FFCP PHASE1:Hg19::chr1:152627927..152627931,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=31825 | |HGNC=31825 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-21bp_to_ENST00000444515,ENST00000536536_5end | |association_with_transcript=-21bp_to_ENST00000444515,ENST00000536536_5end | ||
|cluster_id=chr1:152627927..152627931,+ | |||
|coexpression_cluster_id=C208 | |coexpression_cluster_id=C208 | ||
|description=CAGE_peak_1_at_LINC00302_5end | |description=CAGE_peak_1_at_LINC00302_5end | ||
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|ontology_enrichment_celltype=CL:0000362!5.38e-13!8;CL:0002159!5.23e-11!13;CL:0000317!1.54e-09!2;CL:1000448!1.54e-09!2;CL:0002308!1.54e-09!2;CL:0002140!1.54e-09!2;CL:0000622!2.25e-08!5;CL:0000312!4.56e-08!5;CL:0000154!4.88e-07!6;CL:0000240!8.74e-07!6;CL:0000311!8.74e-07!6;CL:0000079!8.74e-07!6;CL:0000237!8.74e-07!6;CL:0000036!8.74e-07!6;CL:0000357!8.74e-07!6;CL:0000114!8.74e-07!6 | |ontology_enrichment_celltype=CL:0000362!5.38e-13!8;CL:0002159!5.23e-11!13;CL:0000317!1.54e-09!2;CL:1000448!1.54e-09!2;CL:0002308!1.54e-09!2;CL:0002140!1.54e-09!2;CL:0000622!2.25e-08!5;CL:0000312!4.56e-08!5;CL:0000154!4.88e-07!6;CL:0000240!8.74e-07!6;CL:0000311!8.74e-07!6;CL:0000079!8.74e-07!6;CL:0000237!8.74e-07!6;CL:0000036!8.74e-07!6;CL:0000357!8.74e-07!6;CL:0000114!8.74e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002601;2.82e-21;1!CL:0000622;8.47e-17;5!CL:0000154;3.59e-14;6!CL:0000317;4.30e-11;2!CL:1000448;4.30e-11;2!CL:0002308;4.30e-11;2!CL:0002140;4.30e-11;2!CL:0000150;9.04e-10;9!CL:0000362;1.08e-09;9!CL:0002623;5.18e-08;3 | |ontology_enrichment_celltype_v019=CL:0002601;2.82e-21;1!CL:0000622;8.47e-17;5!CL:0000154;3.59e-14;6!CL:0000317;4.30e-11;2!CL:1000448;4.30e-11;2!CL:0002308;4.30e-11;2!CL:0002140;4.30e-11;2!CL:0000150;9.04e-10;9!CL:0000362;1.08e-09;9!CL:0002623;5.18e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002601,2.82e-21,1;CL:0000622,8.82e-17,5;CL:0000154,3.71e-14,6;CL:0000317,4.52e-11,2;CL:1000448,4.52e-11,2;CL:0002308,4.52e-11,2;CL:0002140,4.52e-11,2;CL:0000150,9.24e-10,9;CL:0000362,1.15e-09,9;CL:0002623,5.18e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;5.16e-21;1 | |ontology_enrichment_development_v019=UBERON:0000358;5.16e-21;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;3.45e-21;1!DOID:3149;3.45e-21;1!DOID:3347;8.53e-21;1!DOID:3451;2.73e-11;2!DOID:4159;2.73e-11;2!DOID:0060122;2.73e-11;2!DOID:0060084;6.78e-08;3!DOID:127;6.78e-08;3 | |ontology_enrichment_disease_v019=DOID:3151;3.45e-21;1!DOID:3149;3.45e-21;1!DOID:3347;8.53e-21;1!DOID:3451;2.73e-11;2!DOID:4159;2.73e-11;2!DOID:0060122;2.73e-11;2!DOID:0060084;6.78e-08;3!DOID:127;6.78e-08;3 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,3.45e-21,1;DOID:3149,3.45e-21,1;DOID:3347,7.72e-21,1;DOID:3451,2.73e-11,2;DOID:4159,2.73e-11,2;DOID:0060122,2.73e-11,2;DOID:0060084,6.34e-08,3;DOID:127,6.34e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0003102!4.92e-11!95;UBERON:0001003!2.20e-10!14;UBERON:0007376!2.20e-10!14;UBERON:0007383!2.20e-10!14;UBERON:0002097!3.06e-10!40;UBERON:0000014!3.29e-10!4;UBERON:0002419!1.54e-09!2;UBERON:0007771!1.54e-09!2;UBERON:0003297!1.54e-09!2;UBERON:0001821!1.54e-09!2;UBERON:0003487!1.54e-09!2;UBERON:0001820!1.54e-09!2;UBERON:0005089!1.54e-09!2;UBERON:0005088!1.54e-09!2;UBERON:0002199!7.40e-09!45;UBERON:0002416!7.40e-09!45;UBERON:0002046!5.80e-08!5;UBERON:0004117!5.80e-08!5;UBERON:0007689!5.80e-08!5;UBERON:0007123!5.80e-08!5;UBERON:0003091!5.80e-08!5 | |ontology_enrichment_uberon=UBERON:0003102!4.92e-11!95;UBERON:0001003!2.20e-10!14;UBERON:0007376!2.20e-10!14;UBERON:0007383!2.20e-10!14;UBERON:0002097!3.06e-10!40;UBERON:0000014!3.29e-10!4;UBERON:0002419!1.54e-09!2;UBERON:0007771!1.54e-09!2;UBERON:0003297!1.54e-09!2;UBERON:0001821!1.54e-09!2;UBERON:0003487!1.54e-09!2;UBERON:0001820!1.54e-09!2;UBERON:0005089!1.54e-09!2;UBERON:0005088!1.54e-09!2;UBERON:0002199!7.40e-09!45;UBERON:0002416!7.40e-09!45;UBERON:0002046!5.80e-08!5;UBERON:0004117!5.80e-08!5;UBERON:0007689!5.80e-08!5;UBERON:0007123!5.80e-08!5;UBERON:0003091!5.80e-08!