FFCP PHASE1:Hg19::chr2:38303286..38303301,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1545 | |EntrezGene=1545 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2597 | |HGNC=2597 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000462864,ENST00000490576_5end | |association_with_transcript=0bp_to_ENST00000462864,ENST00000490576_5end | ||
|cluster_id=chr2:38303286..38303301,- | |||
|coexpression_cluster_id=C667 | |coexpression_cluster_id=C667 | ||
|description=CAGE_peak_1_at_CYP1B1_5end | |description=CAGE_peak_1_at_CYP1B1_5end | ||
|id=chr2:38303286..38303301,- | |id=chr2:38303286..38303301,- | ||
|ontology_enrichment_celltype=CL:0002194!1.22e-13!63;CL:0000576!1.22e-13!63;CL:0000040!1.22e-13!63;CL:0000559!1.22e-13!63;CL:0002057!5.38e-13!42;CL:0002009!1.99e-12!65;CL:0000839!6.17e-12!70;CL:0000860!2.24e-11!45;CL:0000557!5.16e-11!71;CL:0000766!4.10e-10!76;CL:0000055!7.57e-07!180 | |ontology_enrichment_celltype=CL:0002194!1.22e-13!63;CL:0000576!1.22e-13!63;CL:0000040!1.22e-13!63;CL:0000559!1.22e-13!63;CL:0002057!5.38e-13!42;CL:0002009!1.99e-12!65;CL:0000839!6.17e-12!70;CL:0000860!2.24e-11!45;CL:0000557!5.16e-11!71;CL:0000766!4.10e-10!76;CL:0000055!7.57e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.40e-17;33!CL:0002057;1.40e-17;33!CL:0000473;2.19e-17;39!CL:0000234;2.19e-17;39!CL:0000576;2.39e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.13e-16,48;CL:0000234,2.13e-16,48;CL:0002194,6.28e-15,59;CL:0000576,6.28e-15,59;CL:0000040,6.28e-15,59;CL:0000559,6.28e-15,59;CL:0002009,1.67e-13,61;CL:0000860,2.18e-13,42;CL:0002057,2.18e-13,42;CL:0000839,1.39e-12,66;CL:0000557,9.99e-12,67;CL:0000766,8.21e-11,72;CL:0000057,9.62e-07,76 | |||
|ontology_enrichment_development_v019=CL:0002057;1.56e-10;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.05e-16!167;UBERON:0004765!3.80e-13!101;UBERON:0001434!3.80e-13!101;UBERON:0000468!7.72e-12!659;UBERON:0002371!1.39e-11!80;UBERON:0001474!2.59e-11!86;UBERON:0000062!1.51e-10!511;UBERON:0002390!8.64e-09!102;UBERON:0003061!8.64e-09!102;UBERON:0000467!3.21e-08!625;UBERON:0000480!5.35e-08!626;UBERON:0000922!2.29e-07!612;UBERON:0000926!2.78e-07!448;UBERON:0004120!2.78e-07!448;UBERON:0006603!2.78e-07!448;UBERON:0002193!2.84e-07!112;UBERON:0002050!4.60e-07!605;UBERON:0005423!4.60e-07!605;UBERON:0000923!7.04e-07!604;UBERON:0005291!7.04e-07!604;UBERON:0006598!7.04e-07!604;UBERON:0002532!7.04e-07!604 | |ontology_enrichment_uberon=UBERON:0002204!3.05e-16!167;UBERON:0004765!3.80e-13!101;UBERON:0001434!3.80e-13!101;UBERON:0000468!7.72e-12!659;UBERON:0002371!1.39e-11!80;UBERON:0001474!2.59e-11!86;UBERON:0000062!1.51e-10!511;UBERON:0002390!8.64e-09!102;UBERON:0003061!8.64e-09!102;UBERON:0000467!3.21e-08!625;UBERON:0000480!5.35e-08!626;UBERON:0000922!2.29e-07!612;UBERON:0000926!2.78e-07!448;UBERON:0004120!2.78e-07!448;UBERON:0006603!2.78e-07!448;UBERON:0002193!2.84e-07!112;UBERON:0002050!4.60e-07!605;UBERON:0005423!4.60e-07!605;UBERON:0000923!7.04e-07!604;UBERON:0005291!7.04e-07!604;UBERON:0006598!7.04e-07!604;UBERON:0002532!7.04e-07!604 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.02e-18,167;UBERON:0001434,1.06e-14,100;UBERON:0004765,5.14e-13,90;UBERON:0002371,2.21e-12,76;UBERON:0001474,6.35e-12,82;UBERON:0000926,2.04e-10,315;UBERON:0004120,2.04e-10,315;UBERON:0006603,2.04e-10,315;UBERON:0002390,3.48e-09,98;UBERON:0003061,3.48e-09,98;UBERON:0002405,4.68e-09,93;UBERON:0002193,2.41e-07,108;UBERON:0002050,3.78e-07,564;UBERON:0000923,5.98e-07,560;UBERON:0010316,5.98e-07,560;UBERON:0005291,5.98e-07,560;UBERON:0006598,5.98e-07,560;UBERON:0010317,5.98e-07,560;UBERON:0002532,5.98e-07,560 | |||
