FFCP PHASE1:Hg19::chr17:6918064..6918087,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=124944 | |EntrezGene=124944 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28737 | |HGNC=28737 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IXM2,E9PB29,F8W038 | |UniProt=Q8IXM2,E9PB29,F8W038 | ||
|association_with_transcript=0bp_to_ENST00000293804,ENST00000455303,ENST00000546760,ENST00000549857,ENST00000552402_5end | |association_with_transcript=0bp_to_ENST00000293804,ENST00000455303,ENST00000546760,ENST00000549857,ENST00000552402_5end | ||
|cluster_id=chr17:6918064..6918087,+ | |||
|description=CAGE_peak_4_at_C17orf49_5end | |description=CAGE_peak_4_at_C17orf49_5end | ||
|id=chr17:6918064..6918087,+ | |id=chr17:6918064..6918087,+ | ||
|ontology_enrichment_celltype=CL:0000144!1.53e-12!625;CL:0000003!2.05e-12!722;CL:0000012!2.68e-11!682;CL:0002371!5.85e-11!591;CL:0000738!7.36e-11!140;CL:0000988!2.25e-10!182;CL:0000548!3.39e-10!679;CL:0000004!3.39e-10!679;CL:0000255!3.39e-10!679;CL:0000037!3.30e-09!172;CL:0000566!3.30e-09!172;CL:0000838!6.38e-09!52;CL:0000542!1.33e-08!53;CL:0000051!1.33e-08!53;CL:0002032!3.13e-08!165;CL:0000837!3.13e-08!165;CL:0000034!5.40e-08!444;CL:0000945!1.48e-07!24;CL:0000826!1.48e-07!24;CL:1000449!3.45e-07!16;CL:0002031!4.03e-07!124 | |ontology_enrichment_celltype=CL:0000144!1.53e-12!625;CL:0000003!2.05e-12!722;CL:0000012!2.68e-11!682;CL:0002371!5.85e-11!591;CL:0000738!7.36e-11!140;CL:0000988!2.25e-10!182;CL:0000548!3.39e-10!679;CL:0000004!3.39e-10!679;CL:0000255!3.39e-10!679;CL:0000037!3.30e-09!172;CL:0000566!3.30e-09!172;CL:0000838!6.38e-09!52;CL:0000542!1.33e-08!53;CL:0000051!1.33e-08!53;CL:0002032!3.13e-08!165;CL:0000837!3.13e-08!165;CL:0000034!5.40e-08!444;CL:0000945!1.48e-07!24;CL:0000826!1.48e-07!24;CL:1000449!3.45e-07!16;CL:0002031!4.03e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.89e-07;15!CL:0000945;1.99e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.10e-11,136;CL:0000988,7.82e-11,177;CL:0000037,1.29e-09,168;CL:0000838,6.38e-09,52;CL:0002032,1.29e-08,161;CL:0000837,1.29e-08,161;CL:0000542,1.33e-08,53;CL:0000051,1.33e-08,53;CL:0000034,4.96e-08,441;CL:1000449,1.43e-07,15;CL:0000945,1.48e-07,24;CL:0000826,1.48e-07,24;CL:0002031,1.52e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004211!3.45e-07!16;UBERON:0001285!3.45e-07!16;UBERON:0007684!3.45e-07!16;UBERON:0003220!3.45e-07!16;UBERON:0004208!3.45e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.89e-07;15!UBERON:0004819;1.89e-07;15!UBERON:0001285;1.89e-07;15!UBERON:0007684;1.89e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,1.43e-07,15;UBERON:0009773,1.43e-07,15;UBERON:0001231,1.43e-07,15;UBERON:0001285,1.43e-07,15;UBERON:0007684,1.43e-07,15;UBERON:0004208,1.43e-07,15;UBERON:0006555,7.44e-07,16;UBERON:0004819,7.44e-07,16 | |||
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| ||
|short_description=p4@C17orf49 | |short_description=p4@C17orf49 | ||
}} | }} |
Latest revision as of 02:54, 17 September 2015
Short description: | p4@C17orf49 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C17orf49_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000293804, ENST00000455303, ENST00000546760, ENST00000549857, ENST00000552402_5end |
EntrezGene: | C17orf49 |
HGNC: | 28737 |
UniProt: | Q8IXM2E9PB29F8W038 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.10e-11 | 136 |
hematopoietic cell | 7.82e-11 | 177 |
hematopoietic stem cell | 1.29e-09 | 168 |
lymphoid lineage restricted progenitor cell | 6.38e-09 | 52 |
hematopoietic oligopotent progenitor cell | 1.29e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.29e-08 | 161 |
lymphocyte | 1.33e-08 | 53 |
common lymphoid progenitor | 1.33e-08 | 53 |
stem cell | 4.96e-08 | 441 |
epithelial cell of nephron | 1.43e-07 | 15 |
lymphocyte of B lineage | 1.48e-07 | 24 |
pro-B cell | 1.48e-07 | 24 |
hematopoietic lineage restricted progenitor cell | 1.52e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 1.43e-07 | 15 |
renal tubule | 1.43e-07 | 15 |
nephron tubule | 1.43e-07 | 15 |
nephron | 1.43e-07 | 15 |
uriniferous tubule | 1.43e-07 | 15 |
nephrogenic mesenchyme | 1.43e-07 | 15 |
excretory tube | 7.44e-07 | 16 |
kidney epithelium | 7.44e-07 | 16 |