FFCP PHASE1:Hg19::chr3:18486324..18486338,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9779 | |EntrezGene=9779 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19166 | |HGNC=19166 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_ENST00000414318_5end | |association_with_transcript=-15bp_to_ENST00000414318_5end | ||
|cluster_id=chr3:18486324..18486338,- | |||
|coexpression_cluster_id=C712 | |||
|description=CAGE_peak_4_at_TBC1D5_5end | |description=CAGE_peak_4_at_TBC1D5_5end | ||
|id=chr3:18486324..18486338,- | |id=chr3:18486324..18486338,- | ||
|ontology_enrichment_celltype=CL:0000037!3.86e-32!172;CL:0000566!3.86e-32!172;CL:0000988!2.57e-30!182;CL:0002032!2.13e-28!165;CL:0000837!2.13e-28!165;CL:0000738!7.52e-23!140;CL:0002087!2.86e-20!119;CL:0002031!4.91e-19!124;CL:0000084!2.01e-17!25;CL:0000827!2.01e-17!25;CL:0000838!3.50e-17!52;CL:0000542!1.55e-16!53;CL:0000051!1.55e-16!53;CL:0000791!3.96e-14!18;CL:0000789!3.96e-14!18;CL:0002420!3.96e-14!18;CL:0002419!3.96e-14!18;CL:0000790!3.96e-14!18;CL:0000763!8.93e-13!112;CL:0000049!8.93e-13!112;CL:0000625!2.25e-09!11;CL:0000766!4.66e-07!76 | |ontology_enrichment_celltype=CL:0000037!3.86e-32!172;CL:0000566!3.86e-32!172;CL:0000988!2.57e-30!182;CL:0002032!2.13e-28!165;CL:0000837!2.13e-28!165;CL:0000738!7.52e-23!140;CL:0002087!2.86e-20!119;CL:0002031!4.91e-19!124;CL:0000084!2.01e-17!25;CL:0000827!2.01e-17!25;CL:0000838!3.50e-17!52;CL:0000542!1.55e-16!53;CL:0000051!1.55e-16!53;CL:0000791!3.96e-14!18;CL:0000789!3.96e-14!18;CL:0002420!3.96e-14!18;CL:0002419!3.96e-14!18;CL:0000790!3.96e-14!18;CL:0000763!8.93e-13!112;CL:0000049!8.93e-13!112;CL:0000625!2.25e-09!11;CL:0000766!4.66e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000084;8.49e-30;25!CL:0000791;1.68e-23;18!CL:0000789;1.68e-23;18!CL:0002419;1.68e-23;18!CL:0000542;6.37e-16;53!CL:0000625;4.00e-15;11!CL:0000624;3.40e-09;6!CL:0002087;4.67e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,6.85e-30,25;CL:0000827,6.85e-30,25;CL:0000037,9.02e-29,168;CL:0000838,1.13e-26,52;CL:0000988,3.56e-26,177;CL:0000542,6.00e-26,53;CL:0000051,6.00e-26,53;CL:0002032,1.90e-25,161;CL:0000837,1.90e-25,161;CL:0000791,1.41e-23,18;CL:0000789,1.41e-23,18;CL:0002420,1.41e-23,18;CL:0002419,1.41e-23,18;CL:0000790,1.41e-23,18;CL:0002087,1.14e-18,115;CL:0000738,1.66e-17,136;CL:0000625,3.07e-15,11;CL:0002031,2.11e-14,120;CL:0000624,3.06e-09,6 | |||
|ontology_enrichment_development_v019=CL:0000790;1.68e-23;18!CL:0000051;6.37e-16;53 | |||
|ontology_enrichment_disease=DOID:1240!1.74e-12!39;DOID:2531!2.89e-12!51;DOID:0060083!2.89e-12!51;DOID:8692!2.47e-11!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.18e-15;31!DOID:1240;1.50e-14;39!DOID:2531;3.12e-10;51!DOID:0060083;3.12e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.29e-18,39;DOID:8692,3.22e-15,31;DOID:2531,9.39e-15,51;DOID:0060083,9.39e-15,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.91e-12!115;UBERON:0002390!1.46e-11!102;UBERON:0003061!1.46e-11!102;UBERON:0002193!4.50e-10!112;UBERON:0000178!5.01e-09!15;UBERON:0000179!5.01e-09!15;UBERON:0000463!5.01e-09!15;UBERON:0001950!6.02e-09!20;UBERON:0002619!2.74e-08!22 | |ontology_enrichment_uberon=UBERON:0007023!1.91e-12!115;UBERON:0002390!1.46e-11!102;UBERON:0003061!1.46e-11!102;UBERON:0002193!4.50e-10!112;UBERON:0000178!5.01e-09!15;UBERON:0000179!5.01e-09!15;UBERON:0000463!5.01e-09!15;UBERON:0001950!6.02e-09!20;UBERON:0002619!2.74e-08!