FFCP PHASE1:Hg19::chr7:150434430..150434441,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100527949,55340 | |EntrezGene=100527949,55340 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18005 | |HGNC=18005 | ||
|TSSclassifier=strong | |||
|UniProt=Q96F15 | |UniProt=Q96F15 | ||
|association_with_transcript=0bp_to_ENST00000358647,NM_018384_5end | |association_with_transcript=0bp_to_ENST00000358647,NM_018384_5end | ||
|cluster_id=chr7:150434430..150434441,+ | |||
|coexpression_cluster_id=C2885 | |coexpression_cluster_id=C2885 | ||
|description=CAGE_peak_6_at_GIMAP5_5end | |description=CAGE_peak_6_at_GIMAP5_5end | ||
|id=chr7:150434430..150434441,+ | |id=chr7:150434430..150434441,+ | ||
|ontology_enrichment_celltype=CL:0000625;1.01e-16;11!CL:0000791;4.80e-15;18!CL:0000789;4.80e-15;18!CL:0002419;4.80e-15;18!CL:0000084;8.54e-15;25!CL:0000473;9.75e-12;39!CL:0000234;9.75e-12;39!CL:0000576;2.46e-09;48!CL:0000860;2.77e-09;33!CL:0002057;2.77e-09;33!CL:0002619;3.81e-09;3!CL:0000235;1.77e-07;6 | |ontology_enrichment_celltype=CL:0002087!9.78e-32!119;CL:0002031!2.48e-28!124;CL:0000738!2.53e-25!140;CL:0002194!1.00e-23!63;CL:0000576!1.00e-23!63;CL:0000040!1.00e-23!63;CL:0000559!1.00e-23!63;CL:0002009!1.71e-22!65;CL:0000037!6.82e-22!172;CL:0000566!6.82e-22!172;CL:0002032!8.78e-22!165;CL:0000837!8.78e-22!165;CL:0000839!1.17e-21!70;CL:0000557!4.04e-21!71;CL:0000988!5.54e-20!182;CL:0000766!1.17e-18!76;CL:0002057!1.21e-18!42;CL:0000860!1.26e-16!45;CL:0000791!5.56e-16!18;CL:0000789!5.56e-16!18;CL:0002420!5.56e-16!18;CL:0002419!5.56e-16!18;CL:0000790!5.56e-16!18;CL:0000084!1.60e-15!25;CL:0000827!1.60e-15!25;CL:0000763!1.02e-13!112;CL:0000049!1.02e-13!112;CL:0000625!5.92e-10!11;CL:0000838!2.38e-08!52;CL:0000542!4.88e-08!53;CL:0000051!4.88e-08!53;CL:0000115!3.91e-07!35 | ||
| | |ontology_enrichment_celltype_v019=CL:0000625;1.01e-16;11!CL:0000791;4.80e-15;18!CL:0000789;4.80e-15;18!CL:0002419;4.80e-15;18!CL:0000084;8.54e-15;25!CL:0000473;9.75e-12;39!CL:0000234;9.75e-12;39!CL:0000576;2.46e-09;48!CL:0000860;2.77e-09;33!CL:0002057;2.77e-09;33!CL:0002619;3.81e-09;3!CL:0000235;1.77e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002087,2.87e-18,115;CL:0002031,3.76e-17,120;CL:0000625,7.33e-17,11;CL:0000791,4.08e-15,18;CL:0000789,4.08e-15,18;CL:0002420,4.08e-15,18;CL:0002419,4.08e-15,18;CL:0000790,4.08e-15,18;CL:0000084,7.07e-15,25;CL:0000827,7.07e-15,25;CL:0000738,3.84e-14,136;CL:0002194,1.55e-13,59;CL:0000576,1.55e-13,59;CL:0000040,1.55e-13,59;CL:0000559,1.55e-13,59;CL:0002009,6.16e-13,61;CL:0000839,1.34e-11,66;CL:0000557,2.35e-11,67;CL:0000473,3.59e-11,48;CL:0000234,3.59e-11,48;CL:0002032,1.12e-10,161;CL:0000837,1.12e-10,161;CL:0000766,3.05e-10,72;CL:0000037,6.71e-10,168;CL:0002619,4.85e-09,3;CL:0000988,5.36e-09,177;CL:0000235,1.44e-07,6;CL:0000860,3.51e-07,42;CL:0002057,3.51e-07,42;CL:0000893,5.67e-07,2;CL:0002489,5.67e-07,2;CL:0000809,5.67e-07,2;CL:0000808,5.67e-07,2;CL:0000894,5.67e-07,2;CL:0000806,5.67e-07,2;CL:0000807,5.67e-07,2;CL:0000805,5.67e-07,2;CL:0002425,5.67e-07,2;CL:0000115,8.09e-07,36;CL:0000838,9.01e-07,52 | |||
|ontology_enrichment_development_v019=CL:0000790;4.80e-15;18!CL:0002425;4.88e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.21e-30!112;UBERON:0002390!1.15e-25!102;UBERON:0003061!1.15e-25!102;UBERON:0002405!3.35e-23!115;UBERON:0002371!4.72e-18!80;UBERON:0001474!1.13e-15!86;UBERON:0003081!1.48e-13!216;UBERON:0007023!7.04e-13!115;UBERON:0004765!9.57e-12!101;UBERON:0001434!9.57e-12!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.46e-21,108;UBERON:0002390,2.56e-16,98;UBERON:0003061,2.56e-16,98;UBERON:0002405,6.15e-16,93;UBERON:0002371,1.32e-10,76;UBERON:0001474,1.79e-09,82;UBERON:0003081,1.90e-08,203;UBERON:0004765,3.31e-08,90;UBERON:0001434,6.38e-07,100;UBERON:0002465,9.53e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,3.80656306207871,1.29557466407592,2.06060454107349,0.581592955118259,0.377875943688809,0.970336244751265,0.697287110717054,0.822335776043652,1.85823822537062,3.16461631554365,3.58624989140741,3.07426898855161,0.344745680736619,0.645484683583826,1.35426486594342,0,0,0.224723484445085,0.612167784741805,0,0,1.64925650093358,2.99195486432448,4.26224750532694,0.290209238628584,1