FFCP PHASE2:Hg19::chr5:172755410..172755426,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:8614 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:11374 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=8614 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11374 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 01:54, 17 September 2015
Short description: | p1@STC2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_STC2_5end |
Coexpression cluster: | C2818_Smooth_Multipotent_hepatic_Preadipocyte_mesothelioma_Fibroblast_mesenchymal |
Association with transcript: | 23bp_to_ENST00000519511_5end |
EntrezGene: | STC2 |
HGNC: | 11374 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@STC2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.46e-18 | 76 |
embryonic cell | 2.35e-17 | 250 |
muscle precursor cell | 9.93e-13 | 58 |
myoblast | 9.93e-13 | 58 |
multi-potent skeletal muscle stem cell | 9.93e-13 | 58 |
mesodermal cell | 6.79e-12 | 121 |
smooth muscle cell | 2.31e-11 | 43 |
smooth muscle myoblast | 2.31e-11 | 43 |
muscle cell | 3.60e-11 | 55 |
epithelial cell | 4.22e-11 | 253 |
Showing 1 to 10 of 13 entries
Ontology term | p-value | n |
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trunk | 7.49e-21 | 199 |
unilaminar epithelium | 8.87e-14 | 148 |
trunk mesenchyme | 2.66e-13 | 122 |
somite | 2.76e-12 | 71 |
presomitic mesoderm | 2.76e-12 | 71 |
presumptive segmental plate | 2.76e-12 | 71 |
dermomyotome | 2.76e-12 | 71 |
trunk paraxial mesoderm | 2.76e-12 | 71 |
mesenchyme | 3.60e-12 | 160 |
entire embryonic mesenchyme | 3.60e-12 | 160 |
Showing 1 to 10 of 43 entries