FFCP PHASE1:Hg19::chr10:129845893..129845905,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:129845893..129845905,+ to FFCP PHASE1:Hg19::chr10:129845893..129845905,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5791 | |EntrezGene=5791 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9669 | |HGNC=9669 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000479896,ENST00000495530_5end | |||
|cluster_id=chr10:129845893..129845905,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_PTPRE_5end | |||
|id=chr10:129845893..129845905,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.18e-50!140;CL:0000037!2.42e-46!172;CL:0000566!2.42e-46!172;CL:0002087!2.84e-42!119;CL:0002032!7.51e-42!165;CL:0000837!7.51e-42!165;CL:0000988!4.01e-41!182;CL:0000766!3.05e-40!76;CL:0002031!9.29e-39!124;CL:0000557!4.61e-34!71;CL:0002194!5.35e-34!63;CL:0000576!5.35e-34!63;CL:0000040!5.35e-34!63;CL:0000559!5.35e-34!63;CL:0002009!1.07e-33!65;CL:0002057!8.00e-33!42;CL:0000763!2.72e-32!112;CL:0000049!2.72e-32!112;CL:0000839!9.07e-32!70;CL:0000860!5.22e-29!45;CL:0000542!7.47e-09!53;CL:0000051!7.47e-09!53;CL:0000838!1.06e-08!52;CL:0000094!5.36e-08!8;CL:0002393!6.73e-08!9;CL:0002397!6.73e-08!9;CL:0000084!1.46e-07!25;CL:0000827!1.46e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.09e-39;33!CL:0002057;3.09e-39;33!CL:0000473;8.60e-38;39!CL:0000234;8.60e-38;39!CL:0000576;4.15e-28;48!CL:0000766;3.01e-24;69!CL:0002087;3.97e-15;104!CL:0000738;5.11e-13;136!CL:0000763;2.31e-12;100!CL:0000094;2.44e-12;8!CL:0000988;3.46e-09;177!CL:0002393;4.11e-09;6!CL:0002397;4.11e-09;6!CL:0000081;2.42e-08;11!CL:0000791;7.23e-08;18!CL:0000789;7.23e-08;18!CL:0002419;7.23e-08;18!CL:0000084;1.10e-07;25!CL:0000235;2.25e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.77e-62,136;CL:0000473,3.74e-60,48;CL:0000234,3.74e-60,48;CL:0000766,6.90e-59,72;CL:0002087,1.35e-55,115;CL:0000860,4.32e-54,42;CL:0002057,4.32e-54,42;CL:0000037,7.17e-54,168;CL:0002194,1.02e-53,59;CL:0000576,1.02e-53,59;CL:0000040,1.02e-53,59;CL:0000559,1.02e-53,59;CL:0002009,1.09e-53,61;CL:0000988,1.79e-49,177;CL:0000557,2.96e-49,67;CL:0002031,1.02e-48,120;CL:0002032,2.54e-48,161;CL:0000837,2.54e-48,161;CL:0000839,5.53e-46,66;CL:0000763,8.45e-42,108;CL:0000049,8.45e-42,108;CL:0000134,3.33e-13,354;CL:0002320,2.11e-12,361;CL:0000094,2.42e-12,8;CL:0002393,3.54e-12,9;CL:0002397,3.54e-12,9;CL:0000219,5.04e-10,386;CL:0000081,2.41e-08,11;CL:0000791,4.54e-08,18;CL:0000789,4.54e-08,18;CL:0002420,4.54e-08,18;CL:0002419,4.54e-08,18;CL:0000790,4.54e-08,18;CL:0000034,6.58e-08,441;CL:0000084,7.99e-08,25;CL:0000827,7.99e-08,25;CL:0000838,1.24e-07,52;CL:0000542,2.28e-07,53;CL:0000051,2.28e-07,53;CL:0000723,2.42e-07,433;CL:0000235,2.49e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.15e-38;42!CL:0000049;9.06e-13;108!CL:0000790;7.23e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.51e-41!102;UBERON:0003061!7.51e-41!102;UBERON:0002193!1.59e-36!112;UBERON:0002371!6.48e-32!80;UBERON:0001474!2.25e-27!86;UBERON:0004765!9.43e-23!101;UBERON:0001434!9.43e-23!101;UBERON:0002405!1.57e-22!115;UBERON:0003081!4.68e-09!216;UBERON:0000178!6.57e-07!15;UBERON:0000179!6.57e-07!15;UBERON:0000463!6.57e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.60e-10;15!UBERON:0000179;1.60e-10;15!UBERON:0000463;1.60e-10;15!UBERON:0002390;1.48e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.10e-57,98;UBERON:0003061,6.10e-57,98;UBERON:0002193,8.70e-51,108;UBERON:0002371,1.61e-44,76;UBERON:0002405,1.09e-40,93;UBERON:0001474,8.94e-40,82;UBERON:0004765,1.50e-38,90;UBERON:0001434,1.28e-32,100;UBERON:0003081,5.94e-17,203;UBERON:0002204,5.77e-12,167;UBERON:0002384,9.22e-12,371;UBERON:0000178,1.61e-10,15;UBERON:0000179,1.61e-10,15;UBERON:0000463,1.61e-10,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0,0,0,0,0,0,1.14620108621927,1.06730766284929,0.787107813136792,25.9620422720277,25.332740274416,28.9506150601062,0.919421224478927,0.90361775633475,0.369754010166788,1.16200800870452,0.142169232487422,3.52320527201817,64.8174627982297,62.7704120581543,42.1001089188753,0.895661896959697,0.32389366601898,0.77272670290256,14.3944256391769,11.3362783106643,25.2287423635329,26.2644811703424,21.7918980651568,40.2618282163635,33.0846251170473,25.6160706529101,43.7492125293883,53.0908348334393,40.0200503821972,73.1303027609445,19.3889609728883,16.3743690034707,23.820689351179,33.9753120531702,36.9068381137508,45.3929359317319,13.1940520074686,16.7549472402171,23.8685860298309,25.828622237944,17.0215567407342,28.6498234537965,33.9185698096603,29.7245263499515,53.6456446421638,16.345786571101,25.7794345191295,31.9627011315293,14.1541041829001,16.7957396972384,18.2403021592287,