,1.03e-07,6;UBERON:0000922,1.51e-07,592;UBERON:0004732,2.46e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0.940364164434263,3.43483184557268,1.50561867580173,3.38965126905968,0,0,0,0,0,0,0,0,0,15.4934401160603,4.83375390457233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.443458794925128,0,1.44076983047484,0,0.370784442784429,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.908144565869588,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0.500474079487857,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14710600840624,3.18071443971565,5.34492137199785,4.14644220061482,2.77552935963191,4.37972830890996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,2.09080345523293,0.171567810298526,0,0,0,0,0,0,0,0.695582429850461,0.117408694235822,0,0,0,53.7338990612307,52.3676558877872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.11464947822898,1.30139853857622,0,0.837581326671744,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.438675231623,0,0,0,0,0.131124414959424,2.70719767744447,2.31046011313244,3.92174884588428,0,0.316654886678627,0,0,0,0,0.541892875087706,5.51858751240339,0,0.831076008928724,0,0,0,5.89835287767695,0.984043937099117,1.62689197332152,4.12164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.89547764039252,0,0,0,0,0,0,0,0,0,0,0,0,6.19579612539344,3.84991942105343,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9488432172667,0,0,0,0,0,0.146508179271894,2.54857095673978,0,6.81926752335391,0.23874448473769,0,0,2.98244294329889,3.37606599385231,0,0,0,0.796991953004279,1.93398740871803,0,0,0,0,0,0,0,0.986434056369336,0,0,9.69332746095218,4.26733251544516,1.99613798001194,22.6572152144153,0,0,16.2724631048264,0,12.7649348154686,2.41320361269025,0,0.173624994933292,7.08593108651071,3.73848959738765,1.52581736317083,1.43753037910592,1.77328571372128,2.85201016300164,0,13.8029506835817,3.69361240818226,0,0,0,2.06430006651815,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,21.0616076436572,0.432777279484182,0.995261931078505,0.176915129006678,0.611030144933625,3.55825354416746,15.9397481240989,14.9323387792801,11.2559892077731,0,6.5594044803095,0.729819156862664,3.13063390291344,4.61282721114776,5.52418163989147,3.62972148145992,1.53036380815245,0.568679216656392,3.90840890477681,6.94710882361556,0.664653872707185,0,1.2557316736289,0,0,0,1.73559738335131,4.99761226813326,0,11.881413440458,0,0,0,0,10.7657808302146,0,3.61569185248852,0,0,3.48209377757333,5.27988733383968,0,1.70762395791482,4.59562102038899,7.78088252632172,3.32156128881155,0,0,0,3.06402245001834,0.407712618220842,0.523014231561666,4.79391622890712,0,7.80546375322726,4.38097212454378,0,0,5.5206344398656,3.0721064139948,1.60412296808179,0,5.99037001496973,0.429226048136571,0.223171457441873,6.11369599629209,0,5.82479747637269,0,0,0,0,0,8.74752658790234,6.26535668113248,1.92903778158023,2.06309154895851,1.24632101408756,0,1.5476039091159,4.6777158626679,18.7843425055589,0.157611414598396,5.5601863423098,0,0,0,4.2881719582402,1.32418394073086,0,0,0,0,0,0,0,0.566560457600628,0,0,7.11056259988528,3.57028024705263,0,0,0.106787412567695,0.78602152549833,0,0,1.38328142328561,3.0448149595224,1.91502377331055,0,0,0.306345576763462,0,12.8784358925192,1.77213635993397,2.56255156294123,4.75725536684699,9.74795632673121,5.21366542223206,9.99752087356273,8.71596400098254,0,0,1.14186133417987,0,8.43002830452387,8.55034068803868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.73297777609673,0,0,0,0,0,0,3.9997479170986,0,0,0,0,0,0,0,1.50954735955355,0,6.33415901513681,5.94063854839088,1.91317428091515,0,0,0,0,0,0,0.6124909547064,4.36758730655925,5.6678630530234,3.67157875831448,3.48697819209284,0.756215088665154,3.94196339046042,4.35984243205998,11.4215536207324,7.55737432457897,6.84224395416894,3.85200056895526,2.65709032145778,0,5.52287940848081,3.97832444232549,0.601682626794058,0,0,0,0,0,3.57949198477492,4.68646859168308,2.68692835451539,3.86836442182832,2.18789923607288,0,3.47347824872506,21.6321630562333,0.766574565837572,2.67850917939143,1.3451348888753,0.606965604236632,0.227662191351298,6.74138013236055,0,0,4.62194184242456,4.01213918733379,0.118193840883968,0,2.98273752831953,3.61365856806804,3.64353812307926,2.73947616152849,0,0,22.2292052389401,0.316027223465453,0,1.21700790611806,0,0,0,0,0.430227358820278,0,0,2.11693525095465,7.3314197934096,0,0,9.17214540741897,0,0,0,0,2.3196288626764,2.91426595835484,18.4812176135063,9.35068643258431,0.237840181555137,4.85668152767528,0,0,0.463044948647668,0.655678681511872,0,0.490296643507811,0,6.47817941479319,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| ||
|short_description=p2@BMP7 | |short_description=p2@BMP7 | ||
}} | }} |
Latest revision as of 03:50, 17 September 2015
Short description: | p2@BMP7 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BMP7_5end |
Coexpression cluster: | C4050_MCF7_Burkitt_keratoacanthoma_colon_small_synovial_peripheral |
Association with transcript: | -5bp_to_ENST00000395864_5end |
EntrezGene: | BMP7 |
HGNC: | 1074 |
UniProt: | B1AKZ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data