FFCP PHASE1:Hg19::chr17:6983550..6983578,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:6983550..6983578,- to FFCP PHASE1:Hg19::chr17:6983550..6983578,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10462 | |EntrezGene=10462 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16916 | |HGNC=16916 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IUN9 | |UniProt=Q8IUN9 | ||
|association_with_transcript=21bp_to_ENST00000254868,ENST00000416562,NM_006344,NM_182906,uc002gej.2,uc002gek.2,uc002gel.2,uc010clv.1_5end | |||
|cluster_id=chr17:6983550..6983578,- | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_1_at_CLEC10A_5end | |||
|id=chr17:6983550..6983578,- | |||
|ontology_enrichment_celltype=CL:0002009!1.66e-44!65;CL:0000557!1.95e-44!71;CL:0002194!2.25e-42!63;CL:0000576!2.25e-42!63;CL:0000040!2.25e-42!63;CL:0000559!2.25e-42!63;CL:0002057!9.89e-41!42;CL:0000766!4.96e-40!76;CL:0000839!6.12e-40!70;CL:0000860!7.82e-37!45;CL:0000738!2.14e-30!140;CL:0000763!7.84e-30!112;CL:0000049!7.84e-30!112;CL:0002087!9.64e-29!119;CL:0002031!6.27e-28!124;CL:0000037!3.15e-26!172;CL:0000566!3.15e-26!172;CL:0000988!3.75e-23!182;CL:0002032!6.80e-23!165;CL:0000837!6.80e-23!165;CL:0002393!1.05e-08!9;CL:0002397!1.05e-08!9;CL:0000840!4.55e-08!5;CL:0001029!4.55e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.49e-37;33!CL:0002057;1.49e-37;33!CL:0000473;1.37e-35;39!CL:0000234;1.37e-35;39!CL:0000576;6.71e-31;48!CL:0000766;5.30e-20;69!CL:0000763;6.55e-10;100!CL:0002087;8.98e-10;104!CL:0000840;1.05e-09;5!CL:0002393;3.88e-09;6!CL:0002397;3.88e-09;6!CL:0000738;3.21e-08;136!CL:0000451;9.50e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,6.11e-58,61;CL:0002194,3.17e-55,59;CL:0000576,3.17e-55,59;CL:0000040,3.17e-55,59;CL:0000559,3.17e-55,59;CL:0000557,8.83e-53,67;CL:0000473,8.32e-52,48;CL:0000234,8.32e-52,48;CL:0000766,7.64e-48,72;CL:0000839,2.11e-47,66;CL:0000860,1.21e-46,42;CL:0002057,1.21e-46,42;CL:0000738,3.93e-32,136;CL:0000763,4.32e-32,108;CL:0000049,4.32e-32,108;CL:0002087,5.07e-32,115;CL:0002031,1.84e-28,120;CL:0000037,1.68e-24,168;CL:0000988,4.18e-22,177;CL:0002032,2.05e-21,161;CL:0000837,2.05e-21,161;CL:0000840,1.09e-09,5;CL:0001029,1.09e-09,5;CL:0000451,9.21e-08,10;CL:0002393,3.26e-07,9;CL:0002397,3.26e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.97e-33;42!CL:0000049;1.97e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.53e-47!102;UBERON:0003061!1.53e-47!102;UBERON:0002193!4.74e-46!112;UBERON:0002371!5.50e-38!80;UBERON:0001474!1.04e-33!86;UBERON:0002405!7.18e-32!115;UBERON:0007023!1.21e-26!115;UBERON:0004765!3.05e-26!101;UBERON:0001434!3.05e-26!101;UBERON:0003081!4.98e-21!216;UBERON:0002204!1.74e-12!167;UBERON:0000178!3.08e-09!15;UBERON:0000179!3.08e-09!15;UBERON:0000463!3.08e-09!15;UBERON:0000926!5.04e-09!448;UBERON:0004120!5.04e-09!448;UBERON:0006603!5.04e-09!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.43e-11;15!UBERON:0000179;1.43e-11;15!UBERON:0000463;1.43e-11;15!UBERON:0002390;2.11e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.06e-57,98;UBERON:0003061,9.06e-57,98;UBERON:0002193,5.17e-53,108;UBERON:0002371,3.20e-44,76;UBERON:0002405,6.02e-42,93;UBERON:0001474,1.43e-39,82;UBERON:0004765,2.36e-34,90;UBERON:0001434,4.90e-29,100;UBERON:0003081,5.70e-27,203;UBERON:0007023,3.46e-22,114;UBERON:0000926,3.43e-17,315;UBERON:0004120,3.43e-17,315;UBERON:0006603,3.43e-17,315;UBERON:0002204,8.30e-16,167;UBERON:0000178,1.63e-11,15;UBERON:0000179,1.63e-11,15;UBERON:0000463,1.63e-11,15;UBERON:0002050,1.03e-07,564;UBERON:0000923,1.22e-07,560;UBERON:0010316,1.22e-07,560;UBERON:0005291,1.22e-07,560;UBERON:0006598,1.22e-07,560;UBERON:0010317,1.22e-07,560;UBERON:0002532,1.22e-07,560;UBERON:0000479,6.13e-07,773;UBERON:0005423,6.18e-07,581 