FFCP PHASE1:Hg19::chr2:136875712..136875725,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7852 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2561 | |||
|TSSclassifier=strong | |||
|UniProt=P61073 | |||
|association_with_transcript=0bp_to_ENST00000537957,NM_003467,uc002tuz.2_5end | |||
|cluster_id=chr2:136875712..136875725,- | |||
|coexpression_cluster_id=C175 | |||
|description=CAGE_peak_1_at_CXCR4_5end | |||
|id=chr2:136875712..136875725,- | |||
|ontology_enrichment_celltype=CL:0000738!7.80e-56!140;CL:0000037!4.60e-52!172;CL:0000566!4.60e-52!172;CL:0000988!6.07e-49!182;CL:0002087!1.83e-48!119;CL:0002032!1.62e-47!165;CL:0000837!1.62e-47!165;CL:0002031!1.75e-44!124;CL:0000766!8.35e-25!76;CL:0000542!6.27e-24!53;CL:0000051!6.27e-24!53;CL:0000838!1.50e-23!52;CL:0000763!8.18e-23!112;CL:0000049!8.18e-23!112;CL:0002194!1.48e-21!63;CL:0000576!1.48e-21!63;CL:0000040!1.48e-21!63;CL:0000559!1.48e-21!63;CL:0002009!1.54e-21!65;CL:0000839!2.71e-20!70;CL:0000860!4.47e-20!45;CL:0002057!6.28e-20!42;CL:0000557!7.53e-20!71;CL:0000084!4.30e-12!25;CL:0000827!4.30e-12!25;CL:0000791!2.75e-11!18;CL:0000789!2.75e-11!18;CL:0002420!2.75e-11!18;CL:0002419!2.75e-11!18;CL:0000790!2.75e-11!18;CL:0000945!6.72e-11!24;CL:0000826!6.72e-11!24;CL:0000236!4.71e-09!14;CL:0000625!5.12e-07!11;CL:0000094!6.55e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000542;4.60e-15;53!CL:0000860;5.17e-15;33!CL:0002057;5.17e-15;33!CL:0000576;2.31e-14;48!CL:0002087;2.75e-14;104!CL:0000473;6.20e-14;39!CL:0000234;6.20e-14;39!CL:0000084;1.35e-12;25!CL:0000738;3.68e-12;136!CL:0000791;1.20e-11;18!CL:0000789;1.20e-11;18!CL:0002419;1.20e-11;18!CL:0000945;2.93e-11;24!CL:0000766;3.76e-11;69!CL:0000236;3.70e-09;13!CL:0000988;1.11e-08;177!CL:0000763;2.00e-07;100!CL:0000625;3.20e-07;11!CL:0000094;4.15e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.71e-58,136;CL:0000037,4.24e-54,168;CL:0002087,2.41e-51,115;CL:0000988,1.18e-50,177;CL:0002032,2.26e-49,161;CL:0000837,2.26e-49,161;CL:0002031,1.81e-46,120;CL:0000766,5.58e-26,72;CL:0000542,7.25e-25,53;CL:0000051,7.25e-25,53;CL:0000838,1.79e-24,52;CL:0000763,1.34e-23,108;CL:0000049,1.34e-23,108;CL:0002194,3.25e-23,59;CL:0000576,3.25e-23,59;CL:0000040,3.25e-23,59;CL:0000559,3.25e-23,59;CL:0002009,3.72e-23,61;CL:0000473,4.14e-22,48;CL:0000234,4.14e-22,48;CL:0000839,3.20e-21,66;CL:0000557,9.80e-21,67;CL:0000860,1.32e-20,42;CL:0002057,1.32e-20,42;CL:0000084,1.37e-12,25;CL:0000827,1.37e-12,25;CL:0000791,1.21e-11,18;CL:0000789,1.21e-11,18;CL:0002420,1.21e-11,18;CL:0002419,1.21e-11,18;CL:0000790,1.21e-11,18;CL:0000945,3.05e-11,24;CL:0000826,3.05e-11,24;CL:0000236,2.49e-09,14;CL:0000625,3.22e-07,11;CL:0000094,4.15e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.49e-15;42!CL:0000051;4.60e-15;53!CL:0000790;1.20e-11;18!CL:0000049;1.81e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.85e-25!102;UBERON:0003061!2.85e-25!102;UBERON:0002193!2.20e-24!112;UBERON:0002371!1.91e-15!80;UBERON:0002405!8.42e-14!115;UBERON:0001474!7.43e-13!86;UBERON:0007023!1.13e-10!115;UBERON:0003081!7.93e-10!216;UBERON:0000178!8.61e-09!15;UBERON:0000179!8.61e-09!15;UBERON:0000463!8.61e-09!15;UBERON:0004765!7.65e-08!101;UBERON:0001434!7.65e-08!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.66e-09;15!UBERON:0000179;4.66e-09;15!UBERON:0000463;4.66e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.43e-27,98;UBERON:0003061,7.43e-27,98;UBERON:0002193,1.14e-25,108;UBERON:0002405,1.72e-18,93;UBERON:0002371,1.71e-16,76;UBERON:0001474,1.50e-13,82;UBERON:0003081,2.62e-12,203;UBERON:0007023,4.46e-11,114;UBERON:0004765,7.64e-10,90;UBERON:0000178,4.66e-09,15;UBERON:0000179,4.66e-09,15;UBERON:0000463,4.66e-09,15;UBERON:0001434,4.90e-07,100 | |||
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| |||
|short_description=p1@CXCR4 | |||
}} |
Latest revision as of 03:09, 17 September 2015
Short description: | p1@CXCR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CXCR4_5end |
Coexpression cluster: | C175_Eosinophils_Neutrophils_CD4_Basophils_CD19_CD8_Natural |
Association with transcript: | 0bp_to_ENST00000537957, NM_003467, uc002tuz.2_5end |
EntrezGene: | CXCR4 |
HGNC: | 2561 |
UniProt: | P61073 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.43e-27 | 98 |
blood island | 7.43e-27 | 98 |
hemolymphoid system | 1.14e-25 | 108 |
immune system | 1.72e-18 | 93 |
bone marrow | 1.71e-16 | 76 |
bone element | 1.50e-13 | 82 |
lateral plate mesoderm | 2.62e-12 | 203 |
adult organism | 4.46e-11 | 114 |
skeletal element | 7.64e-10 | 90 |
blood | 4.66e-09 | 15 |
haemolymphatic fluid | 4.66e-09 | 15 |
organism substance | 4.66e-09 | 15 |
skeletal system | 4.90e-07 | 100 |