FFCP PHASE1:Hg19::chr1:152006179..152006217,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:152006179..152006217,-
|short_description=p3@S100A11
|description=CAGE_peak_3_at_S100A11_5end
|association_with_transcript=59bp_to_AB464185,BT009912,DQ8917...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6282 | |EntrezGene=6282 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10488 | |HGNC=10488 | ||
|TSSclassifier=strong | |||
|UniProt=P31949 | |UniProt=P31949 | ||
|association_with_transcript=59bp_to_AB464185,BT009912,DQ891746,DQ894925_5end | |||
|cluster_id=chr1:152006179..152006217,- | |||
|description=CAGE_peak_3_at_S100A11_5end | |||
|id=chr1:152006179..152006217,- | |||
|ontology_enrichment_celltype=CL:0000548!1.43e-20!679;CL:0000004!1.43e-20!679;CL:0000255!1.43e-20!679;CL:0000012!3.07e-19!682;CL:0000860!1.58e-15!45;CL:0000063!2.16e-15!578;CL:0002194!2.19e-15!63;CL:0000576!2.19e-15!63;CL:0000040!2.19e-15!63;CL:0000559!2.19e-15!63;CL:0002057!3.57e-15!42;CL:0002371!4.83e-15!591;CL:0002009!7.64e-15!65;CL:0000766!1.24e-14!76;CL:0000144!3.32e-14!625;CL:0000003!3.50e-13!722;CL:0000557!2.67e-12!71;CL:0000839!4.56e-12!70;CL:0000066!3.82e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.09e-17;33!CL:0002057;2.09e-17;33!CL:0000473;2.28e-16;39!CL:0000234;2.28e-16;39!CL:0000576;6.29e-09;48!CL:0000766;2.88e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.32e-18,48;CL:0000234,8.32e-18,48;CL:0002194,1.86e-15,59;CL:0000576,1.86e-15,59;CL:0000040,1.86e-15,59;CL:0000559,1.86e-15,59;CL:0000860,1.88e-15,42;CL:0002057,1.88e-15,42;CL:0002009,7.00e-15,61;CL:0000766,1.33e-14,72;CL:0000557,2.54e-12,67;CL:0000839,4.36e-12,66;CL:0000066,1.12e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002057;1.21e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!9.12e-19!448;UBERON:0004120!9.12e-19!448;UBERON:0006603!9.12e-19!448;UBERON:0002204!8.79e-15!167;UBERON:0003081!1.01e-13!216;UBERON:0002371!4.19e-12!80;UBERON:0001474!3.66e-11!86;UBERON:0004765!4.54e-11!101;UBERON:0001434!4.54e-11!101;UBERON:0002390!4.20e-08!102;UBERON:0003061!4.20e-08!102;UBERON:0000467!1.87e-07!625;UBERON:0000480!2.01e-07!626;UBERON:0000468!2.18e-07!659;UBERON:0002193!2.74e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.71e-15,315;UBERON:0004120,2.71e-15,315;UBERON:0006603,2.71e-15,315;UBERON:0002204,1.01e-14,167;UBERON:0003081,3.13e-12,203;UBERON:0002371,3.56e-12,76;UBERON:0004765,2.02e-11,90;UBERON:0001474,3.24e-11,82;UBERON:0001434,1.02e-10,100;UBERON:0002405,2.19e-08,93;UBERON:0002390,8.32e-08,98;UBERON:0003061,8.32e-08,98;UBERON:0002193,5.90e-07,108 | |||
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| ||
|short_description=p3@S100A11 | |||
}} | }} |
Latest revision as of 02:42, 17 September 2015
Short description: | p3@S100A11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_S100A11_5end |
Coexpression cluster: | NA |
Association with transcript: | 59bp_to_AB464185, BT009912, DQ891746, DQ894925_5end |
EntrezGene: | S100A11 |
HGNC: | 10488 |
UniProt: | P31949 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.32e-18 | 48 |
phagocyte | 8.32e-18 | 48 |
monopoietic cell | 1.86e-15 | 59 |
monocyte | 1.86e-15 | 59 |
monoblast | 1.86e-15 | 59 |
promonocyte | 1.86e-15 | 59 |
classical monocyte | 1.88e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.88e-15 | 42 |
macrophage dendritic cell progenitor | 7.00e-15 | 61 |
myeloid leukocyte | 1.33e-14 | 72 |
granulocyte monocyte progenitor cell | 2.54e-12 | 67 |
myeloid lineage restricted progenitor cell | 4.36e-12 | 66 |
epithelial cell | 1.12e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 2.71e-15 | 315 |
mesoderm-derived structure | 2.71e-15 | 315 |
presumptive mesoderm | 2.71e-15 | 315 |
musculoskeletal system | 1.01e-14 | 167 |
lateral plate mesoderm | 3.13e-12 | 203 |
bone marrow | 3.56e-12 | 76 |
skeletal element | 2.02e-11 | 90 |
bone element | 3.24e-11 | 82 |
skeletal system | 1.02e-10 | 100 |
immune system | 2.19e-08 | 93 |
hematopoietic system | 8.32e-08 | 98 |
blood island | 8.32e-08 | 98 |
hemolymphoid system | 5.90e-07 | 108 |