FFCP PHASE1:Hg19::chr6:20403997..20404008,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:20403997..20404008,+
|short_description=p7@E2F3
|description=CAGE_peak_7_at_E2F3_5end
|association_with_transcript=-25bp_to_ENST00000535432,NM_001243076_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1871 | |EntrezGene=1871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3115 | |HGNC=3115 | ||
|TSSclassifier=strong | |||
|UniProt=Q68DT0 | |UniProt=Q68DT0 | ||
|association_with_transcript=-25bp_to_ENST00000535432,NM_001243076_5end | |||
|cluster_id=chr6:20403997..20404008,+ | |||
|description=CAGE_peak_7_at_E2F3_5end | |||
|id=chr6:20403997..20404008,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.29e-17!76;CL:0000839!3.22e-13!70;CL:0000763!9.04e-13!112;CL:0000049!9.04e-13!112;CL:0000557!9.73e-13!71;CL:0000860!1.85e-12!45;CL:0002194!6.77e-12!63;CL:0000576!6.77e-12!63;CL:0000040!6.77e-12!63;CL:0000559!6.77e-12!63;CL:0002057!8.44e-12!42;CL:0002009!5.77e-11!65 | |||
|ontology_enrichment_celltype_v019=CL:0000775;5.60e-23;3!CL:0000860;8.70e-23;33!CL:0002057;8.70e-23;33!CL:0000473;1.23e-19;39!CL:0000234;1.23e-19;39!CL:0000576;3.66e-19;48!CL:0000766;8.43e-16;69!CL:0000094;3.29e-15;8!CL:0000081;4.22e-11;11!CL:0002619;2.26e-10;3!CL:1001319;6.02e-09;1!CL:1000600;6.02e-09;1!CL:0000763;1.26e-08;100!CL:0000511;2.12e-08;1!CL:0002625;2.12e-08;1!CL:0000216;2.12e-08;1!CL:0000738;4.84e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.02e-35,72;CL:0002194,4.51e-27,59;CL:0000576,4.51e-27,59;CL:0000040,4.51e-27,59;CL:0000559,4.51e-27,59;CL:0000473,3.22e-26,48;CL:0000234,3.22e-26,48;CL:0002009,4.22e-26,61;CL:0000839,6.29e-24,66;CL:0000557,1.57e-23,67;CL:0000775,4.19e-23,3;CL:0000763,1.72e-22,108;CL:0000049,1.72e-22,108;CL:0000860,4.82e-22,42;CL:0002057,4.82e-22,42;CL:0000738,4.01e-17,136;CL:0000094,2.85e-15,8;CL:0002032,6.79e-14,161;CL:0000837,6.79e-14,161;CL:0000037,3.67e-13,168;CL:0002087,1.55e-12,115;CL:0000988,2.65e-12,177;CL:0002031,6.84e-12,120;CL:0000081,3.81e-11,11;CL:0002619,2.16e-10,3;CL:1001319,6.03e-09,1;CL:1000600,6.03e-09,1;CL:0000511,1.48e-08,1;CL:0002625,1.48e-08,1;CL:0000216,1.48e-08,1 | |||
|ontology_enrichment_development_v019=CL:0002057;6.24e-16;42!CL:0000049;6.04e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!5.68e-11!101;UBERON:0001434!5.68e-11!101;UBERON:0001474!9.27e-11!86;UBERON:0002371!9.41e-11!80;UBERON:0002390!2.65e-09!102;UBERON:0003061!2.65e-09!102;UBERON:0002193!3.48e-08!112;UBERON:0002204!8.89e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;6.02e-09;1!UBERON:0001256;6.02e-09;1!UBERON:0001259;6.02e-09;1!UBERON:0001136;2.12e-08;1!UBERON:0001343;2.12e-08;1!UBERON:0004910;2.12e-08;1!UBERON:0004813;2.12e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.00e-20,76;UBERON:0001474,9.93e-19,82;UBERON:0002390,2.56e-17,98;UBERON:0003061,2.56e-17,98;UBERON:0004765,8.15e-17,90;UBERON:0002405,3.51e-16,93;UBERON:0002193,1.97e-15,108;UBERON:0001434,7.54e-15,100;UBERON:0004645,6.03e-09,1;UBERON:0001256,6.03e-09,1;UBERON:0001259,6.03e-09,1;UBERON:0002204,6.21e-09,167;UBERON:0003081,6.62e-09,203;UBERON:0001136,1.48e-08,1;UBERON:0001343,1.48e-08,1;UBERON:0004910,1.48e-08,1;UBERON:0005154,1.48e-08,1;UBERON:0005295,1.48e-08,1;UBERON:0004813,1.48e-08,1;UBERON:0005297,1.48e-08,1;UBERON:0005294,1.48e-08,1;UBERON:0010141,1.48e-08,1;UBERON:0005891,1.48e-08,1 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0.893922188854576,0,0,0,0,0,0,0,0.527533956456907,0.123766352960047,0.331397375727916,0,0,0,0.487932798790507,0,0.204000691244253,0,0,0,0.125542639594803,0,0.0821005894499457,0,0.393364276848904,0.767658796194425,0.464448369948228,0.919421224478927,0,0.369754010166788,0.232401601740905,0.284338464974843,0.293600439334847,2.76997704265939,0.601633342410425,0,1.34349284543955,0.32389366601898,1.28787783817093,1.45398238779565,1.13362783106643,0.242584061187816,1.62700325833979,0.411167888021826,1.23882548358041,1.43846196161075,0.768482119587302,0.236482229888585,0.689491361473237,0.645484683583826,0,1.12945403725563,1.09162460023138,1.79778787556068,1.83650335422542,0,0.639337125799041,0,0.997318288108159,0.852449501065388,0.580418477257168,1.13477044938228,1.24564449799115,0.502497330513487,0,0.868755378820466,0,0,0.632924774881769,0.211255286311942,0.425208599930087,0,0.336985893439485,0.150176892841506,0.32145117339416,0.570025487482497,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,1.68152568894461,0,0,0,0,0.501559486172034,0,0.473447805734733,0,0.222820913770347,0,0,0.270803863765016,0.25618263945135,0,0.328875809207352,0.276350017785848,0.289803085735052,0,0.267540828089713,0,0.226618685395132,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