.70215567407342,0.622822248995575,2.26123798731069,2.08593167368081,3.69221035998698,0.605399502633369,0.368277635987565,0.316462387440884,0.211255286311942,0.212604299965044,0.209658645508376,0.44931452458598,0.150176892841506,0,0,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983548850569165,0.786021525498329,0.616804496998528,1.17030546773475,0.977766799900771,1.4203434172042,1.94826728407911,3.23090324967003,0.883817722424512,1.10766947291811,1.08321545506006,4.35510487067296,3.12142434143708,3.94650971048823,6.63240042686036,4.05724320029073,5.19002971067211,2.94294910898684,4.18142095219907,2.49280553934646,4.21542542962113,2.74901956386104,2.02415753615602,7.00843911513013,3.25541726928209,4.75226022224187,3.46322773878877,4.22355816809581,2.49861453104692,2.8413270245282,4.92676798152628,0.201606743224732,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0.324547393654683,0.348259474598534,0.930705723632056,0,0,0,0,0,0,0,0,0,0.417989933073621,0.775250277507987,0.71153252537342,0.33472061276467,0.805658634218294,1.52054421143703,1.95249646038536,0.367663080345869,0,0.357198913136319,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,2.30986316417718,1.85194205030644,1.52203321787679,0,0,1.72351904261178,0.468008530278475,1.63494278517601,0,0,0,0,0,0,0,0,0,0.288239906833923,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0,2.10833939483032,0,0,0,0,0,0,2.12961773587702,0,0.431255149719035,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850468526382578,0.431831832204279,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,2.27858874869665,3.57347663186684,1.64544909234478,2.59389324477087,3.24018862342869,3.17250070517708,0,0,0,0,0,0.213425530045242,6.37705090915289,0,0,0,0.324621940274555,0.280797178113459,0,0.313359791546046,0,0,0.321176150207399,0.403599414382095,0,0,0.614481528616916,0.223676107892416,1.16794399198336,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0.296964680832639,0,0,0,0,0.16480387422676,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0,0.638002319463839,0,0,0,0.31396051279005,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,1.37588825977293,0,0,0,0.387956065953678,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,1.11712960508902,0.229160424011684,0.717873024576814,0,0.429226048136571,0.446342914883745,0.335917362433631,0,0,0,0,0,0,0.169346664131569,0,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0.472834243795189,0.419636705079985,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.26446520348538,0,0,0.533937062838473,0.471612915298998,0.828478110694391,4.46549419630756,0.197611631897944,0,0,0,0.5013797880454,0,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,1.59989916683944,0,1.72214979660816,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0.159633859057151,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0.376051641746286,0.40341013740704,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.235479278551542,0.157115589916002,0,0,1.07963795609311,0,0.214429632529969,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.098150233615243,0,0.647428837187895,0.307988420568741,0,0,0,0,0,0,0,0.150962843566674,0.308696632431779,0.437119121007915,0,0.245148321753905,0,0,0.297046400327086,2.113278637917,0,0.845855261818682,0.902410431630081,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0.193766729508018,0.248298857183432,0,0.381882949668989,0.606351566874658,0.653150243690884,1.02669990325584,1.27968900727716,0.358611026963382,0.332660356546013,0,0,0,0,0,0.733448665097199,0,0,1.40891655513718,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,3.80656306207871,1.29557466407592,2.06060454107349,0.581592955118259,0.377875943688809,0.970336244751265,0.697287110717054,0.822335776043652,1.85823822537062,3.16461631554365,3.58624989140741,3.07426898855161,0.344745680736619,0.645484683583826,1.35426486594342,0,0,0.224723484445085,0.612167784741805,0,0,1.64925650093358,2.99195486432448,4.26224750532694,0.290209238628584,1.70215567407342,0.622822248995575,2.26123798731069,2.08593167368081,3.69221035998698,0.605399502633369,0.368277635987565,0.316462387440884,0.211255286311942,0.212604299965044,0.209658645508376,0.44931452458598