24.7122988522289,28.5336096398862,33.1094708595985,9.69043328720245,13.327417372339,6.57590953552682,0,0.546138611262131,0,1.28019066769952,0.800791974072025,0,0,0,0,4.69789751496751,1.52909291250092,6.60856642895129,7.28661131875997,2.10707267820062,1.7703879310245,2.35806457649499,3.08402248499264,1.17030546773475,0.651844533267181,0.946895611469467,1.94826728407911,0.891283655081389,2.94605907474837,1.77227115666897,2.16643091012012,0.768547918354051,0.780356085359269,2.46656856905514,1.10540007114339,2.89803085735052,0.14828656316206,0.802622484269139,1.04535523804977,0.793165398882963,1.14966148080576,1.71813722741315,2.02415753615602,0.318565414324097,0,0,2.55977702432214,1.53583933385302,3.74792179657038,1.65744076430812,0,5.64498881029251,8.29064606928873,5.50332734754636,0,0,0,0,0,0.289693037921647,0.795285947051099,1.94653948121054,0,0,0,0.392937226493138,0.364295288292542,0.370784442784429,16.5519170763889,11.4925626617516,17.6834087490091,30.7652905353891,22.8797964312051,17.08704506116,0.198762407366705,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,212.166472072062,170.623316225263,0.872188104285069,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,0.818238361772504,1.43402297694502,0.121973706129595,0,0,0,0,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,1.42675371031213,1.1240175325762,1.60846355858609,1.20364978706088,0,0,0,0,0,0,0,0.380508304469197,0,0,3.44703808522356,6.08411089362018,3.26988557035202,1.87467667973554,1.00789276919316,1.98485136139341,2.4180801129769,1.74380363108377,3.4504441124869,0.492663237895943,0,0.207328115540772,0.720599767084807,0.88369703398466,0,0,0,0,0,0,0,0.448524337381443,0,0.22001485746285,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,6.08118903205952,2.00902836572851,16.8667151586425,0,0,0,0,0,0,1.68127715990291,10.2455995305002,7.97822026980214,11.1658441563381,0.254094624222463,0,0,0,0,154.29544693312,176.505260930375,185.243734505908,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,11.5790094628817,16.8257076638521,11.9534864739858,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,1.20303882181971,0.0920809889358963,0,0,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0.215915916102139,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0.618246069886334,0,0,0,1.30012049207304,0,0,0,0,0.137836572484531,0,0,0.255679882248303,0,0.991709492165869,1.53752053892085,4.08360679982669,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0,0,0,0.865999014529609,1.34060455107157,1.08890984861323,0.376575203107117,0.86101074534246,0,0,0.689170200620878,11.1638474031077,8.41100927856613,10.2536493691349,5.71756261098694,10.6954191002411,11.0240462902762,14.040817368191,3.17250070517708,0,0,1.47024129588619,0.371606350251437,2.74111504655245,1.28055318027145,0.159426272728822,0,1.34053759092657,6.35020748171649,4.54470716384378,0.561594356226918,2.28234679033192,0.47003968731907,0,0.338583555603207,0.321176150207399,0,0.425846237690326,2.06103206853459,0.307240764308458,0.671028323677248,0.166849141711909,0.781552381608161,0,0,0,0.33307196799782,0,0,1.31857361344705,0,0.557216921387392,0,1.67121139316383,1.18785872333055,0.307160702099232,0,0.281338832821026,0.222617410045812,1.31843099381408,0,0.597743964753209,0.828851746593443,0,0,0.246169610922139,0,0.269605053441981,0,0.511572370226872,0.0986434056369336,7.18449277040819,0,0,0,0,0,0,0.724999575434793,0.568967241427498,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,1.11538995422883,0.0769502585037971,0,0.922255617552241,1.16684937732704,0.108647371922008,1.27600463892768,0.0915975934018623,0,3.06579894587209,0.627921025580099,0,0,0,0,0,0.158936578980379,0,0,0,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0.208843899010911,0.202203398942031,0,0,0.18245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| ||
|short_description=p4@PTPRE | |||
}} | }} |
Latest revision as of 01:49, 17 September 2015
Short description: | p4@PTPRE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PTPRE_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000479896, ENST00000495530_5end |
EntrezGene: | PTPRE |
HGNC: | 9669 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.10e-57 | 98 |
blood island | 6.10e-57 | 98 |
hemolymphoid system | 8.70e-51 | 108 |
bone marrow | 1.61e-44 | 76 |
immune system | 1.09e-40 | 93 |
bone element | 8.94e-40 | 82 |
skeletal element | 1.50e-38 | 90 |
skeletal system | 1.28e-32 | 100 |
lateral plate mesoderm | 5.94e-17 | 203 |
musculoskeletal system | 5.77e-12 | 167 |
connective tissue | 9.22e-12 | 371 |
blood | 1.61e-10 | 15 |
haemolymphatic fluid | 1.61e-10 | 15 |
organism substance | 1.61e-10 | 15 |