FFCP PHASE1:Hg19::chr15:31453318..31453329,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4308 | |EntrezGene=4308 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7146 | |HGNC=7146 | ||
|TSSclassifier=strong | |||
|UniProt=D9IDV3 | |UniProt=D9IDV3 | ||
|association_with_transcript=146bp_to_ENST00000542188,NM_001252020_5end | |association_with_transcript=146bp_to_ENST00000542188,NM_001252020_5end | ||
|cluster_id=chr15:31453318..31453329,- | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_6_at_TRPM1_5end | |description=CAGE_peak_6_at_TRPM1_5end | ||
|id=chr15:31453318..31453329,- | |id=chr15:31453318..31453329,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.93e-23;3!UBERON:0006238;2.40e-07;10 | |||
|ontology_enrichment_disease=DOID:5409!1.29e-13!4;DOID:1325!2.35e-08!7;DOID:3904!2.35e-08!7;DOID:3905!8.85e-07!9 | |ontology_enrichment_disease=DOID:5409!1.29e-13!4;DOID:1325!2.35e-08!7;DOID:3904!2.35e-08!7;DOID:3905!8.85e-07!9 | ||
|ontology_enrichment_disease_v019=DOID:3093;7.70e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,7.92e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0000966!2.66e-11!5;UBERON:0005388!2.66e-11!5;UBERON:0001802!2.66e-11!5;UBERON:0000970!5.42e-11!20;UBERON:0002104!1.61e-10!21;UBERON:0000020!1.07e-09!23;UBERON:0001032!2.45e-09!24;UBERON:0004456!2.45e-09!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.50e-14;5!UBERON:0005388;1.50e-14;5!UBERON:0001802;1.50e-14;5!UBERON:0000970;2.67e-14;20!UBERON:0002104;1.12e-13;21!UBERON:0000020;1.36e-12;23!UBERON:0001032;4.08e-12;24!UBERON:0004456;4.08e-12;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.09e-13,21;UBERON:0002104,1.09e-13,21;UBERON:0000966,2.19e-12,6;UBERON:0005388,2.19e-12,6;UBERON:0001802,2.19e-12,6;UBERON:0000020,3.97e-12,24;UBERON:0001032,3.97e-12,24;UBERON:0004456,3.97e-12,24 | |||
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|short_description=p6@TRPM1 | |short_description=p6@TRPM1 | ||
}} | }} |
Latest revision as of 03:30, 17 September 2015
Short description: | p6@TRPM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TRPM1_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 146bp_to_ENST00000542188, NM_001252020_5end |
EntrezGene: | TRPM1 |
HGNC: | 7146 |
UniProt: | D9IDV3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.09e-13 | 21 |
visual system | 1.09e-13 | 21 |
retina | 2.19e-12 | 6 |
photoreceptor array | 2.19e-12 | 6 |
posterior segment of eyeball | 2.19e-12 | 6 |
sense organ | 3.97e-12 | 24 |
sensory system | 3.97e-12 | 24 |
entire sense organ system | 3.97e-12 | 24 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 7.92e-07 | 11 |