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.34e-11;15!UBERON:0000179;3.34e-11;15!UBERON:0000463;3.34e-11;15!UBERON:0002390;2.49e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.68e-11,15;UBERON:0000179,3.68e-11,15;UBERON:0000463,3.68e-11,15;UBERON:0002370,8.39e-07,4;UBERON:0005058,8.39e-07,4;UBERON:0009113,8.39e-07,4;UBERON:0003295,8.39e-07,4;UBERON:0005562,8.39e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,1.15148819429164,0.464448369948228,0,0,0,0.387336002901508,0,2.34880351467878,1.66198622559563,0.802177789880567,0.651032612147555,0,0.32389366601898,0.515151135268373,0.145398238779565,0.755751887377619,0.242584061187816,0.697287110717054,1.23350366406548,0,0.575384784644301,0.256160706529101,0,2.06847408441971,2.5819387343353,0,2.25890807451126,0.818718450173537,0.898893937780338,1.22433556948361,1.28371610830437,1.27867425159808,0.659702600373432,0.598390972864896,0.852449501065388,0.290209238628584,1.70215567407342,0.622822248995575,0.75374599577023,0,0.434377689410233,0.605399502633369,1.47311054395026,0.632924774881769,0.211255286311942,0,0,0,0,0,0,0,0,0,3.27683166757279,2.66852776159066,0.426730222566507,2.00197993518006,1.14950487990897,1.32208974556972,1.90810750907073,3.98449078376614,4.11066032559657,1.91136614062614,3.96513985737078,2.24203425192614,2.89722493252585,5.90129310341499,7.46720449223413,5.96244347098577,7.02183280640848,3.2592226663359,3.31413464014313,7.79306913631645,4.12218690475142,2.3568472597987,0.886135578334485,0,8.06975314271754,6.37290803043403,10.6884637992389,8.5668505513613,9.56350182925673,14.828656316206,16.5875313415622,7.31748666634838,5.21222976408804,4.59864592322305,3.09264700934367,3.03623630423403,5.09704662918555,1.95325036156926,2.85135613334512,7.37818083481087,4.47953139040464,7.49584359314075,4.02521328474829,4.10563998460523,4.43534835094411,3.20928234940209,4.92402973201517,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.785874452986276,0,0,0.324547393654683,0,0,0.715471872916026,1.71598473234038,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530119073285941,0.116193942869518,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0.283550194484773,0,0,0,0.985326475791887,0.528290604079356,0.829312462163088,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,1.12085143993527,4.13764596424047,1.50939302401662,2.43851768931522,0,1.30139853857622,0.773288812777695,0.335032530668698,0,2.24702107184155,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9624326269493,4.31428401637234,3.41528184971022,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.309123034943167,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,2.02979043692868,3.82318603571188,1.13929437434833,3.09701308095126,4.52498500394814,4.53931317834902,2.16012574895246,1.58625035258854,0,0,0,0,0,13.8726594529408,5.26106700005114,5.9873811429845,2.2980644415884,1.05836791361941,5.843194924942,4.21195767170188,12.7811420258588,2.0368386450493,2.50634477090067,4.23229444504008,0.321176150207399,6.25579092292247,5.96184732766457,2.06103206853459,13.5185936295722,11.1838053946208,13.8484787620884,3.71237381263877,0,7.38524393686274,0.540911356951966,7.32758329595204,0,0,0,0,