FFCP PHASE1:Hg19::chr6:20403916..20403965,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1871 | |EntrezGene=1871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3115 | |HGNC=3115 | ||
|TSSclassifier=strong | |||
|UniProt=Q68DT0 | |UniProt=Q68DT0 | ||
|association_with_transcript=-68bp_to_ENST00000535432,NM_001243076_5end | |association_with_transcript=-68bp_to_ENST00000535432,NM_001243076_5end | ||
|cluster_id=chr6:20403916..20403965,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_3_at_E2F3_5end | |description=CAGE_peak_3_at_E2F3_5end | ||
|id=chr6:20403916..20403965,+ | |id=chr6:20403916..20403965,+ | ||
|ontology_enrichment_celltype=CL:0000763!4.13e-28!112;CL:0000049!4.13e-28!112;CL:0000766!1.39e-27!76;CL:0000037!1.47e-24!172;CL:0000566!1.47e-24!172;CL:0002032!2.12e-23!165;CL:0000837!2.12e-23!165;CL:0002057!1.47e-22!42;CL:0000839!3.29e-22!70;CL:0002194!1.73e-21!63;CL:0000576!1.73e-21!63;CL:0000040!1.73e-21!63;CL:0000559!1.73e-21!63;CL:0000557!2.16e-21!71;CL:0000860!4.71e-21!45;CL:0000988!7.59e-21!182;CL:0002009!8.63e-20!65;CL:0000738!2.59e-19!140;CL:0000003!7.34e-19!722;CL:0002087!1.18e-16!119;CL:0002031!1.03e-15!124;CL:0000063!5.71e-15!578;CL:0000012!1.69e-14!682;CL:0000548!2.40e-13!679;CL:0000004!2.40e-13!679;CL:0000255!2.40e-13!679;CL:0000144!2.02e-12!625;CL:0000034!1.10e-11!444;CL:0000134!1.33e-11!358;CL:0000723!9.27e-11!436;CL:0000048!1.10e-10!430;CL:0002320!1.74e-10!365;CL:0000219!2.47e-10!390;CL:0002371!1.61e-09!591 | |ontology_enrichment_celltype=CL:0000763!4.13e-28!112;CL:0000049!4.13e-28!112;CL:0000766!1.39e-27!76;CL:0000037!1.47e-24!172;CL:0000566!1.47e-24!172;CL:0002032!2.12e-23!165;CL:0000837!2.12e-23!165;CL:0002057!1.47e-22!42;CL:0000839!3.29e-22!70;CL:0002194!1.73e-21!63;CL:0000576!1.73e-21!63;CL:0000040!1.73e-21!63;CL:0000559!1.73e-21!63;CL:0000557!2.16e-21!71;CL:0000860!4.71e-21!45;CL:0000988!7.59e-21!182;CL:0002009!8.63e-20!65;CL:0000738!2.59e-19!140;CL:0000003!7.34e-19!722;CL:0002087!1.18e-16!119;CL:0002031!1.03e-15!124;CL:0000063!5.71e-15!578;CL:0000012!1.69e-14!682;CL:0000548!2.40e-13!679;CL:0000004!2.40e-13!679;CL:0000255!2.40e-13!679;CL:0000144!2.02e-12!625;CL:0000034!1.10e-11!444;CL:0000134!1.33e-11!358;CL:0000723!9.27e-11!436;CL:0000048!1.10e-10!430;CL:0002320!1.74e-10!365;CL:0000219!2.47e-10!390;CL:0002371!1.61e-09!591 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.82e-20;33!CL:0002057;1.82e-20;33!CL:0000473;4.40e-18;39!CL:0000234;4.40e-18;39!CL:0000576;3.02e-14;48!CL:0000766;4.34e-13;69!CL:0000763;3.72e-11;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.49e-28,108;CL:0000049,1.49e-28,108;CL:0000766,2.04e-28,72;CL:0000037,1.37e-24,168;CL:0000473,8.28e-24,48;CL:0000234,8.28e-24,48;CL:0002032,1.95e-23,161;CL:0000837,1.95e-23,161;CL:0000839,6.58e-23,66;CL:0000860,1.42e-22,42;CL:0002057,1.42e-22,42;CL:0002194,2.87e-22,59;CL:0000576,2.87e-22,59;CL:0000040,2.87e-22,59;CL:0000559,2.87e-22,59;CL:0000557,4.21e-22,67;CL:0000988,4.13e-21,177;CL:0002009,1.62e-20,61;CL:0000738,2.31e-19,136;CL:0002087,9.82e-17,115;CL:0002031,8.34e-16,120;CL:0000134,6.54e-12,354;CL:0000034,6.86e-12,441;CL:0000723,5.86e-11,433;CL:0000048,6.96e-11,427;CL:0002320,9.23e-11,361;CL:0000219,1.23e-10,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.23e-16;42!CL:0000049;4.43e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.91e-22!102;UBERON:0003061!7.91e-22!102;UBERON:0002193!9.41e-22!112;UBERON:0002371!5.70e-20!80;UBERON:0001474!1.35e-18!86;UBERON:0004765!6.78e-17!101;UBERON:0001434!6.78e-17!101;UBERON:0002405!5.68e-15!115;UBERON:0003081!1.53e-14!216;UBERON:0002384!7.58e-11!375;UBERON:0002204!8.21e-11!167 | |ontology_enrichment_uberon=UBERON:0002390!7.91e-22!102;UBERON:0003061!7.91e-22!102;UBERON:0002193!9.41e-22!112;UBERON:0002371!5.70e-20!80;UBERON:0001474!1.35e-18!86;UBERON:0004765!6.78e-17!101;UBERON:0001434!6.78e-17!101;UBERON:0002405!5.68e-15!115;UBERON:0003081!1.53e-14!216;UBERON:0002384!7.58e-11!375;UBERON:0002204!8.21e-11!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.88e-22,98;UBERON:0003061,2.88e-22,98;UBERON:0002193,3.98e-22,108;UBERON:0002371,1.64e-20,76;UBERON:0002405,3.28e-20,93;UBERON:0001474,4.94e-19,82;UBERON:0004765,2.24e-17,90;UBERON:0001434,2.13e-16,100;UBERON:0003081,3.09e-14,203;UBERON:0002384,4.01e-11,371;UBERON:0002204,2.33e-10,167;UBERON:0000926,1.54e-07,315;UBERON:0004120,1.54e-07,315;UBERON:0006603,1.54e-07,315 | |||
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| ||
|short_description=p3@E2F3 | |short_description=p3@E2F3 | ||
}} | }} |
Latest revision as of 03:07, 17 September 2015
Short description: | p3@E2F3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_E2F3_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -68bp_to_ENST00000535432, NM_001243076_5end |
EntrezGene: | E2F3 |
HGNC: | 3115 |
UniProt: | Q68DT0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.49e-28 | 108 |
common myeloid progenitor | 1.49e-28 | 108 |
myeloid leukocyte | 2.04e-28 | 72 |
hematopoietic stem cell | 1.37e-24 | 168 |
defensive cell | 8.28e-24 | 48 |
phagocyte | 8.28e-24 | 48 |
hematopoietic oligopotent progenitor cell | 1.95e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.95e-23 | 161 |
myeloid lineage restricted progenitor cell | 6.58e-23 | 66 |
classical monocyte | 1.42e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.42e-22 | 42 |
monopoietic cell | 2.87e-22 | 59 |
monocyte | 2.87e-22 | 59 |
monoblast | 2.87e-22 | 59 |
promonocyte | 2.87e-22 | 59 |
granulocyte monocyte progenitor cell | 4.21e-22 | 67 |
hematopoietic cell | 4.13e-21 | 177 |
macrophage dendritic cell progenitor | 1.62e-20 | 61 |
leukocyte | 2.31e-19 | 136 |
nongranular leukocyte | 9.82e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 8.34e-16 | 120 |
mesenchymal cell | 6.54e-12 | 354 |
stem cell | 6.86e-12 | 441 |
somatic stem cell | 5.86e-11 | 433 |
multi fate stem cell | 6.96e-11 | 427 |
connective tissue cell | 9.23e-11 | 361 |
motile cell | 1.23e-10 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.88e-22 | 98 |
blood island | 2.88e-22 | 98 |
hemolymphoid system | 3.98e-22 | 108 |
bone marrow | 1.64e-20 | 76 |
immune system | 3.28e-20 | 93 |
bone element | 4.94e-19 | 82 |
skeletal element | 2.24e-17 | 90 |
skeletal system | 2.13e-16 | 100 |
lateral plate mesoderm | 3.09e-14 | 203 |
connective tissue | 4.01e-11 | 371 |
musculoskeletal system | 2.33e-10 | 167 |
mesoderm | 1.54e-07 | 315 |
mesoderm-derived structure | 1.54e-07 | 315 |
presumptive mesoderm | 1.54e-07 | 315 |