FFCP PHASE1:Hg19::chr13:31038370..31038509,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3146 | |EntrezGene=3146 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4983 | |HGNC=4983 | ||
|TSSclassifier=strong | |||
|UniProt=P09429,Q5T7C4,Q5T7C6 | |UniProt=P09429,Q5T7C4,Q5T7C6 | ||
|association_with_transcript=0bp_to_ENST00000339872,ENST00000399489,ENST00000426225,uc001usv.2_5end | |association_with_transcript=0bp_to_ENST00000339872,ENST00000399489,ENST00000426225,uc001usv.2_5end | ||
|cluster_id=chr13:31038370..31038509,- | |||
|description=CAGE_peak_3_at_HMGB1_5end | |description=CAGE_peak_3_at_HMGB1_5end | ||
|id=chr13:31038370..31038509,- | |id=chr13:31038370..31038509,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.58e-18!115;UBERON:0000178!1.98e-08!15;UBERON:0000179!1.98e-08!15;UBERON:0000463!1.98e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.40e-08;15!UBERON:0000179;1.40e-08;15!UBERON:0000463;1.40e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.67e-18,114;UBERON:0000178,1.78e-08,15;UBERON:0000179,1.78e-08,15;UBERON:0000463,1.78e-08,15 | |||
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| ||
|short_description=p3@HMGB1 | |short_description=p3@HMGB1 | ||
}} | }} |
Latest revision as of 02:05, 17 September 2015
Short description: | p3@HMGB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HMGB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000339872, ENST00000399489, ENST00000426225, uc001usv.2_5end |
EntrezGene: | HMGB1 |
HGNC: | 4983 |
UniProt: | P09429Q5T7C4Q5T7C6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.67e-18 | 114 |
blood | 1.78e-08 | 15 |
haemolymphatic fluid | 1.78e-08 | 15 |
organism substance | 1.78e-08 | 15 |