0,0,0,0.296964680832639,0,0.994147647766298,0.281338832821026,0.222617410045812,2.96646973608167,0,0.398495976502139,1.10513566212459,1.51159648712566,0,0,0,0,0,31.7174869540661,0.591860433821602,2.3948309234694,0,1.93866549219044,0.649376687132959,7.98455192004777,0,0,0,0,0,0,1.03423011972439,0.291604613383254,0,0,0,0,0,0.295547618953547,0.219385397153973,0,0.139423744278603,0.230850775511391,0,0,0,0.108647371922008,0,0,0,6.13159789174419,4.86638794824577,0.332423363800313,0,0,0,0.37950746544837,0,0,0,0,0,2.98578579323551,0.442287822516696,1.22206028986725,0.296521128680622,0.123563938946503,0.208843899010911,0,0,0,0.547364367646998,0,0.728341138602278,0.394584402849391,1.20990716048664,3.67287313956588,0.063186579628488,0.300646838828985,0.933193722575224,0,0.330991955875499,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.387956065953678,0,0.451961481561065,0.548167698587004,0.596143835108969,0.443175571691151,0,0.320635281006135,1.06726497369676,0,0.144090417154106,0,1.54435498075768,0,0.124252535565433,0,0.135904206073614,0.209205692624666,0,0,0.600420288709789,0,16.6070564487064,0,3.15464825135177,0,0,0,0,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0.412618309791701,0.415440338029185,0.674921674654501,0,0.425246896606173,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0.213574825135389,0.78602152549833,1.24271716604159,5.95399226174341,0,0.365377795142688,0.638341257770182,0,0,0,0,0,1.77213635993397,1.22026264901963,0.625954653532499,0,0.110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| ||
|short_description=p4@TBC1D5 | |short_description=p4@TBC1D5 | ||
}} | }} |
Latest revision as of 03:17, 17 September 2015
Short description: | p4@TBC1D5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TBC1D5_5end |
Coexpression cluster: | C712_thymus_biphenotypic_CD4_non_granulocyte_merkel_acute |
Association with transcript: | -15bp_to_ENST00000414318_5end |
EntrezGene: | TBC1D5 |
HGNC: | 19166 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 6.85e-30 | 25 |
pro-T cell | 6.85e-30 | 25 |
hematopoietic stem cell | 9.02e-29 | 168 |
lymphoid lineage restricted progenitor cell | 1.13e-26 | 52 |
hematopoietic cell | 3.56e-26 | 177 |
lymphocyte | 6.00e-26 | 53 |
common lymphoid progenitor | 6.00e-26 | 53 |
hematopoietic oligopotent progenitor cell | 1.90e-25 | 161 |
hematopoietic multipotent progenitor cell | 1.90e-25 | 161 |
mature alpha-beta T cell | 1.41e-23 | 18 |
alpha-beta T cell | 1.41e-23 | 18 |
immature T cell | 1.41e-23 | 18 |
mature T cell | 1.41e-23 | 18 |
immature alpha-beta T cell | 1.41e-23 | 18 |
nongranular leukocyte | 1.14e-18 | 115 |
leukocyte | 1.66e-17 | 136 |
CD8-positive, alpha-beta T cell | 3.07e-15 | 11 |
hematopoietic lineage restricted progenitor cell | 2.11e-14 | 120 |
CD4-positive, alpha-beta T cell | 3.06e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 3.68e-11 | 15 |
haemolymphatic fluid | 3.68e-11 | 15 |
organism substance | 3.68e-11 | 15 |
thymus | 8.39e-07 | 4 |
hemolymphoid system gland | 8.39e-07 | 4 |
thymic region | 8.39e-07 | 4 |
pharyngeal gland | 8.39e-07 | 4 |
thymus primordium | 8.39e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.29e-18 | 39 |
myeloid leukemia | 3.22e-15 | 31 |
hematologic cancer | 9.39e-15 | 51 |
immune system cancer | 9.39e-15 | 51 |