FFCP PHASE1:Hg19::chr3:18466660..18466676,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:18466660..18466676,- to FFCP PHASE1:Hg19::chr3:18466660..18466676,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6304 | |EntrezGene=6304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10541 | |HGNC=10541 | ||
|TSSclassifier=strong | |||
|UniProt=Q01826 | |UniProt=Q01826 | ||
|association_with_transcript=152bp_to_ENST00000338745,NM_001195470,NM_002971,uc003cbh.2,uc003cbi.2_5end | |||
|cluster_id=chr3:18466660..18466676,- | |||
|description=CAGE_peak_5_at_SATB1_5end | |||
|id=chr3:18466660..18466676,- | |||
|ontology_enrichment_celltype=CL:0000037!2.06e-33!172;CL:0000566!2.06e-33!172;CL:0000738!9.23e-33!140;CL:0000988!1.31e-30!182;CL:0002032!4.90e-30!165;CL:0000837!4.90e-30!165;CL:0002087!6.68e-26!119;CL:0002031!6.99e-26!124;CL:0002057!4.99e-22!42;CL:0000766!4.75e-21!76;CL:0000763!2.93e-20!112;CL:0000049!2.93e-20!112;CL:0000860!6.36e-19!45;CL:0000557!1.22e-17!71;CL:0002009!2.86e-16!65;CL:0000839!8.65e-16!70;CL:0002194!1.22e-15!63;CL:0000576!1.22e-15!63;CL:0000040!1.22e-15!63;CL:0000559!1.22e-15!63;CL:0000791!2.44e-10!18;CL:0000789!2.44e-10!18;CL:0002420!2.44e-10!18;CL:0002419!2.44e-10!18;CL:0000790!2.44e-10!18;CL:0000838!1.21e-09!52;CL:0000542!3.92e-09!53;CL:0000051!3.92e-09!53;CL:0000084!1.39e-08!25;CL:0000827!1.39e-08!25;CL:0000625!4.08e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.32e-23;33!CL:0002057;1.32e-23;33!CL:0000576;2.52e-17;48!CL:0000473;3.04e-15;39!CL:0000234;3.04e-15;39!CL:0000791;3.36e-14;18!CL:0000789;3.36e-14;18!CL:0002419;3.36e-14;18!CL:0000766;2.03e-13;69!CL:0002087;5.93e-12;104!CL:0000084;9.35e-11;25!CL:0000094;9.50e-10;8!CL:0000625;7.12e-09;11!CL:0000738;1.45e-08;136!CL:0000763;4.63e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.71e-40,136;CL:0000037,1.26e-35,168;CL:0000988,4.03e-32,177;CL:0002087,7.01e-32,115;CL:0002032,5.43e-31,161;CL:0000837,5.43e-31,161;CL:0002031,1.42e-29,120;CL:0000860,1.65e-29,42;CL:0002057,1.65e-29,42;CL:0000766,8.98e-26,72;CL:0000473,5.50e-24,48;CL:0000234,5.50e-24,48;CL:0000557,9.58e-21,67;CL:0002009,1.02e-20,61;CL:0000763,6.14e-20,108;CL:0000049,6.14e-20,108;CL:0002194,9.57e-20,59;CL:0000576,9.57e-20,59;CL:0000040,9.57e-20,59;CL:0000559,9.57e-20,59;CL:0000839,4.86e-18,66;CL:0000791,3.66e-14,18;CL:0000789,3.66e-14,18;CL:0002420,3.66e-14,18;CL:0002419,3.66e-14,18;CL:0000790,3.66e-14,18;CL:0000084,8.73e-11,25;CL:0000827,8.73e-11,25;CL:0000838,1.06e-10,52;CL:0000542,2.54e-10,53;CL:0000051,2.54e-10,53;CL:0000094,1.35e-09,8;CL:0000625,4.80e-09,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.01e-21;42!CL:0000790;3.36e-14;18!CL:0000049;8.93e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.06e-21!102;UBERON:0003061!1.06e-21!102;UBERON:0007023!1.98e-21!115;UBERON:0002193!6.71e-19!112;UBERON:0002371!3.97e-15!80;UBERON:0001474!1.04e-13!86;UBERON:0002405!6.79e-12!115;UBERON:0002780!3.23e-11!41;UBERON:0001890!3.23e-11!41;UBERON:0006240!3.23e-11!41;UBERON:0001950!5.60e-11!20;UBERON:0004765!8.55e-11!101;UBERON:0001434!8.55e-11!101;UBERON:0001049!9.00e-11!57;UBERON:0005068!9.00e-11!57;UBERON:0006241!9.00e-11!57;UBERON:0007135!9.00e-11!57;UBERON:0003080!1.46e-10!42;UBERON:0002619!1.80e-10!22;UBERON:0002020!9.99e-10!34;UBERON:0003528!9.99e-10!34;UBERON:0001893!1.40e-09!34;UBERON:0001869!2.13e-09!32;UBERON:0002791!4.29e-09!33;UBERON:0000956!4.60e-09!25;UBERON:0000203!4.60e-09!25;UBERON:0002616!5.06e-08!59;UBERON:0001017!2.73e-07!82;UBERON:0005743!7.40e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.20e-15;20!UBERON:0002619;2.13e-15;22!UBERON:0000956;8.45e-13;25!UBERON:0000203;8.45e-13;25!UBERON:0001869;8.15e-12;32!UBERON:0003528;2.87e-11;34!UBERON:0002020;2.87e-11;34!UBERON:0001893;3.88e-11;34!UBERON:0002791;1.06e-10;32!UBERON:0002780;5.07e-09;41!UBERON:0001890;5.07e-09;41!UBERON:0000200;1.32e-07;6 | |||
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| ||
|short_description=p5@SATB1 | |||
}} | }} |
Latest revision as of 03:04, 17 September 2015
Short description: | p5@SATB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SATB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 152bp_to_ENST00000338745, NM_001195470, NM_002971, uc003cbh.2, uc003cbi.2_5end |
EntrezGene: | SATB1 |
HGNC: | 10541 |
UniProt: | Q01826 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.17e-27 | 98 |
blood island | 8.17e-27 | 98 |
hemolymphoid system | 3.74e-23 | 108 |
bone marrow | 3.68e-18 | 76 |
immune system | 8.63e-18 | 93 |
neocortex | 7.17e-16 | 20 |
bone element | 1.05e-15 | 82 |
regional part of cerebral cortex | 1.26e-15 | 22 |
cerebral hemisphere | 1.25e-13 | 32 |
brain grey matter | 2.94e-13 | 34 |
gray matter | 2.94e-13 | 34 |
cerebral cortex | 5.37e-13 | 25 |
pallium | 5.37e-13 | 25 |
skeletal element | 5.40e-13 | 90 |
adult organism | 7.69e-13 | 114 |
regional part of forebrain | 1.27e-12 | 41 |
forebrain | 1.27e-12 | 41 |
anterior neural tube | 1.27e-12 | 41 |
future forebrain | 1.27e-12 | 41 |
telencephalon | 2.23e-12 | 34 |
regional part of telencephalon | 3.13e-12 | 32 |
skeletal system | 4.08e-11 | 100 |
neural tube | 1.83e-10 | 56 |
neural rod | 1.83e-10 | 56 |
future spinal cord | 1.83e-10 | 56 |
neural keel | 1.83e-10 | 56 |
regional part of nervous system | 5.04e-10 | 53 |
regional part of brain | 5.04e-10 | 53 |
gyrus | 1.03e-07 | 6 |
brain | 4.83e-07 | 68 |
future brain | 4.83e-07 | 68 |