FFCP PHASE1:Hg19::chr17:70117153..70117174,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6662 | |EntrezGene=6662 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11204 | |HGNC=11204 | ||
|TSSclassifier=strong | |||
|UniProt=P48436,E7EPD5 | |UniProt=P48436,E7EPD5 | ||
|association_with_transcript=0bp_to_ENST00000245479,ENST00000455872,NM_000346,uc002jiw.2_5end | |association_with_transcript=0bp_to_ENST00000245479,ENST00000455872,NM_000346,uc002jiw.2_5end | ||
|cluster_id=chr17:70117153..70117174,+ | |||
|coexpression_cluster_id=C3671 | |||
|description=CAGE_peak_1_at_SOX9_5end | |description=CAGE_peak_1_at_SOX9_5end | ||
|id=chr17:70117153..70117174,+ | |id=chr17:70117153..70117174,+ | ||
|ontology_enrichment_celltype=CL:0000223!3.93e-07!59 | |ontology_enrichment_celltype=CL:0000223!3.93e-07!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.40e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.42e-09;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.58e-36!365;UBERON:0004121!3.38e-34!169;UBERON:0000924!2.47e-33!173;UBERON:0006601!2.47e-33!173;UBERON:0000033!4.50e-33!123;UBERON:0000481!7.43e-33!347;UBERON:0000153!6.04e-31!129;UBERON:0007811!6.04e-31!129;UBERON:0005743!3.44e-30!86;UBERON:0003075!2.02e-29!86;UBERON:0007284!2.02e-29!86;UBERON:0001017!8.29e-29!82;UBERON:0000073!2.09e-28!94;UBERON:0001016!2.09e-28!94;UBERON:0002346!5.63e-28!90;UBERON:0001049!5.96e-28!57;UBERON:0005068!5.96e-28!57;UBERON:0006241!5.96e-28!57;UBERON:0007135!5.96e-28!57;UBERON:0000955!8.31e-26!69;UBERON:0006238!8.31e-26!69;UBERON:0002616!4.30e-24!59;UBERON:0000119!8.79e-23!312;UBERON:0003056!1.86e-22!61;UBERON:0000483!2.45e-22!309;UBERON:0003080!1.27e-20!42;UBERON:0002780!1.80e-20!41;UBERON:0001890!1.80e-20!41;UBERON:0006240!1.80e-20!41;UBERON:0000062!2.03e-20!511;UBERON:0004111!5.38e-20!241;UBERON:0000468!1.52e-19!659;UBERON:0001893!3.10e-19!34;UBERON:0002020!3.86e-19!34;UBERON:0003528!3.86e-19!34;UBERON:0000922!4.94e-19!612;UBERON:0002791!9.16e-19!33;UBERON:0000477!2.40e-18!286;UBERON:0001869!3.57e-18!32;UBERON:0002050!4.56e-18!605;UBERON:0005423!4.56e-18!605;UBERON:0007023!4.71e-18!115;UBERON:0000923!6.08e-18!604;UBERON:0005291!6.08e-18!604;UBERON:0006598!6.08e-18!604;UBERON:0002532!6.08e-18!604;UBERON:0000064!8.53e-18!219;UBERON:0000025!1.14e-17!194;UBERON:0000467!3.20e-17!625;UBERON:0000480!6.72e-17!626;UBERON:0000956!2.78e-14!25;UBERON:0000203!2.78e-14!25;UBERON:0002619!9.70e-13!22;UBERON:0001950!1.60e-11!20;UBERON:0001048!2.15e-10!168;UBERON:0004119!3.29e-10!169;UBERON:0000925!3.29e-10!169;UBERON:0006595!3.29e-10!169;UBERON:0001007!3.50e-09!155;UBERON:0001555!3.50e-09!155;UBERON:0007026!3.50e-09!155;UBERON:0003103!8.91e-09!69;UBERON:0003076!1.83e-08!15;UBERON:0003057!1.83e-08!15;UBERON:0005177!3.56e-08!107;UBERON:0000466!6.27e-08!126;UBERON:0003104!2.23e-07!238;UBERON:0009142!2.23e-07!238;UBERON:0004733!5.58e-07!12;UBERON:0002028!5.58e-07!12;UBERON:0007277!5.58e-07!12;UBERON:0001444!7.80e-07!48;UBERON:0000464!8.16e-07!104;UBERON:0005911!8.87e-07!82;UBERON:0004921!9.25e-07!129;UBERON:0004185!9.25e-07!129 | |ontology_enrichment_uberon=UBERON:0000475!3.58e-36!365;UBERON:0004121!3.38e-34!169;UBERON:0000924!2.47e-33!173;UBERON:0006601!2.47e-33!173;UBERON:0000033!4.50e-33!123;UBERON:0000481!7.43e-33!347;UBERON:0000153!6.04e-31!129;UBERON:0007811!6.04e-31!129;UBERON:0005743!3.44e-30!86;UBERON:0003075!2.02e-29!86;UBERON:0007284!2.02e-29!86;UBERON:0001017!8.29e-29!82;UBERON:0000073!2.09e-28!94;UBERON:0001016!2.09e-28!94;UBERON:0002346!5.63e-28!90;UBERON:0001049!5.96e-28!57;UBERON:0005068!5.96e-28!57;UBERON:0006241!5.96e-28!57;UBERON:0007135!5.96e-28!57;UBERON:0000955!8.31e-26!69;UBERON:0006238!8.31e-26!69;UBERON:0002616!4.30e-24!59;UBERON:0000119!8.79e-23!312;UBERON:0003056!1.86e-22!61;UBERON:0000483!2.45e-22!309;UBERON:0003080!1.27e-20!42;UBERON:0002780!1.80e-20!41;UBERON:0001890!1.80e-20!41;UBERON:0006240!1.80e-20!41;UBERON:0000062!2.03e-20!511;UBERON:0004111!5.38e-20!241;UBERON:0000468!1.52e-19!659;UBERON:0001893!3.10e-19!34;UBERON:0002020!3.86e-19!34;UBERON:0003528!3.86e-19!34;UBERON:0000922!4.94e-19!612;UBERON:0002791!9.16e-19!33;UBERON:0000477!2.40e-18!286;UBERON:0001869!3.57e-18!32;UBERON:0002050!4.56e-18!605;UBERON:0005423!4.56e-18!605;UBERON:0007023!4.71e-18!115;UBERON:0000923!6.08e-18!604;UBERON:0005291!6.08e-18!604;UBERON:0006598!6.08e-18!604;UBERON:0002532!6.08e-18!604;UBERON:0000064!8.53e-18!219;UBERON:0000025!1.14e-17!194;UBERON:0000467!3.20e-17!625;UBERON:0000480!6.72e-17!626;UBERON:0000956!2.78e-14!25;UBERON:0000203!2.78e-14!25;UBERON:0002619!9.70e-13!22;UBERON:0001950!1.60e-11!20;UBERON:0001048!2.15e-10!168;UBERON:0004119!3.29e-10!169;UBERON:0000925!3.29e-10!169;UBERON:0006595!3.29e-10!169;UBERON:0001007!3.50e-09!155;UBERON:0001555!3.50e-09!155;UBERON:0007026!3.50e-09!155;UBERON:0003103!8.91e-09!69;UBERON:0003076!1.83e-08!15;UBERON:0003057!1.83e-08!15;UBERON:0005177!3.56e-08!107;UBERON:0000466!6.27e-08!126;UBERON:0003104!2.23e-07!238;UBERON:0009142!2.23e-07!238;UBERON:0004733!5.58e-07!12;UBERON:0002028!5.58e-07!12;UBERON:0007277!5.58e-07!12;UBERON:0001444!7.80e-07!48;UBERON:0000464!8.16e-07!104;UBERON:0005911!8.87e-07!82;UBERON:0004921!9.25e-07!129;UBERON:0004185!9.25e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.34e-17;34!UBERON:0003528;8.32e-17;34!UBERON:0002020;8.32e-17;34!UBERON:0001869;9.50e-17;32!UBERON:0002791;9.53e-17;32!UBERON:0000073;2.67e-15;53!UBERON:0002616;2.67e-15;53!UBERON:0002780;3.84e-15;41!UBERON:0001890;3.84e-15;41!UBERON:0000956;2.03e-14;25!UBERON:0000203;2.03e-14;25!UBERON:0002619;7.41e-13;22!UBERON:0000955;7.60e-12;68!UBERON:0001017;7.89e-12;75!UBERON:0001950;1.27e-11;20!UBERON:0001016;3.58e-10;83!UBERON:0004733;4.85e-07;12!UBERON:0002028;4.85e-07;12 | |||
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| ||
|short_description=p1@SOX9 | |short_description=p1@SOX9 | ||
}} | }} |
Latest revision as of 03:24, 17 September 2015
Short description: | p1@SOX9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SOX9_5end |
Coexpression cluster: | C3671_Neural_Chondrocyte_hepatocellular_caudate_signet_hippocampus_papillotubular |
Association with transcript: | 0bp_to_ENST00000245479, ENST00000455872, NM_000346, uc002jiw.2_5end |
EntrezGene: | SOX9 |
HGNC: | 11204 |
UniProt: | P48436E7EPD5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.40e-07 | 58 |