FFCP PHASE1:Hg19::chr15:29561954..29561976,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:29561954..29561976,-
|short_description=p2@NDNL2
|description=CAGE_peak_2_at_NDNL2_5end
|association_with_transcript=40bp_to_uc001zco.2_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56160 | |EntrezGene=56160 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7677 | |HGNC=7677 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=40bp_to_uc001zco.2_5end | |||
|cluster_id=chr15:29561954..29561976,- | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_2_at_NDNL2_5end | |||
|id=chr15:29561954..29561976,- | |||
|ontology_enrichment_celltype=CL:0000838!7.16e-20!52;CL:0000542!1.00e-19!53;CL:0000051!1.00e-19!53;CL:0000791!4.21e-11!18;CL:0000789!4.21e-11!18;CL:0002420!4.21e-11!18;CL:0002419!4.21e-11!18;CL:0000790!4.21e-11!18;CL:0000084!4.02e-10!25;CL:0000827!4.02e-10!25;CL:0000738!1.45e-09!140;CL:0000945!3.39e-09!24;CL:0000826!3.39e-09!24;CL:0000625!1.21e-07!11;CL:0000236!1.44e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.05e-11;18!CL:0000789;3.05e-11;18!CL:0002419;3.05e-11;18!CL:0000542;3.87e-11;53!CL:0000084;3.77e-10;25!CL:0000945;2.14e-09;24!CL:0000625;9.68e-08;11!CL:0000236;4.22e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.23e-20,52;CL:0000542,1.01e-19,53;CL:0000051,1.01e-19,53;CL:0000791,4.21e-11,18;CL:0000789,4.21e-11,18;CL:0002420,4.21e-11,18;CL:0002419,4.21e-11,18;CL:0000790,4.21e-11,18;CL:0000738,1.87e-10,136;CL:0000084,4.06e-10,25;CL:0000827,4.06e-10,25;CL:0000945,3.39e-09,24;CL:0000826,3.39e-09,24;CL:0000625,1.21e-07,11;CL:0000236,1.44e-07,14;CL:0002087,5.26e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000790;3.05e-11;18!CL:0000051;3.87e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@NDNL2 | |||
}} | }} |
Latest revision as of 02:33, 17 September 2015
Short description: | p2@NDNL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NDNL2_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | 40bp_to_uc001zco.2_5end |
EntrezGene: | NDNL2 |
HGNC: | 7677 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 7.23e-20 | 52 |
lymphocyte | 1.01e-19 | 53 |
common lymphoid progenitor | 1.01e-19 | 53 |
mature alpha-beta T cell | 4.21e-11 | 18 |
alpha-beta T cell | 4.21e-11 | 18 |
immature T cell | 4.21e-11 | 18 |
mature T cell | 4.21e-11 | 18 |
immature alpha-beta T cell | 4.21e-11 | 18 |
leukocyte | 1.87e-10 | 136 |
T cell | 4.06e-10 | 25 |
pro-T cell | 4.06e-10 | 25 |
lymphocyte of B lineage | 3.39e-09 | 24 |
pro-B cell | 3.39e-09 | 24 |
CD8-positive, alpha-beta T cell | 1.21e-07 | 11 |
B cell | 1.44e-07 | 14 |
nongranular leukocyte | 5.26e-07 | 115 |