FFCP PHASE1:Hg19::chr6:20402608..20402629,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:20402608..20402629,+ to FFCP PHASE1:Hg19::chr6:20402608..20402629,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1871 | |EntrezGene=1871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3115 | |HGNC=3115 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=144bp_to_BC156367,BC172526_5end | |||
|cluster_id=chr6:20402608..20402629,+ | |||
|description=CAGE_peak_13_at_E2F3_5end | |||
|id=chr6:20402608..20402629,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1001319;7.47e-30;1!CL:1000600;7.47e-30;1!CL:0002262;1.91e-15;2!CL:1000398;1.91e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,7.48e-30,1;CL:1000600,7.48e-30,1;CL:0002262,1.54e-15,2;CL:1000398,1.54e-15,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!8.26e-18!239;DOID:162!8.54e-18!235;DOID:0050687!5.03e-11!143;DOID:305!2.18e-10!106;DOID:2531!1.10e-09!51;DOID:0060083!1.10e-09!51;DOID:0050686!1.17e-08!137;DOID:1240!1.30e-08!39;DOID:8692!1.08e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;7.47e-30;1!UBERON:0001256;7.47e-30;1!UBERON:0001259;7.47e-30;1!UBERON:0005910;6.17e-20;6!UBERON:0001255;1.15e-15;2!UBERON:0001556;1.15e-15;2!UBERON:0001281;1.91e-15;2!UBERON:0003497;1.91e-15;2!UBERON:0003909;1.91e-15;2!UBERON:0003835;1.91e-15;2!UBERON:0001280;9.43e-11;3!UBERON:0004647;9.43e-11;3!UBERON:0000486;1.72e-10;12!UBERON:0000365;4.79e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,7.48e-30,1;UBERON:0001256,7.48e-30,1;UBERON:0001259,7.48e-30,1;UBERON:0005910,7.13e-20,6;UBERON:0001255,1.15e-15,2;UBERON:0001556,1.15e-15,2;UBERON:0001281,1.54e-15,2;UBERON:0003497,1.54e-15,2;UBERON:0003909,1.54e-15,2;UBERON:0003835,1.54e-15,2;UBERON:0001280,8.17e-11,3;UBERON:0004647,8.17e-11,3;UBERON:0005171,8.17e-11,3;UBERON:0000365,4.79e-07,5 | |||
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| ||
|short_description=p13@E2F3 | |||
}} | }} |
Latest revision as of 03:05, 17 September 2015
Short description: | p13@E2F3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_E2F3_5end |
Coexpression cluster: | NA |
Association with transcript: | 144bp_to_BC156367, BC172526_5end |
EntrezGene: | E2F3 |
HGNC: | 3115 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 7.48e-30 | 1 |
lower urinary tract cell | 7.48e-30 | 1 |
endothelial cell of sinusoid | 1.54e-15 | 2 |
endothelial cell of hepatic sinusoid | 1.54e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 7.48e-30 | 1 |
wall of urinary bladder | 7.48e-30 | 1 |
mucosa of urinary bladder | 7.48e-30 | 1 |
transitional epithelium | 7.13e-20 | 6 |
urinary bladder | 1.15e-15 | 2 |
lower urinary tract | 1.15e-15 | 2 |
hepatic sinusoid | 1.54e-15 | 2 |
abdomen blood vessel | 1.54e-15 | 2 |
sinusoid | 1.54e-15 | 2 |
abdominal segment blood vessel | 1.54e-15 | 2 |
liver parenchyma | 8.17e-11 | 3 |
liver lobule | 8.17e-11 | 3 |
hepatic duct | 8.17e-11 | 3 |
urothelium | 4.79e-07 | 5 |