FFCP PHASE1:Hg19::chr17:6939502..6939520,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=201232 | |EntrezGene=201232 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31037 | |HGNC=31037 | ||
|TSSclassifier=strong | |||
|UniProt=Q7RTY0 | |UniProt=Q7RTY0 | ||
|association_with_transcript=25bp_to_ENST00000308027_5end | |association_with_transcript=25bp_to_ENST00000308027_5end | ||
|cluster_id=chr17:6939502..6939520,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_3_at_SLC16A13_5end | |description=CAGE_peak_3_at_SLC16A13_5end | ||
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|ontology_enrichment_celltype=CL:0000066!5.92e-37!254;CL:0000223!6.82e-14!59;CL:0000115!1.04e-13!35;CL:0002078!1.87e-13!44;CL:0000076!1.51e-12!62;CL:0002321!2.02e-12!248;CL:0002139!2.14e-12!24;CL:0000220!2.14e-12!246;CL:0000213!7.62e-11!57;CL:0000215!7.62e-11!57;CL:0000071!5.90e-09!18;CL:0002546!5.90e-09!18;CL:0002076!1.10e-08!43;CL:0002681!7.16e-07!13;CL:0002584!7.16e-07!13 | |ontology_enrichment_celltype=CL:0000066!5.92e-37!254;CL:0000223!6.82e-14!59;CL:0000115!1.04e-13!35;CL:0002078!1.87e-13!44;CL:0000076!1.51e-12!62;CL:0002321!2.02e-12!248;CL:0002139!2.14e-12!24;CL:0000220!2.14e-12!246;CL:0000213!7.62e-11!57;CL:0000215!7.62e-11!57;CL:0000071!5.90e-09!18;CL:0002546!5.90e-09!18;CL:0002076!1.10e-08!43;CL:0002681!7.16e-07!13;CL:0002584!7.16e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000115;5.47e-21;36!CL:0002139;3.58e-20;24!CL:0002078;3.33e-15;45!CL:0000071;1.57e-13;18!CL:0002681;1.34e-12;12!CL:0002584;1.34e-12;12!CL:1000449;1.81e-09;15!CL:0000213;9.28e-09;58!CL:0000215;9.28e-09;58!CL:0002138;1.65e-08;6!CL:0002159;2.01e-08;14!CL:1000497;5.18e-08;17!CL:0002518;5.18e-08;17!CL:0000182;6.17e-08;12!CL:0002188;1.19e-07;5!CL:0002543;1.94e-07;6!CL:1000746;5.05e-07;7!CL:1000612;5.05e-07;7!CL:0002368;5.73e-07;13!CL:0002202;7.09e-07;9!CL:0002632;7.09e-07;9 | |ontology_enrichment_celltype_v019=CL:0000115;5.47e-21;36!CL:0002139;3.58e-20;24!CL:0002078;3.33e-15;45!CL:0000071;1.57e-13;18!CL:0002681;1.34e-12;12!CL:0002584;1.34e-12;12!CL:1000449;1.81e-09;15!CL:0000213;9.28e-09;58!CL:0000215;9.28e-09;58!CL:0002138;1.65e-08;6!CL:0002159;2.01e-08;14!CL:1000497;5.18e-08;17!CL:0002518;5.18e-08;17!CL:0000182;6.17e-08;12!CL:0002188;1.19e-07;5!CL:0002543;1.94e-07;6!CL:1000746;5.05e-07;7!CL:1000612;5.05e-07;7!CL:0002368;5.73e-07;13!CL:0002202;7.09e-07;9!CL:0002632;7.09e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.94e-33,253;CL:0000115,2.22e-25,36;CL:0002078,1.93e-23,45;CL:0002139,1.64e-20,24;CL:0000223,6.96e-16,58;CL:0002321,1.23e-14,250;CL:0000071,7.40e-14,18;CL:0002546,7.40e-14,18;CL:0000213,2.57e-13,58;CL:0000215,2.57e-13,58;CL:0002681,2.13e-12,12;CL:0002584,2.13e-12,12;CL:0000076,6.28e-11,63;CL:1000449,2.57e-09,15;CL:0002159,1.53e-08,14;CL:0005020,1.71e-08,6;CL:0002138,1.71e-08,6;CL:0005022,1.71e-08,6;CL:0002076,2.15e-08,42;CL:0000182,6.21e-08,12;CL:1000497,6.97e-08,17;CL:0002518,6.97e-08,17;CL:0002188,9.24e-08,5;CL:0002543,1.27e-07,6;CL:1000746,5.88e-07,7;CL:1000612,5.88e-07,7;CL:0002368,6.19e-07,13;CL:0002202,9.41e-07,9;CL:0002632,9.41e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;1.57e-13;18!CL:0000223;8.36e-10;58!CL:0005022;1.65e-08;6 | |ontology_enrichment_development_v019=CL:0002546;1.57e-13;18!CL:0000223;8.36e-10;58!CL:0005022;1.65e-08;6 | ||
|ontology_enrichment_disease=DOID:305!1.10e-09!106;DOID:0050687!4.13e-07!143 | |ontology_enrichment_disease=DOID:305!1.10e-09!106;DOID:0050687!4.13e-07!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.98e-25!169;UBERON:0000925!1.98e-25!169;UBERON:0006595!1.98e-25!169;UBERON:0001007!2.68e-22!155;UBERON:0001555!2.68e-22!155;UBERON:0007026!2.68e-22!155;UBERON:0004921!2.45e-19!129;UBERON:0004185!2.45e-19!129;UBERON:0000077!7.17e-19!130;UBERON:0001048!2.32e-17!168;UBERON:0000466!6.61e-17!126;UBERON:0001041!1.46e-16!98;UBERON:0005177!1.23e-14!107;UBERON:0000481!1.64e-13!347;UBERON:0003104!6.29e-13!238;UBERON:0009142!6.29e-13!238;UBERON:0000477!1.19e-12!286;UBERON:0005911!1.20e-12!82;UBERON:0001004!1.36e-12!72;UBERON:0009569!2.11e-12!113;UBERON:0000464!6.07e-12!104;UBERON:0005172!1.13e-11!55;UBERON:0005173!1.13e-11!55;UBERON:0004111!2.07e-10!241;UBERON:0003914!3.66e-10!118;UBERON:0003929!6.56e-10!54;UBERON:0002365!1.04e-09!31;UBERON:0002330!1.04e-09!31;UBERON:0000065!1.62e-09!53;UBERON:0002530!4.75e-09!59;UBERON:0000483!5.13e-09!309;UBERON:0002417!5.18e-09!61;UBERON:0000916!5.18e-09!61;UBERON:0001986!5.90e-09!18;UBERON:0004638!5.90e-09!18;UBERON:0004852!5.90e-09!18;UBERON:0000119!8.25e-09!312;UBERON:0000487!2.34e-08!22;UBERON:0008947!2.43e-08!38;UBERON:0003258!2.43e-08!38;UBERON:0001008!5.59e-08!45;UBERON:0003103!6.65e-08!69;UBERON:0006554!9.05e-08!44;UBERON:0000161!9.57e-08!35;UBERON:0000072!9.90e-08!46;UBERON:0009497!1.67e-07!25;UBERON:0000015!1.67e-07!25;UBERON:0002423!1.67e-07!25;UBERON:0006235!1.67e-07!25;UBERON:0004161!1.67e-07!25;UBERON:0000353!2.21e-07!17;UBERON:0006914!2.86e-07!25;UBERON:0000468!4.33e-07!659;UBERON:0000064!5.15e-07!219;UBERON:0001225!7.16e-07!13;UBERON:0008987!7.16e-07!13;UBERON:0002553!8.05e-07!70;UBERON:0002100!9.31e-07!216 | |ontology_enrichment_uberon=UBERON:0004119!1.98e-25!169;UBERON:0000925!1.98e-25!169;UBERON:0006595!1.98e-25!169;UBERON:0001007!2.68e-22!155;UBERON:0001555!2.68e-22!155;UBERON:0007026!2.68e-22!155;UBERON:0004921!2.45e-19!129;UBERON:0004185!2.45e-19!129;UBERON:0000077!7.17e-19!130;UBERON:0001048!2.32e-17!168;UBERON:0000466!6.61e-17!126;UBERON:0001041!1.46e-16!98;UBERON:0005177!1.23e-14!107;UBERON:0000481!1.64e-13!347;UBERON:0003104!6.29e-13!238;UBERON:0009142!6.29e-13!238;UBERON:0000477!1.19