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|phase1_expression=125.721438455225,63.587855595622,117.415018611944,78.0571727154417,73.7485805805025,37.5105565363159,50.6599756336621,22.7419154433659,13.5816526663916,1.47440361900905,0.697801167972428,0.218441372130172,0.263766978228454,23.763139768329,34.7967244514312,7.39557661096953,3.61616716814386,2.92124036154949,4.87932798790507,4.55547914884115,12.0360407834109,23.1956493893785,2.28988789704845,2.46373965131192,0,0.0764134057479513,0,0,7.47392126012918,8.44424675813868,14.7075317150272,0,0.90361775633475,5.9160641626686,0,0,0,2.76997704265939,6.21687787157439,6.51032612147556,130.542721481876,165.833557001718,211.211965460033,275.965857203614,205.564513366712,175.388276238791,206.861842846059,224.908834747939,172.196742217678,697.366358988893,568.932929201133,353.304451453546,109.284380793508,64.5484683583826,51.4620649058499,213.466813041314,202.769269492979,126.069874773692,153.654113970193,143.455275103014,113.16267126643,704.232525898639,617.340020338951,482.48641760301,154.681524189035,172.485108306106,142.003472770991,540.435878967255,347.307623667854,244.989016827372,138.636486103041,106.432236800406,75.0015858234896,1.05627643155971,1.91343869968539,1.46761051855863,11.569849008089,6.90813707070929,8.67918168164233,0,0,1.0959849225878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0.205601498999509,0,0,0,0,0.779873198196215,0,0,0,1.0247305578054,2.73124629875744,10.1951500854279,9.119550586933,3.18783394308558,0,0,0,7.25179793264424,0,0,0,0,0,0,0.451725357233318,0,0,1.89421801635213,0,0,0,0,36.5710299470943,26.1573335284418,10.2290049474824,176.382306363668,201.537840075628,287.230647099313,39.764297352555,95.8670694496193,141.802225746102,86.4744650103999,111.023169116111,12.7049703232781,2.91436230634034,7.78647329847302,146.695421931917,124.328632431677,84.1623890084416,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0.805658634218294,0,0,0,0,0,0,0,0,0,0,0,0,11.7745394078484,162.509828204369,14.0559867947684,54.6849916758594,64.2514030477343,38.6588536596209,70.0847000177884,0,15.0467204534468,8.71390899119346,2.82892411346345,1.30769522490767,64.1755493214509,85.8502127475198,15.6995359328644,8.11616199758833,4.56377457235559,5.23070381931304,2.58355897016283,1.45685649931318,0.702254033511242,11.6367877615289,1.22834317311768,41.6402898138335,51.0841228631283,71.9546764200601,3.64064544775211,5.03032699271367,2.02003336744879,2.75260743718321,8.58898758000967,89.1124570388101,116.465362403627,80.0768853972161,4.99101605904093,17.2214050261307,45.914838595992,33.9091041855299,19.5059212454861,27.4119727774247,18.034837803194,16.3782833571799,19.5780545399869,7.60008640257349,25.7482449728997,31.2049156397395,16.1646056818812,7.81021103536552,3.72782763442269,6.61286310010902,0.773043412653187,1.90922284413584,0.860413786167011,1.95157929807353,1.19276791489337,5.6935032006064,5.80501908086074,5.2987378683882,0,84.4827474581006,43.0971428589233,5.52539685409922,53.8666796517096,153.760329595622,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,6.9967581926338,2.94017422771084,7.60530208930985,2.94848165003288,5.31710916013264,0,0,53.3575890028415,0.878002283269004,0,0.502644862058154,2.31471112896324,2.93227474779292,1.03993478527958,24.5363281442965,40.807502551227,28.295495310833,0.144366447761074