,0.150176892841506,0,0,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983548850569165,0.786021525498329,0.616804496998528,1.17030546773475,0.977766799900771,1.4203434172042,1.94826728407911,3.23090324967003,0.883817722424512,1.10766947291811,1.08321545506006,4.35510487067296,3.12142434143708,3.94650971048823,6.63240042686036,4.05724320029073,5.19002971067211,2.94294910898684,4.18142095219907,2.49280553934646,4.21542542962113,2.74901956386104,2.02415753615602,7.00843911513013,3.25541726928209,4.75226022224187,3.46322773878877,4.22355816809581,2.49861453104692,2.8413270245282,4.92676798152628,0.201606743224732,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0.324547393654683,0.348259474598534,0.930705723632056,0,0,0,0,0,0,0,0,0,0.417989933073621,0.775250277507987,0.71153252537342,0.33472061276467,0.805658634218294,1.52054421143703,1.95249646038536,0.367663080345869,0,0.357198913136319,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,2.30986316417718,1.85194205030644,1.52203321787679,0,0,1.72351904261178,0.468008530278475,1.63494278517601,0,0,0,0,0,0,0,0,0,0.288239906833923,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0,2.10833939483032,0,0,0,0,0,0,2.12961773587702,0,0.431255149719035,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850468526382578,0.431831832204279,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,2.27858874869665,3.57347663186684,1.64544909234478,2.59389324477087,3.24018862342869,3.17250070517708,0,0,0,0,0,0.213425530045242,6.37705090915289,0,0,0,0.324621940274555,0.280797178113459,0,0.313359791546046,0,0,0.321176150207399,0.403599414382095,0,0,0.614481528616916,0.223676107892416,1.16794399198336,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0.296964680832639,0,0,0,0,0.16480387422676,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0,0.638002319463839,0,0,0,0.31396051279005,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,1.37588825977293,0,0,0,0.387956065953678,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,1.11712960508902,0.229160424011684,0.717873024576814,0,0.429226048136571,0.446342914883745,0.335917362433631,0,0,0,0,0,0,0.169346664131569,0,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0.472834243795189,0.419636705079985,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.26446520348538,0,0,0.533937062838473,0.471612915298998,0.828478110694391,4.46549419630756,0.197611631897944,0,0,0,0.5013797880454,0,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,1.59989916683944,0,1.72214979660816,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0.159633859057151,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0.376051641746286,0.40341013740704,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.235479278551542,0.157115589916002,0,0,1.07963795609311,0,0.214429632529969,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.098150233615243,0,0.647428837187895,0.307988420568741,0,0,0,0,0,0,0,0.150962843566674,0.308696632431779,0.437119121007915,0,0.245148321753905,0,0,0.297046400327086,2.113278637917,0,0.845855261818682,0.902410431630081,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0.193766729508018,0.248298857183432,0,0.381882949668989,0.606351566874658,0.653150243690884,1.02669990325584,1.27968900727716,0.358611026963382,0.332660356546013,0,0,0,0,0,0.733448665097199,0,0,1.40891655513718,0.641136984606466 | ||
|short_description=p6@GIMAP5 | |short_description=p6@GIMAP5 | ||
}} | }} |
Latest revision as of 03:44, 17 September 2015
Short description: | p6@GIMAP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GIMAP5_5end |
Coexpression cluster: | C2885_CD14_Endothelial_Hepatic_lymph_Lymphatic_CD4_Macrophage |
Association with transcript: | 0bp_to_ENST00000358647, NM_018384_5end |
EntrezGene: | 100527949,55340 |
HGNC: | 18005 |
UniProt: | Q96F15 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.46e-21 | 108 |
hematopoietic system | 2.56e-16 | 98 |
blood island | 2.56e-16 | 98 |
immune system | 6.15e-16 | 93 |
bone marrow | 1.32e-10 | 76 |
bone element | 1.79e-09 | 82 |
lateral plate mesoderm | 1.90e-08 | 203 |
skeletal element | 3.31e-08 | 90 |
skeletal system | 6.38e-07 | 100 |
lymphoid system | 9.53e-07 | 10 |