e-12!286;UBERON:0005911!1.20e-12!82;UBERON:0001004!1.36e-12!72;UBERON:0009569!2.11e-12!113;UBERON:0000464!6.07e-12!104;UBERON:0005172!1.13e-11!55;UBERON:0005173!1.13e-11!55;UBERON:0004111!2.07e-10!241;UBERON:0003914!3.66e-10!118;UBERON:0003929!6.56e-10!54;UBERON:0002365!1.04e-09!31;UBERON:0002330!1.04e-09!31;UBERON:0000065!1.62e-09!53;UBERON:0002530!4.75e-09!59;UBERON:0000483!5.13e-09!309;UBERON:0002417!5.18e-09!61;UBERON:0000916!5.18e-09!61;UBERON:0001986!5.90e-09!18;UBERON:0004638!5.90e-09!18;UBERON:0004852!5.90e-09!18;UBERON:0000119!8.25e-09!312;UBERON:0000487!2.34e-08!22;UBERON:0008947!2.43e-08!38;UBERON:0003258!2.43e-08!38;UBERON:0001008!5.59e-08!45;UBERON:0003103!6.65e-08!69;UBERON:0006554!9.05e-08!44;UBERON:0000161!9.57e-08!35;UBERON:0000072!9.90e-08!46;UBERON:0009497!1.67e-07!25;UBERON:0000015!1.67e-07!25;UBERON:0002423!1.67e-07!25;UBERON:0006235!1.67e-07!25;UBERON:0004161!1.67e-07!25;UBERON:0000353!2.21e-07!17;UBERON:0006914!2.86e-07!25;UBERON:0000468!4.33e-07!659;UBERON:0000064!5.15e-07!219;UBERON:0001225!7.16e-07!13;UBERON:0008987!7.16e-07!13;UBERON:0002553!8.05e-07!70;UBERON:0002100!9.31e-07!216 | ||
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| ||
|short_description=p3@SLC16A13 | |short_description=p3@SLC16A13 | ||
}} | }} |
Latest revision as of 03:07, 17 September 2015
Short description: | p3@SLC16A13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC16A13_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 25bp_to_ENST00000308027_5end |
EntrezGene: | SLC16A13 |
HGNC: | 31037 |
UniProt: | Q7RTY0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.94e-33 | 253 |
endothelial cell | 2.22e-25 | 36 |
meso-epithelial cell | 1.93e-23 | 45 |
endothelial cell of vascular tree | 1.64e-20 | 24 |
endodermal cell | 6.96e-16 | 58 |
embryonic cell | 1.23e-14 | 250 |
blood vessel endothelial cell | 7.40e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.40e-14 | 18 |
lining cell | 2.57e-13 | 58 |
barrier cell | 2.57e-13 | 58 |
kidney cortical cell | 2.13e-12 | 12 |
renal cortical epithelial cell | 2.13e-12 | 12 |
squamous epithelial cell | 6.28e-11 | 63 |
epithelial cell of nephron | 2.57e-09 | 15 |
general ecto-epithelial cell | 1.53e-08 | 14 |
lymphangioblast | 1.71e-08 | 6 |
endothelial cell of lymphatic vessel | 1.71e-08 | 6 |
vascular lymphangioblast | 1.71e-08 | 6 |
endo-epithelial cell | 2.15e-08 | 42 |
hepatocyte | 6.21e-08 | 12 |
kidney cell | 6.97e-08 | 17 |
kidney epithelial cell | 6.97e-08 | 17 |
glomerular endothelial cell | 9.24e-08 | 5 |
vein endothelial cell | 1.27e-07 | 6 |
glomerular cell | 5.88e-07 | 7 |
kidney corpuscule cell | 5.88e-07 | 7 |
respiratory epithelial cell | 6.19e-07 | 13 |
epithelial cell of tracheobronchial tree | 9.41e-07 | 9 |
epithelial cell of lower respiratory tract | 9.41e-07 | 9 |