FFCP PHASE1:Hg19::chr6:20403826..20403886,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:20403826..20403886,+ to FFCP PHASE1:Hg19::chr6:20403826..20403886,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1871 | |EntrezGene=1871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3115 | |HGNC=3115 | ||
|TSSclassifier=strong | |||
|UniProt=Q68DT0 | |UniProt=Q68DT0 | ||
|association_with_transcript=-147bp_to_ENST00000535432,NM_001243076_5end | |||
|cluster_id=chr6:20403826..20403886,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_2_at_E2F3_5end | |||
|id=chr6:20403826..20403886,+ | |||
|ontology_enrichment_celltype=CL:0000766!8.40e-29!76;CL:0000763!1.26e-28!112;CL:0000049!1.26e-28!112;CL:0002057!3.57e-26!42;CL:0000037!4.31e-24!172;CL:0000566!4.31e-24!172;CL:0000839!7.25e-24!70;CL:0002194!7.87e-24!63;CL:0000576!7.87e-24!63;CL:0000040!7.87e-24!63;CL:0000559!7.87e-24!63;CL:0000557!2.56e-23!71;CL:0002009!1.78e-22!65;CL:0000860!4.15e-22!45;CL:0002032!5.64e-22!165;CL:0000837!5.64e-22!165;CL:0000988!7.32e-21!182;CL:0000738!5.71e-19!140;CL:0002087!2.85e-16!119;CL:0002031!7.50e-16!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.10e-20;33!CL:0002057;2.10e-20;33!CL:0000473;7.97e-18;39!CL:0000234;7.97e-18;39!CL:0000576;9.29e-17;48!CL:0000766;1.85e-14;69!CL:0000763;1.54e-11;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.36e-32,72;CL:0000763,8.38e-31,108;CL:0000049,8.38e-31,108;CL:0000473,5.91e-27,48;CL:0000234,5.91e-27,48;CL:0002194,7.66e-27,59;CL:0000576,7.66e-27,59;CL:0000040,7.66e-27,59;CL:0000559,7.66e-27,59;CL:0000839,1.35e-26,66;CL:0000860,3.55e-26,42;CL:0002057,3.55e-26,42;CL:0000557,5.70e-26,67;CL:0000037,1.67e-25,168;CL:0002009,2.76e-25,61;CL:0002032,2.44e-23,161;CL:0000837,2.44e-23,161;CL:0000988,1.09e-22,177;CL:0000738,2.38e-20,136;CL:0002087,1.10e-17,115;CL:0002031,3.58e-17,120 | |||
|ontology_enrichment_development_v019=CL:0002057;2.34e-19;42!CL:0000049;5.86e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.44e-25!102;UBERON:0003061!1.44e-25!102;UBERON:0001474!1.50e-22!86;UBERON:0002193!2.91e-22!112;UBERON:0002371!3.19e-21!80;UBERON:0004765!1.39e-18!101;UBERON:0001434!1.39e-18!101;UBERON:0002405!4.64e-12!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.02e-27,98;UBERON:0003061,1.02e-27,98;UBERON:0001474,8.86e-25,82;UBERON:0002193,4.80e-24,108;UBERON:0002371,1.80e-23,76;UBERON:0002405,6.76e-20,93;UBERON:0004765,6.71e-19,90;UBERON:0001434,3.15e-18,100 | |||
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| ||
|short_description=p2@E2F3 | |||
}} | }} |
Latest revision as of 03:06, 17 September 2015
Short description: | p2@E2F3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_E2F3_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -147bp_to_ENST00000535432, NM_001243076_5end |
EntrezGene: | E2F3 |
HGNC: | 3115 |
UniProt: | Q68DT0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.36e-32 | 72 |
myeloid cell | 8.38e-31 | 108 |
common myeloid progenitor | 8.38e-31 | 108 |
defensive cell | 5.91e-27 | 48 |
phagocyte | 5.91e-27 | 48 |
monopoietic cell | 7.66e-27 | 59 |
monocyte | 7.66e-27 | 59 |
monoblast | 7.66e-27 | 59 |
promonocyte | 7.66e-27 | 59 |
myeloid lineage restricted progenitor cell | 1.35e-26 | 66 |
classical monocyte | 3.55e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.55e-26 | 42 |
granulocyte monocyte progenitor cell | 5.70e-26 | 67 |
hematopoietic stem cell | 1.67e-25 | 168 |
macrophage dendritic cell progenitor | 2.76e-25 | 61 |
hematopoietic oligopotent progenitor cell | 2.44e-23 | 161 |
hematopoietic multipotent progenitor cell | 2.44e-23 | 161 |
hematopoietic cell | 1.09e-22 | 177 |
leukocyte | 2.38e-20 | 136 |
nongranular leukocyte | 1.10e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 3.58e-17 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.02e-27 | 98 |
blood island | 1.02e-27 | 98 |
bone element | 8.86e-25 | 82 |
hemolymphoid system | 4.80e-24 | 108 |
bone marrow | 1.80e-23 | 76 |
immune system | 6.76e-20 | 93 |
skeletal element | 6.71e-19 | 90 |
skeletal system | 3.15e-18 | 100 |