FFCP PHASE1:Hg19::chr15:31453344..31453356,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4308 | |EntrezGene=4308 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7146 | |HGNC=7146 | ||
|TSSclassifier=strong | |||
|UniProt=D9IDV3 | |UniProt=D9IDV3 | ||
|association_with_transcript=119bp_to_ENST00000542188,NM_001252020_5end | |association_with_transcript=119bp_to_ENST00000542188,NM_001252020_5end | ||
|cluster_id=chr15:31453344..31453356,- | |||
|coexpression_cluster_id=C41 | |coexpression_cluster_id=C41 | ||
|description=CAGE_peak_3_at_TRPM1_5end | |description=CAGE_peak_3_at_TRPM1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000243!8.55e-09!15;CL:0000125!8.55e-09!15;CL:0000030!8.55e-09!15;CL:0000339!8.55e-09!15;CL:0000095!5.73e-08!17;CL:0000123!5.73e-08!17 | |ontology_enrichment_celltype=CL:0000243!8.55e-09!15;CL:0000125!8.55e-09!15;CL:0000030!8.55e-09!15;CL:0000339!8.55e-09!15;CL:0000095!5.73e-08!17;CL:0000123!5.73e-08!17 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.62e-23;3!UBERON:0006238;2.47e-07;10 | |ontology_enrichment_development_v019=UBERON:0003056;2.62e-23;3!UBERON:0006238;2.47e-07;10 | ||
|ontology_enrichment_disease=DOID:3093!4.80e-12!11;DOID:5409!1.70e-09!4;DOID:4362!7.01e-08!5 | |ontology_enrichment_disease=DOID:3093!4.80e-12!11;DOID:5409!1.70e-09!4;DOID:4362!7.01e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:3093;7.92e-07;11 | |ontology_enrichment_disease_v019=DOID:3093;7.92e-07;11 | ||
|ontology_enrichment_disease_v019_2=DOID:3093,7.92e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0000966!2.08e-27!5;UBERON:0005388!2.08e-27!5;UBERON:0001802!2.08e-27!5;UBERON:0000970!1.17e-15!20;UBERON:0002104!5.94e-15!21;UBERON:0000020!1.01e-13!23;UBERON:0001032!3.48e-13!24;UBERON:0004456!3.48e-13!24;UBERON:0000019!5.54e-08!19;UBERON:0000047!5.54e-08!19;UBERON:0004088!5.54e-08!19;UBERON:0003072!5.54e-08!19;UBERON:0003071!5.54e-08!19;UBERON:0004128!5.54e-08!19;UBERON:0001456!2.60e-07!21;UBERON:0000002!8.97e-07!6;UBERON:0001560!8.97e-07!6 | |ontology_enrichment_uberon=UBERON:0000966!2.08e-27!5;UBERON:0005388!2.08e-27!5;UBERON:0001802!2.08e-27!5;UBERON:0000970!1.17e-15!20;UBERON:0002104!5.94e-15!21;UBERON:0000020!1.01e-13!23;UBERON:0001032!3.48e-13!24;UBERON:0004456!3.48e-13!24;UBERON:0000019!5.54e-08!19;UBERON:0000047!5.54e-08!19;UBERON:0004088!5.54e-08!19;UBERON:0003072!5.54e-08!19;UBERON:0003071!5.54e-08!19;UBERON:0004128!5.54e-08!19;UBERON:0001456!2.60e-07!21;UBERON:0000002!8.97e-07!6;UBERON:0001560!8.97e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.40e-14;5!UBERON:0005388;1.40e-14;5!UBERON:0001802;1.40e-14;5!UBERON:0000970;2.58e-14;20!UBERON:0002104;1.09e-13;21!UBERON:0000020;1.33e-12;23!UBERON:0001032;3.97e-12;24!UBERON:0004456;3.97e-12;24 | |ontology_enrichment_uberon_v019=UBERON:0000966;1.40e-14;5!UBERON:0005388;1.40e-14;5!UBERON:0001802;1.40e-14;5!UBERON:0000970;2.58e-14;20!UBERON:0002104;1.09e-13;21!UBERON:0000020;1.33e-12;23!UBERON:0001032;3.97e-12;24!UBERON:0004456;3.97e-12;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.09e-13,21;UBERON:0002104,1.09e-13,21;UBERON:0000966,2.19e-12,6;UBERON:0005388,2.19e-12,6;UBERON:0001802,2.19e-12,6;UBERON:0000020,3.97e-12,24;UBERON:0001032,3.97e-12,24;UBERON:0004456,3.97e-12,24 | |||
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|short_description=p3@TRPM1 | |short_description=p3@TRPM1 | ||
}} | }} |
Latest revision as of 03:31, 17 September 2015
Short description: | p3@TRPM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRPM1_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 119bp_to_ENST00000542188, NM_001252020_5end |
EntrezGene: | TRPM1 |
HGNC: | 7146 |
UniProt: | D9IDV3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.09e-13 | 21 |
visual system | 1.09e-13 | 21 |
retina | 2.19e-12 | 6 |
photoreceptor array | 2.19e-12 | 6 |
posterior segment of eyeball | 2.19e-12 | 6 |
sense organ | 3.97e-12 | 24 |
sensory system | 3.97e-12 | 24 |
entire sense organ system | 3.97e-12 | 24 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 7.92e-07 | 11 |