0.473554504088034,0,0.80642697289893,0,0,2.43806866313962,0,0,0,0,0.144846518960824,0,0.486634870302636,0.378139268656271,0,0.087834785693126,0.392937226493138,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0.760272105718513,0,0.367663080345869,0,0.17859945656816,0.22452937262617,0,0,0,0.366403487860815,5.27121669744253,0,0,0,0.25326102332916,0.397227542439656,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0.468642863667593,0,0,0.149448680551801,0,0,0.280901613404497,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0.831192346452549,0,0,0.150238058906597,0.113432183160021,0,0,0.211931901159562,0.600182192168805,0.412210116953756,0,0.18611685633159,0.506328996723799,0.194874010322397,0.252433774244115,0.0920498986422993,0.646584227275248,0.355009592516614,0.201504196455281,0,0,0,0.286804595389004,0.121973706129595,0.530119073285941,0.232387885739037,0.207322110030741,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0.439001141634502,0,0,0.185176890317059,0.325808305310325,0,0,0,0.234817388471643,0.288732895522148,0,0.190254152234598,0.790204397959275,0,0,0.234004265139238,0,0.93733833986777,0,0.425325291727159,0.179117045405697,0.581267877027924,0,0.985326475791887,0.352193736052904,0.414656231081544,0.720599767084807,0.75745460055828,0.190493682876507,0.381988425558278,0,0,0.205654985406647,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0.266422179016099,0.428933980974443,0,0,0,0,0,0,0,0.199945982364114,1.2162378064119,0.502257091432126,2.10833939483032,0.479249710983165,0,0,0.144781306667579,0.205476322550383,0,0.224170287987055,0.394061520403854,0,0.128343036279748,0.254094624222463,0,0,0,0,2.99602809578873,2.99161459204025,2.48649308061621,0,0,0.542530047399471,0,0,0,0.234282829985426,0.902838299183157,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.128139149255701,1.02341449813341,0.321707842287215,0,0.308419387605311,0.355123450626254,0.0821271560138091,0,0.348631135379878,0.120859449591622,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0.447749509444357,0,0,0,0.328014645699706,0,0,0.0915694648183434,0.41254749960294,0,0,1.6068392984416,0,0.154048617114644,0.307007349452259,0,0.322260734604821,0,0.170453254832202,0.267096106940212,0.330569830721956,0.192190067365106,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0.18532421910392,0.286249773483982,0,0.316379424718726,0.38126038784765,0,0,0.318203247925937,0,0.359744915166629,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0.487426979262569,0,0.682499557039929,0,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0.573645408816206,0.392996164052485,0,0,0.211107635297664,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0,0,0,0.411362273086194,0,0,0,0.213648142254946,0,0,0,0.144269212976445,0.213425530045242,0,0.399158742865633,0.5745161103971,0.423347165447766,0.324621940274555,0,0.456469358066384,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0,0,0,0.270455678475983,0.33307196799782,0,0,0.293016358543788,0.121360521749513,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.715880777515084,0,0.311039587661807,0.359473404589307,0.358042349351218,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0.254253650292766,0.472775363535873,0,0,0.520874984799877,0,0,0,0,0,0.438770794307945,0.10893846351899,0.139423744278603,0,0.113942055847001,0,0.359030577639089,0.108647371922008,0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| ||
|short_description=p7@E2F3 | |||
}} | }} |
Latest revision as of 03:08, 17 September 2015
Short description: | p7@E2F3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_E2F3_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_ENST00000535432, NM_001243076_5end |
EntrezGene: | E2F3 |
HGNC: | 3115 |
UniProt: | Q68DT0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.00e-20 | 76 |
bone element | 9.93e-19 | 82 |
hematopoietic system | 2.56e-17 | 98 |
blood island | 2.56e-17 | 98 |
skeletal element | 8.15e-17 | 90 |
immune system | 3.51e-16 | 93 |
hemolymphoid system | 1.97e-15 | 108 |
skeletal system | 7.54e-15 | 100 |
urinary bladder urothelium | 6.03e-09 | 1 |
wall of urinary bladder | 6.03e-09 | 1 |
mucosa of urinary bladder | 6.03e-09 | 1 |
musculoskeletal system | 6.21e-09 | 167 |
lateral plate mesoderm | 6.62e-09 | 203 |
mesothelium | 1.48e-08 | 1 |
seminiferous tubule of testis | 1.48e-08 | 1 |
epithelium of male gonad | 1.48e-08 | 1 |
epithelial cord | 1.48e-08 | 1 |
sex cord | 1.48e-08 | 1 |
seminiferous tubule epithelium | 1.48e-08 | 1 |
testis sex cord | 1.48e-08 | 1 |
genital ridge | 1.48e-08 | 1 |
primitive sex cord of indifferent gonad | 1.48e-08 | 1 |
coelomic epithelium | 1.48e-08 | 1 |