FFCP PHASE1:Hg19::chr3:18465197..18465206,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6304 | |EntrezGene=6304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10541 | |HGNC=10541 | ||
|TSSclassifier=strong | |||
|UniProt=Q01826 | |UniProt=Q01826 | ||
|association_with_transcript=99bp_to_M97287_5end | |association_with_transcript=99bp_to_M97287_5end | ||
|cluster_id=chr3:18465197..18465206,- | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_38_at_SATB1_5end | |description=CAGE_peak_38_at_SATB1_5end | ||
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|ontology_enrichment_celltype=CL:0000791!5.12e-18!18;CL:0000789!5.12e-18!18;CL:0002420!5.12e-18!18;CL:0002419!5.12e-18!18;CL:0000790!5.12e-18!18;CL:0000084!2.83e-14!25;CL:0000827!2.83e-14!25;CL:0000625!1.12e-13!11;CL:0000738!9.31e-11!140;CL:0000838!1.04e-09!52;CL:0000542!1.91e-09!53;CL:0000051!1.91e-09!53;CL:0002087!2.87e-09!119;CL:0000842!2.95e-08!3;CL:0000037!7.51e-08!172;CL:0000566!7.51e-08!172;CL:0002031!9.11e-08!124;CL:0000988!1.43e-07!182;CL:0000624!3.24e-07!6 | |ontology_enrichment_celltype=CL:0000791!5.12e-18!18;CL:0000789!5.12e-18!18;CL:0002420!5.12e-18!18;CL:0002419!5.12e-18!18;CL:0000790!5.12e-18!18;CL:0000084!2.83e-14!25;CL:0000827!2.83e-14!25;CL:0000625!1.12e-13!11;CL:0000738!9.31e-11!140;CL:0000838!1.04e-09!52;CL:0000542!1.91e-09!53;CL:0000051!1.91e-09!53;CL:0002087!2.87e-09!119;CL:0000842!2.95e-08!3;CL:0000037!7.51e-08!172;CL:0000566!7.51e-08!172;CL:0002031!9.11e-08!124;CL:0000988!1.43e-07!182;CL:0000624!3.24e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;6.52e-23;18!CL:0000789;6.52e-23;18!CL:0002419;6.52e-23;18!CL:0000084;1.54e-16;25!CL:0000625;4.52e-14;11!CL:0000624;4.81e-12;6!CL:0000815;1.51e-09;2!CL:0000792;1.51e-09;2!CL:0002677;1.51e-09;2!CL:0000226;8.86e-07;3!CL:0000898;8.86e-07;3!CL:0000842;8.86e-07;3 | |ontology_enrichment_celltype_v019=CL:0000791;6.52e-23;18!CL:0000789;6.52e-23;18!CL:0002419;6.52e-23;18!CL:0000084;1.54e-16;25!CL:0000625;4.52e-14;11!CL:0000624;4.81e-12;6!CL:0000815;1.51e-09;2!CL:0000792;1.51e-09;2!CL:0002677;1.51e-09;2!CL:0000226;8.86e-07;3!CL:0000898;8.86e-07;3!CL:0000842;8.86e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.38e-23,18;CL:0000789,6.38e-23,18;CL:0002420,6.38e-23,18;CL:0002419,6.38e-23,18;CL:0000790,6.38e-23,18;CL:0000084,1.51e-16,25;CL:0000827,1.51e-16,25;CL:0000625,5.05e-14,11;CL:0000624,4.07e-12,6;CL:0000815,1.12e-09,2;CL:0000792,1.12e-09,2;CL:0002677,1.12e-09,2;CL:0000838,5.60e-08,52;CL:0000542,7.92e-08,53;CL:0000051,7.92e-08,53;CL:0000898,7.28e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;6.52e-23;18 | |ontology_enrichment_development_v019=CL:0000790;6.52e-23;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!8.99e-12!22;UBERON:0001950!5.83e-11!20;UBERON:0001869!4.09e-10!32;UBERON:0000956!4.25e-10!25;UBERON:0000203!4.25e-10!25;UBERON:0000200!1.66e-09!6;UBERON:0001893!2.37e-09!34;UBERON:0002780!1.73e-08!41;UBERON:0001890!1.73e-08!41;UBERON:0006240!1.73e-08!41;UBERON:0002791!2.38e-08!33;UBERON:0003080!3.27e-08!42;UBERON:0002020!4.98e-08!34;UBERON:0003528!4.98e-08!34;UBERON:0007023!8.17e-08!115;UBERON:0001871!3.92e-07!7 | |ontology_enrichment_uberon=UBERON:0002619!8.99e-12!22;UBERON:0001950!5.83e-11!20;UBERON:0001869!4.09e-10!32;UBERON:0000956!4.25e-10!25;UBERON:0000203!4.25e-10!25;UBERON:0000200!1.66e-09!6;UBERON:0001893!2.37e-09!34;UBERON:0002780!1.73e-08!41;UBERON:0001890!1.73e-08!41;UBERON:0006240!1.73e-08!41;UBERON:0002791!2.38e-08!33;UBERON:0003080!3.27e-08!42;UBERON:0002020!4.98e-08!34;UBERON:0003528!4.98e-08!34;UBERON:0007023!8.17e-08!115;UBERON:0001871!3.92e-07!7 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p38@SATB1 | |short_description=p38@SATB1 | ||
}} | }} |
Latest revision as of 03:01, 17 September 2015
Short description: | p38@SATB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_38_at_SATB1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 99bp_to_M97287_5end |
EntrezGene: | SATB1 |
HGNC: | 10541 |
UniProt: | Q01826 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.38e-23 | 18 |
alpha-beta T cell | 6.38e-23 | 18 |
immature T cell | 6.38e-23 | 18 |
mature T cell | 6.38e-23 | 18 |
immature alpha-beta T cell | 6.38e-23 | 18 |
T cell | 1.51e-16 | 25 |
pro-T cell | 1.51e-16 | 25 |
CD8-positive, alpha-beta T cell | 5.05e-14 | 11 |
CD4-positive, alpha-beta T cell | 4.07e-12 | 6 |
regulatory T cell | 1.12e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.12e-09 | 2 |
naive regulatory T cell | 1.12e-09 | 2 |
lymphoid lineage restricted progenitor cell | 5.60e-08 | 52 |
lymphocyte | 7.92e-08 | 53 |
common lymphoid progenitor | 7.92e-08 | 53 |
naive T cell | 7.28e-07 | 3 |