FFCP PHASE1:Hg19::chr17:70117153..70117174,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6662 | |EntrezGene=6662 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11204 | |HGNC=11204 | ||
|TSSclassifier=strong | |||
|UniProt=P48436,E7EPD5 | |UniProt=P48436,E7EPD5 | ||
|association_with_transcript=0bp_to_ENST00000245479,ENST00000455872,NM_000346,uc002jiw.2_5end | |association_with_transcript=0bp_to_ENST00000245479,ENST00000455872,NM_000346,uc002jiw.2_5end | ||
|cluster_id=chr17:70117153..70117174,+ | |||
|coexpression_cluster_id=C3671 | |coexpression_cluster_id=C3671 | ||
|description=CAGE_peak_1_at_SOX9_5end | |description=CAGE_peak_1_at_SOX9_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000223!3.93e-07!59 | |ontology_enrichment_celltype=CL:0000223!3.93e-07!59 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.40e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.42e-09;82 | |ontology_enrichment_development_v019=UBERON:0006601;2.42e-09;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;5.34e-17;34!UBERON:0003528;8.32e-17;34!UBERON:0002020;8.32e-17;34!UBERON:0001869;9.50e-17;32!UBERON:0002791;9.53e-17;32!UBERON:0000073;2.67e-15;53!UBERON:0002616;2.67e-15;53!UBERON:0002780;3.84e-15;41!UBERON:0001890;3.84e-15;41!UBERON:0000956;2.03e-14;25!UBERON:0000203;2.03e-14;25!UBERON:0002619;7.41e-13;22!UBERON:0000955;7.60e-12;68!UBERON:0001017;7.89e-12;75!UBERON:0001950;1.27e-11;20!UBERON:0001016;3.58e-10;83!UBERON:0004733;4.85e-07;12!UBERON:0002028;4.85e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0001893;5.34e-17;34!UBERON:0003528;8.32e-17;34!UBERON:0002020;8.32e-17;34!UBERON:0001869;9.50e-17;32!UBERON:0002791;9.53e-17;32!UBERON:0000073;2.67e-15;53!UBERON:0002616;2.67e-15;53!UBERON:0002780;3.84e-15;41!UBERON:0001890;3.84e-15;41!UBERON:0000956;2.03e-14;25!UBERON:0000203;2.03e-14;25!UBERON:0002619;7.41e-13;22!UBERON:0000955;7.60e-12;68!UBERON:0001017;7.89e-12;75!UBERON:0001950;1.27e-11;20!UBERON:0001016;3.58e-10;83!UBERON:0004733;4.85e-07;12!UBERON:0002028;4.85e-07;12 | ||
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| ||
|short_description=p1@SOX9 | |short_description=p1@SOX9 | ||
}} | }} |
Latest revision as of 03:24, 17 September 2015
Short description: | p1@SOX9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SOX9_5end |
Coexpression cluster: | C3671_Neural_Chondrocyte_hepatocellular_caudate_signet_hippocampus_papillotubular |
Association with transcript: | 0bp_to_ENST00000245479, ENST00000455872, NM_000346, uc002jiw.2_5end |
EntrezGene: | SOX9 |
HGNC: | 11204 |
UniProt: | P48436E7EPD5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.40e-07 | 58 |