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.4407426443737,2.68680578668049,13.3141866051825,0,0,0,0,0,0.293600439334847,6.09394949385065,11.4310335057981,7.81239134577067,33.3634056617487,21.3769819572526,34.7727016306152,13.37663796772,7.935394817465,18.1938045890862,9.99444858694444,8.22335776043652,12.3882548358041,13.5215424391411,12.0395532068677,17.2632027818667,11.3766074643084,3.87290810150296,10.8341189275473,12.2357520702693,6.5497476013883,13.9328560355952,11.9372718024652,7.06043859567406,18.5407766481722,13.8537546078421,11.5688921420546,22.1636870277001,8.70627715885752,5.6738522469114,9.34233373493363,10.5524439407832,5.21482918420201,14.7688414399479,9.6863920421339,4.78760926783834,17.4054313092486,19.0129757680748,18.7091783969238,22.852792360413,8.98629049171961,9.01061357049038,4.66104201421532,0.570025487482497,1.79025009479181,0.365328307529268,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0,0,2.24203425192614,2.63384084775077,0,0.786021525498329,1.02800749499755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95569624297229,0.651083453856419,0.950452044448374,4.06552821509986,3.58362511232371,4.99722906209383,2.8413270245282,1.64225599384209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351339142772504,2.88153966094968,0,0,201.219384065904,207.736776598026,296.629209917588,7.3932093534656,2.85997455390064,6.3147775226026,0,0,0,0,0,0,0,0,0,0,0,0,1.46437234528902,0,0,0.17859945656816,0.673588117878509,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,5.31710916013264,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,2.21595305478658,2.34004265139238,1.33768046059855,0,0,0,0,0,0,0,0,0.621984346622316,0.576479813667846,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9461402577071,1.00451418286425,6.32501818449095,0,0,0,0,0,0,0,6.89607660706745,0.862510299438069,1.79680250791648,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.30456117552993,13.3742804507542,21.6656942340992,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95777922130672,0,0,0,0,0,0,0,0,0,0,0,1.36362603865761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.196469961995,0,0,0,0,0,0.422215270595328,0,0,0,0,0.670302275535787,0,4.23647103495506,0,0,0,0,2.02979043692868,4.58782324285425,9.1143549947866,16.1997607311297,17.2772154696202,3.8908398671563,5.40031437238115,12.6900028207083,0,0,0,0,0,0,0,0,2.68107518185313,0.635020748171649,0,0,0,0,0,0.846458889008016,0,0.605399121573143,0,0,0,0,0,0,0,0,0,0,0,0,2.93016358543788,0,0,0,0,0,0,0,0,0,0,0,5.18044769452781,9.39365312805902,0,0,0,0,0,0,40.4142172479229,3.84709281984041,16.7638164642858,0,0,0.185536196323703,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0.658156191461918,0,0,2.77020930613669,0,0,0,0,0,0,1.06606955203727,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,8.95735737970654,5.48436899920703,6.72133159426988,0,0,0,0.202203398942031,6.42062117839031,0,0,0,0,1.57833761139756,8.46935012340647,0,9.03568088687378,0,0,0,0,0,0,0,0,0,0,0,23.7628268809161,0,0,0,0,4.46149475846729,0,1.80784592624426,0,0,0,0,0,10.4591967422283,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,3.0721064139948,2.97908551215189,2.87149209830726,2.39614800598789,2.14613024068285,2.4548860318606,1.00775208730089,0,0,0,0,0,0,0,0,0,0,0,0,29.0216320101436,9.2856234546954,0.0607495566580247,0,2.12775409707835,0.786818822024972,0,0,0,14.2939065274673,7.94510364438518,0,0,0,0,0,0.082092520749339,0,0,2.19828350517124,3.97520666736664,0,0,0,0,4.59185874041087,2.67247318669432,24.0258652101373,31.2584593741