FFCP PHASE1:Hg19::chr1:25256439..25256476,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=864 | |EntrezGene=864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10473 | |HGNC=10473 | ||
|TSSclassifier=strong | |||
|UniProt=Q13761 | |UniProt=Q13761 | ||
|association_with_transcript=-71bp_to_ENST00000308873_5end | |association_with_transcript=-71bp_to_ENST00000308873_5end | ||
|cluster_id=chr1:25256439..25256476,- | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_3_at_RUNX3_5end | |description=CAGE_peak_3_at_RUNX3_5end | ||
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|ontology_enrichment_celltype=CL:0000738!2.34e-66!140;CL:0000037!4.76e-64!172;CL:0000566!4.76e-64!172;CL:0000988!6.68e-63!182;CL:0002032!8.90e-61!165;CL:0000837!8.90e-61!165;CL:0002031!2.20e-53!124;CL:0002087!2.49e-53!119;CL:0000766!1.26e-42!76;CL:0000763!5.18e-41!112;CL:0000049!5.18e-41!112;CL:0000557!8.24e-39!71;CL:0002009!2.06e-35!65;CL:0000839!1.64e-34!70;CL:0002194!6.83e-34!63;CL:0000576!6.83e-34!63;CL:0000040!6.83e-34!63;CL:0000559!6.83e-34!63;CL:0002057!2.32e-32!42;CL:0000860!1.50e-28!45;CL:0000542!1.17e-16!53;CL:0000051!1.17e-16!53;CL:0000838!2.32e-16!52;CL:0000134!1.51e-14!358;CL:0002320!1.59e-14!365;CL:0000219!5.87e-13!390;CL:0002393!2.31e-08!9;CL:0002397!2.31e-08!9;CL:0000945!3.50e-08!24;CL:0000826!3.50e-08!24;CL:0000081!7.18e-08!11;CL:0000084!9.07e-08!25;CL:0000827!9.07e-08!25;CL:0000791!2.19e-07!18;CL:0000789!2.19e-07!18;CL:0002420!2.19e-07!18;CL:0002419!2.19e-07!18;CL:0000790!2.19e-07!18;CL:0000094!2.81e-07!8;CL:0000451!3.58e-07!10 | |ontology_enrichment_celltype=CL:0000738!2.34e-66!140;CL:0000037!4.76e-64!172;CL:0000566!4.76e-64!172;CL:0000988!6.68e-63!182;CL:0002032!8.90e-61!165;CL:0000837!8.90e-61!165;CL:0002031!2.20e-53!124;CL:0002087!2.49e-53!119;CL:0000766!1.26e-42!76;CL:0000763!5.18e-41!112;CL:0000049!5.18e-41!112;CL:0000557!8.24e-39!71;CL:0002009!2.06e-35!65;CL:0000839!1.64e-34!70;CL:0002194!6.83e-34!63;CL:0000576!6.83e-34!63;CL:0000040!6.83e-34!63;CL:0000559!6.83e-34!63;CL:0002057!2.32e-32!42;CL:0000860!1.50e-28!45;CL:0000542!1.17e-16!53;CL:0000051!1.17e-16!53;CL:0000838!2.32e-16!52;CL:0000134!1.51e-14!358;CL:0002320!1.59e-14!365;CL:0000219!5.87e-13!390;CL:0002393!2.31e-08!9;CL:0002397!2.31e-08!9;CL:0000945!3.50e-08!24;CL:0000826!3.50e-08!24;CL:0000081!7.18e-08!11;CL:0000084!9.07e-08!25;CL:0000827!9.07e-08!25;CL:0000791!2.19e-07!18;CL:0000789!2.19e-07!18;CL:0002420!2.19e-07!18;CL:0002419!2.19e-07!18;CL:0000790!2.19e-07!18;CL:0000094!2.81e-07!8;CL:0000451!3.58e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.19e-34;33!CL:0002057;1.19e-34;33!CL:0000576;1.46e-32;48!CL:0000473;3.09e-30;39!CL:0000234;3.09e-30;39!CL:0000766;4.10e-27;69!CL:0002087;7.36e-22;104!CL:0000738;1.28e-19;136!CL:0000763;5.89e-17;100!CL:0000988;4.17e-15;177!CL:0000542;1.08e-10;53!CL:0000945;1.45e-10;24!CL:0000094;3.03e-10;8!CL:0000451;6.61e-10;10!CL:0000081;8.25e-10;11!CL:0000990;1.32e-08;8!CL:0000219;1.44e-08;193!CL:0002393;1.76e-08;6!CL:0002397;1.76e-08;6!CL:0000840;5.87e-07;5!CL:0000084;8.16e-07;25!CL:0000791;8.95e-07;18!CL:0000789;8.95e-07;18!CL:0002419;8.95e-07;18 | |ontology_enrichment_celltype_v019=CL:0000860;1.19e-34;33!CL:0002057;1.19e-34;33!CL:0000576;1.46e-32;48!CL:0000473;3.09e-30;39!CL:0000234;3.09e-30;39!CL:0000766;4.10e-27;69!CL:0002087;7.36e-22;104!CL:0000738;1.28e-19;136!CL:0000763;5.89e-17;100!CL:0000988;4.17e-15;177!CL:0000542;1.08e-10;53!CL:0000945;1.45e-10;24!CL:0000094;3.03e-10;8!CL:0000451;6.61e-10;10!CL:0000081;8.25e-10;11!CL:0000990;1.32e-08;8!CL:0000219;1.44e-08;193!CL:0002393;1.76e-08;6!CL:0002397;1.76e-08;6!CL:0000840;5.87e-07;5!CL:0000084;8.16e-07;25!CL:0000791;8.95e-07;18!CL:0000789;8.95e-07;18!CL:0002419;8.95e-07;18 | ||
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|ontology_enrichment_development_v019=CL:0002057;3.94e-35;42!CL:0000049;3.30e-16;108!CL:0000051;1.08e-10;53!CL:0000790;8.95e-07;18 | |ontology_enrichment_development_v019=CL:0002057;3.94e-35;42!CL:0000049;3.30e-16;108!CL:0000051;1.08e-10;53!CL:0000790;8.95e-07;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.97e-45!102;UBERON:0003061!2.97e-45!102;UBERON:0002193!1.10e-39!112;UBERON:0002371!4.43e-34!80;UBERON:0001474!2.91e-31!86;UBERON:0004765!1.21e-28!101;UBERON:0001434!1.21e-28!101;UBERON:0002405!6.67e-22!115;UBERON:0002384!5.27e-14!375;UBERON:0000178!1.12e-08!15;UBERON:0000179!1.12e-08!15;UBERON:0000463!1.12e-08!15;UBERON:0003081!7.36e-07!216 | |ontology_enrichment_uberon=UBERON:0002390!2.97e-45!102;UBERON:0003061!2.97e-45!102;UBERON:0002193!1.10e-39!112;UBERON:0002371!4.43e-34!80;UBERON:0001474!2.91e-31!86;UBERON:0004765!1.21e-28!101;UBERON:0001434!1.21e-28!101;UBERON:0002405!6.67e-22!115;UBERON:0002384!5.27e-14!375;UBERON:0000178!1.12e-08!15;UBERON:0000179!1.12e-08!15;UBERON:0000463!1.12e-08!15;UBERON:0003081!7.36e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.04e-11;15!UBERON:0000179;3.04e-11;15!UBERON:0000463;3.04e-11;15!UBERON:0002390;3.14e-08;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;3.04e-11;15!UBERON:0000179;3.04e-11;15!UBERON:0000463;3.04e-11;15!UBERON:0002390;3.14e-08;32 | ||
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| ||
|short_description=p3@RUNX3 | |short_description=p3@RUNX3 | ||
}} | }} |
Latest revision as of 02:38, 17 September 2015
Short description: | p3@RUNX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RUNX3_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -71bp_to_ENST00000308873_5end |
EntrezGene: | RUNX3 |
HGNC: | 10473 |
UniProt: | Q13761 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.54e-66 | 98 |
blood island | 1.54e-66 | 98 |
hemolymphoid system | 7.54e-61 | 108 |
bone marrow | 3.83e-53 | 76 |
immune system | 8.71e-50 | 93 |
bone element | 3.07e-49 | 82 |
skeletal element | 4.96e-44 | 90 |
skeletal system | 1.35e-39 | 100 |
connective tissue | 5.23e-26 | 371 |
lateral plate mesoderm | 3.26e-19 | 203 |
musculoskeletal system | 1.82e-14 | 167 |
blood | 4.21e-11 | 15 |
haemolymphatic fluid | 4.21e-11 | 15 |
organism substance | 4.21e-11 | 15 |