FFCP PHASE1:Hg19::chr20:52612536..52612547,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8537 | |EntrezGene=8537 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=974 | |HGNC=974 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-68bp_to_ENST00000422805_5end | |association_with_transcript=-68bp_to_ENST00000422805_5end | ||
|cluster_id=chr20:52612536..52612547,- | |||
|coexpression_cluster_id=C163 | |||
|description=CAGE_peak_9_at_BCAS1_5end | |description=CAGE_peak_9_at_BCAS1_5end | ||
|id=chr20:52612536..52612547,- | |id=chr20:52612536..52612547,- | ||
|ontology_enrichment_celltype=CL:0000188!1.15e-09!9 | |ontology_enrichment_celltype=CL:0000188!1.15e-09!9 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.09e-44;3!UBERON:0003057;1.09e-44;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002240;1.09e-44;3!UBERON:0005174;1.09e-44;3!UBERON:0001137;1.09e-44;3!UBERON:0002038;5.97e-34;1!UBERON:0009661;5.97e-34;1!UBERON:0002950;5.97e-34;1!UBERON:0001891;5.97e-34;1!UBERON:0002771;9.86e-18;2!UBERON:0001134;2.72e-09;16!UBERON:0002036;2.72e-09;16!UBERON:0000200;8.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,9.77e-45,3;UBERON:0005174,9.77e-45,3;UBERON:0001137,9.77e-45,3;UBERON:0002038,3.61e-34,1;UBERON:0009661,3.61e-34,1;UBERON:0002950,3.61e-34,1;UBERON:0001891,3.61e-34,1;UBERON:0009616,3.61e-34,1;UBERON:0010286,3.61e-34,1;UBERON:0002771,1.27e-17,2;UBERON:0003076,7.75e-10,15;UBERON:0003057,7.75e-10,15;UBERON:0001049,7.87e-10,56;UBERON:0005068,7.87e-10,56;UBERON:0006241,7.87e-10,56;UBERON:0007135,7.87e-10,56;UBERON:0001017,6.64e-07,81;UBERON:0003075,6.64e-07,82;UBERON:0007284,6.64e-07,82;UBERON:0000200,9.49e-07,6 | |||
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| ||
|short_description=p9@BCAS1 | |short_description=p9@BCAS1 | ||
}} | }} |
Latest revision as of 02:14, 17 September 2015
Short description: | p9@BCAS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_BCAS1_5end |
Coexpression cluster: | C163_Skeletal_skeletal_Pericytes_Hepatic_rhabdomyosarcoma_throat_mesenchymal |
Association with transcript: | -68bp_to_ENST00000422805_5end |
EntrezGene: | BCAS1 |
HGNC: | 974 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spinal cord | 9.77e-45 | 3 |
dorsal region element | 9.77e-45 | 3 |
dorsum | 9.77e-45 | 3 |
substantia nigra | 3.61e-34 | 1 |
midbrain nucleus | 3.61e-34 | 1 |
regional part of midbrain | 3.61e-34 | 1 |
midbrain | 3.61e-34 | 1 |
presumptive midbrain | 3.61e-34 | 1 |
midbrain neural tube | 3.61e-34 | 1 |
middle temporal gyrus | 1.27e-17 | 2 |
posterior neural tube | 7.75e-10 | 15 |
chordal neural plate | 7.75e-10 | 15 |
neural tube | 7.87e-10 | 56 |
neural rod | 7.87e-10 | 56 |
future spinal cord | 7.87e-10 | 56 |
neural keel | 7.87e-10 | 56 |
central nervous system | 6.64e-07 | 81 |
neural plate | 6.64e-07 | 82 |
presumptive neural plate | 6.64e-07 | 82 |
gyrus | 9.49e-07 | 6 |