,0,0.190254152234598,15.8040879591855,17.1697232418975,79.7743099723167,319.883830445338,229.783776898374,14.0600750980165,1.84780341018745,2.26840155587818,3.94057499892532,2.03443756959773,0.766765358330422,36.9497428421958,85.7591747288822,0.414656231081544,0,0.50496973370552,3.11139682031628,3.4378958300245,0,17.1072446022705,2.05654985406647,0,3.71574362419752,16.7075315674587,37.9285259884954,33.9556263350999,15.3833341751756,35.7656445851882,5.917119267892,0,0,9.25946547343712,11.3479305618623,6.92697665441858,21.0177650677477,2.71310802695722,9.05564370458846,2.60588947434988,22.7450847195229,11.8792780940014,84.4030255766841,202.195762395268,86.0767454077511,71.7580305783024,50.7279662346448,90.6585939777036,48.6438456647913,97.6326454589968,0,8.83165970672233,20.7531085775887,5.72995082367666,0,0,0,0.641715181398742,1.77866236955724,3.90419561572865,0.773288812777695,0.837581326671744,0.637938751653163,0,0,0.414415513436035,85.5159697282405,69.0235319062354,13.8345162086865,39.3064928293225,70.8363085524732,60.8731322030988,37.8366770426464,49.0542142556182,61.4000260951159,33.1113828136016,26.5690239414175,30.9740203150061,1.73767228936166,8.2236486134351,16.8140277667319,1.86091223510599,2.37285620900479,0.74709290462411,1.21251028578504,9.98612637062982,9.07170879989041,145.639283189622,303.854707110364,137.804106366639,190.030358346205,216.452166355216,304.818180567136,90.5350205314445,1.07946785661859,11.8966355959795,10.758657437809,30.11675689265,5.46188778761808,0,2.20557117333613,18.0478738314357,20.3221573251354,8.92246723232913,24.5202655974123,0,3.15762882128101,1.56869953835371,1.46139224653261,5.06647818685803,0,0.170093705276516,1.51141141271498,0,6.50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| ||
|short_description=p1@CYP1B1 | |short_description=p1@CYP1B1 | ||
}} | }} |
Latest revision as of 03:42, 17 September 2015
Short description: | p1@CYP1B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CYP1B1_5end |
Coexpression cluster: | C667_CD14_tenocyte_Synoviocyte_Smooth_dura_Preadipocyte_Macrophage |
Association with transcript: | 0bp_to_ENST00000462864, ENST00000490576_5end |
EntrezGene: | CYP1B1 |
HGNC: | 2597 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.13e-16 | 48 |
phagocyte | 2.13e-16 | 48 |
monopoietic cell | 6.28e-15 | 59 |
monocyte | 6.28e-15 | 59 |
monoblast | 6.28e-15 | 59 |
promonocyte | 6.28e-15 | 59 |
macrophage dendritic cell progenitor | 1.67e-13 | 61 |
classical monocyte | 2.18e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.18e-13 | 42 |
myeloid lineage restricted progenitor cell | 1.39e-12 | 66 |
granulocyte monocyte progenitor cell | 9.99e-12 | 67 |
myeloid leukocyte | 8.21e-11 | 72 |
fibroblast | 9.62e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 2.02e-18 | 167 |
skeletal system | 1.06e-14 | 100 |
skeletal element | 5.14e-13 | 90 |
bone marrow | 2.21e-12 | 76 |
bone element | 6.35e-12 | 82 |
mesoderm | 2.04e-10 | 315 |
mesoderm-derived structure | 2.04e-10 | 315 |
presumptive mesoderm | 2.04e-10 | 315 |
hematopoietic system | 3.48e-09 | 98 |
blood island | 3.48e-09 | 98 |
immune system | 4.68e-09 | 93 |
hemolymphoid system | 2.41e-07 | 108 |
embryonic structure | 3.78e-07 | 564 |
germ layer | 5.98e-07 | 560 |
germ layer / neural crest | 5.98e-07 | 560 |
embryonic tissue | 5.98e-07 | 560 |
presumptive structure | 5.98e-07 | 560 |
germ layer / neural crest derived structure | 5.98e-07 | 560 |
epiblast (generic) | 5.98e-07 | 560 |