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0007029;1.53e-21;1!UBERON:0000014;5.17e-21;4!UBERON:0001003;1.49e-12;15!UBERON:0007376;1.49e-12;15!UBERON:0000995;3.20e-11;17!UBERON:0002419;4.30e-11;2!UBERON:0007771;4.30e-11;2!UBERON:0003297;4.30e-11;2!UBERON:0001821;4.30e-11;2!UBERON:0003487;4.30e-11;2!UBERON:0001820;4.30e-11;2!UBERON:0003975;1.24e-10;18!UBERON:0004175;3.35e-09;21!UBERON:0002199;4.98e-08;46!UBERON:0002416;4.98e-08;46 | |ontology_enrichment_uberon_v019=UBERON:0007029;1.53e-21;1!UBERON:0000014;5.17e-21;4!UBERON:0001003;1.49e-12;15!UBERON:0007376;1.49e-12;15!UBERON:0000995;3.20e-11;17!UBERON:0002419;4.30e-11;2!UBERON:0007771;4.30e-11;2!UBERON:0003297;4.30e-11;2!UBERON:0001821;4.30e-11;2!UBERON:0003487;4.30e-11;2!UBERON:0001820;4.30e-11;2!UBERON:0003975;1.24e-10;18!UBERON:0004175;3.35e-09;21!UBERON:0002199;4.98e-08;46!UBERON:0002416;4.98e-08;46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,1.53e-21,1;UBERON:0000014,5.17e-21,4;UBERON:0001003,1.58e-12,15;UBERON:0007376,1.58e-12,15;UBERON:0007383,1.58e-12,15;UBERON:0002419,4.52e-11,2;UBERON:0007771,4.52e-11,2;UBERON:0003297,4.52e-11,2;UBERON:0001821,4.52e-11,2;UBERON:0003487,4.52e-11,2;UBERON:0001820,4.52e-11,2;UBERON:0005089,4.52e-11,2;UBERON:0005088,4.52e-11,2;UBERON:0000995,3.26e-09,21;UBERON:0005795,8.03e-09,22;UBERON:0003975,8.03e-09,22;UBERON:0002097,4.30e-08,41;UBERON:0004175,7.84e-08,25;UBERON:0002199,3.04e-07,46;UBERON:0002416,3.04e-07,46 | |||
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| ||
|short_description=p1@LINC00302 | |short_description=p1@LINC00302 | ||
}} | }} |
Latest revision as of 03:38, 17 September 2015
Short description: | p1@LINC00302 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LINC00302_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | -21bp_to_ENST00000444515, ENST00000536536_5end |
EntrezGene: | NA |
HGNC: | 31825 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterine smooth muscle cell | 2.82e-21 | 1 |
acinar cell | 8.82e-17 | 5 |
protein secreting cell | 3.71e-14 | 6 |
sebum secreting cell | 4.52e-11 | 2 |
epithelial cell of sweat gland | 4.52e-11 | 2 |
epithelial cell of skin gland | 4.52e-11 | 2 |
acinar cell of sebaceous gland | 4.52e-11 | 2 |
glandular epithelial cell | 9.24e-10 | 9 |
epidermal cell | 1.15e-09 | 9 |
acinar cell of salivary gland | 5.18e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
surface | 1.53e-21 | 1 |
zone of skin | 5.17e-21 | 4 |
skin epidermis | 1.58e-12 | 15 |
outer epithelium | 1.58e-12 | 15 |
enveloping layer of ectoderm | 1.58e-12 | 15 |
skin gland | 4.52e-11 | 2 |
epidermis gland | 4.52e-11 | 2 |
gland of integumental system | 4.52e-11 | 2 |
sebaceous gland | 4.52e-11 | 2 |
skin sebaceous gland | 4.52e-11 | 2 |
sweat gland | 4.52e-11 | 2 |
sweat gland placode | 4.52e-11 | 2 |
sebaceous gland placode | 4.52e-11 | 2 |
uterus | 3.26e-09 | 21 |
embryonic uterus | 8.03e-09 | 22 |
internal female genitalia | 8.03e-09 | 22 |
skin of body | 4.30e-08 | 41 |
internal genitalia | 7.84e-08 | 25 |
integument | 3.04e-07 | 46 |
integumental system | 3.04e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.45e-21 | 1 |
keratoacanthoma | 3.45e-21 | 1 |
osteosarcoma | 7.72e-21 | 1 |
skin carcinoma | 2.73e-11 | 2 |
skin cancer | 2.73e-11 | 2 |
integumentary system cancer | 2.73e-11 | 2 |
cell type benign neoplasm | 6.34e-08 | 3 |
leiomyoma | 6.34e-08 | 3 |