529,0,0,0,0,0,2.14441903734423,0.983617892129413,0,0,0,0.1251909307065,1.72022758707021,0.443716206147409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65462722368366,0,2.34454203369928,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,1.64477330057155,6.94695649745012,0,0,0,0,0,0.682986574053893,0.354809480650555,0,0,0.135939465953663,0,0,0,4.78807866388135,0,0,3.65263488203798,0,0,2.14429632529969,0,0,0,0,0,0,0,0.860454717640555,0,0,4.23387050190929,0,0,0,0,0,0,1.29485767437579,3.38787262625615,2.3196288626764,4.37139893753226,0,0,0,0,0,0,9.95546639592486,6.99390593612663,0,4.4126697915703,0,0.392616934229891,0,0,0,4.88716373495239,5.47892047775406,0,0,0,0,6.57302749421866,4.12856355064087,0.143339583151451,0,0.0679914901909147,0,8.46442944824641,0,0,0,0,0,0,0,0,0,0,3.41004141982077,1.33982065078089,0,0,5.33084954752452,0.952257725854961,3.03567876229229,2.54506328613017,0,2.10035622317944,2.42540626749863,8.05551967218757,4.79126621519393,7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| 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| ||
|short_description=p1@CLEC10A | |||
}} | }} |
Latest revision as of 03:19, 17 September 2015
Short description: | p1@CLEC10A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLEC10A_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 21bp_to_ENST00000254868, ENST00000416562, NM_006344, NM_182906, uc002gej.2, uc002gek.2, uc002gel.2, uc010clv.1_5end |
EntrezGene: | CLEC10A |
HGNC: | 16916 |
UniProt: | Q8IUN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 6.11e-58 | 61 |
monopoietic cell | 3.17e-55 | 59 |
monocyte | 3.17e-55 | 59 |
monoblast | 3.17e-55 | 59 |
promonocyte | 3.17e-55 | 59 |
granulocyte monocyte progenitor cell | 8.83e-53 | 67 |
defensive cell | 8.32e-52 | 48 |
phagocyte | 8.32e-52 | 48 |
myeloid leukocyte | 7.64e-48 | 72 |
myeloid lineage restricted progenitor cell | 2.11e-47 | 66 |
classical monocyte | 1.21e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.21e-46 | 42 |
leukocyte | 3.93e-32 | 136 |
myeloid cell | 4.32e-32 | 108 |
common myeloid progenitor | 4.32e-32 | 108 |
nongranular leukocyte | 5.07e-32 | 115 |
hematopoietic lineage restricted progenitor cell | 1.84e-28 | 120 |
hematopoietic stem cell | 1.68e-24 | 168 |
hematopoietic cell | 4.18e-22 | 177 |
hematopoietic oligopotent progenitor cell | 2.05e-21 | 161 |
hematopoietic multipotent progenitor cell | 2.05e-21 | 161 |
immature conventional dendritic cell | 1.09e-09 | 5 |
common dendritic progenitor | 1.09e-09 | 5 |
dendritic cell | 9.21e-08 | 10 |
intermediate monocyte | 3.26e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.26e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.06e-57 | 98 |
blood island | 9.06e-57 | 98 |
hemolymphoid system | 5.17e-53 | 108 |
bone marrow | 3.20e-44 | 76 |
immune system | 6.02e-42 | 93 |
bone element | 1.43e-39 | 82 |
skeletal element | 2.36e-34 | 90 |
skeletal system | 4.90e-29 | 100 |
lateral plate mesoderm | 5.70e-27 | 203 |
adult organism | 3.46e-22 | 114 |
mesoderm | 3.43e-17 | 315 |
mesoderm-derived structure | 3.43e-17 | 315 |
presumptive mesoderm | 3.43e-17 | 315 |
musculoskeletal system | 8.30e-16 | 167 |
blood | 1.63e-11 | 15 |
haemolymphatic fluid | 1.63e-11 | 15 |
organism substance | 1.63e-11 | 15 |
embryonic structure | 1.03e-07 | 564 |
germ layer | 1.22e-07 | 560 |
germ layer / neural crest | 1.22e-07 | 560 |
embryonic tissue | 1.22e-07 | 560 |
presumptive structure | 1.22e-07 | 560 |
germ layer / neural crest derived structure | 1.22e-07 | 560 |
epiblast (generic) | 1.22e-07 | 560 |
tissue | 6.13e-07 | 773 |
developing anatomical structure | 6.18e-07 | 581 |