FFCP PHASE1:Hg19::chr2:37311445..37311534,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54497 | |EntrezGene=54497 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29273 | |HGNC=29273 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P2D3 | |UniProt=Q9P2D3 | ||
|association_with_transcript=0bp_to_ENST00000233099,ENST00000354531,ENST00000424416,NM_019024,uc002rpp.1_5end | |association_with_transcript=0bp_to_ENST00000233099,ENST00000354531,ENST00000424416,NM_019024,uc002rpp.1_5end | ||
|cluster_id=chr2:37311445..37311534,- | |||
|coexpression_cluster_id=C1826 | |||
|description=CAGE_peak_1_at_HEATR5B_5end | |description=CAGE_peak_1_at_HEATR5B_5end | ||
|id=chr2:37311445..37311534,- | |id=chr2:37311445..37311534,- | ||
|ontology_enrichment_celltype=CL:0000542!1.90e-10!53;CL:0000051!1.90e-10!53;CL:0000838!3.08e-10!52;CL:0000791!3.30e-07!18;CL:0000789!3.30e-07!18;CL:0002420!3.30e-07!18;CL:0002419!3.30e-07!18;CL:0000790!3.30e-07!18;CL:0000037!3.47e-07!172;CL:0000566!3.47e-07!172;CL:0000236!3.87e-07!14 | |ontology_enrichment_celltype=CL:0000542!1.90e-10!53;CL:0000051!1.90e-10!53;CL:0000838!3.08e-10!52;CL:0000791!3.30e-07!18;CL:0000789!3.30e-07!18;CL:0002420!3.30e-07!18;CL:0002419!3.30e-07!18;CL:0000790!3.30e-07!18;CL:0000037!3.47e-07!172;CL:0000566!3.47e-07!172;CL:0000236!3.87e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000236;3.73e-08;13!CL:0000791;3.57e-07;18!CL:0000789;3.57e-07;18!CL:0002419;3.57e-07;18!CL:0000542;9.35e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.90e-10,53;CL:0000051,1.90e-10,53;CL:0000838,3.08e-10,52;CL:0000037,2.92e-07,168;CL:0000791,3.30e-07,18;CL:0000789,3.30e-07,18;CL:0002420,3.30e-07,18;CL:0002419,3.30e-07,18;CL:0000790,3.30e-07,18;CL:0000236,3.87e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;3.57e-07;18!UBERON:0006601;8.77e-07;82!CL:0000051;9.35e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.41e-31!115;UBERON:0001049!6.38e-18!57;UBERON:0005068!6.38e-18!57;UBERON:0006241!6.38e-18!57;UBERON:0007135!6.38e-18!57;UBERON:0003080!3.94e-16!42;UBERON:0002780!6.07e-16!41;UBERON:0001890!6.07e-16!41;UBERON:0006240!6.07e-16!41;UBERON:0001017!2.81e-15!82;UBERON:0002616!6.09e-15!59;UBERON:0000955!2.38e-14!69;UBERON:0006238!2.38e-14!69;UBERON:0005743!2.58e-14!86;UBERON:0001893!1.70e-13!34;UBERON:0002020!3.71e-13!34;UBERON:0003528!3.71e-13!34;UBERON:0002791!6.17e-13!33;UBERON:0000073!6.43e-13!94;UBERON:0001016!6.43e-13!94;UBERON:0001869!1.24e-12!32;UBERON:0002619!2.99e-12!22;UBERON:0001950!1.58e-11!20;UBERON:0000956!2.17e-10!25;UBERON:0000203!2.17e-10!25;UBERON:0002346!1.47e-08!90;UBERON:0003075!5.30e-08!86;UBERON:0007284!5.30e-08!86;UBERON:0000153!2.11e-07!129;UBERON:0007811!2.11e-07!129;UBERON:0003056!9.10e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.44e-12;22!UBERON:0002780;8.02e-12;41!UBERON:0001890;8.02e-12;41!UBERON:0001950;1.34e-11;20!UBERON:0001893;1.56e-11;34!UBERON:0001869;2.22e-11;32!UBERON:0003528;2.66e-11;34!UBERON:0002020;2.66e-11;34!UBERON:0002791;2.80e-11;32!UBERON:0000073;1.68e-10;53!UBERON:0002616;1.68e-10;53!UBERON:0000956;2.00e-10;25!UBERON:0000203;2.00e-10;25!UBERON:0007023;6.93e-09;114!UBERON:0001017;5.96e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.00e-30,114;UBERON:0001049,1.02e-17,56;UBERON:0005068,1.02e-17,56;UBERON:0006241,1.02e-17,56;UBERON:0007135,1.02e-17,56;UBERON:0000073,5.73e-17,53;UBERON:0002616,5.73e-17,53;UBERON:0002780,6.07e-16,41;UBERON:0001890,6.07e-16,41;UBERON:0003080,6.07e-16,41;UBERON:0006240,6.07e-16,41;UBERON:0001017,4.60e-15,81;UBERON:0000955,3.88e-14,68;UBERON:0006238,3.88e-14,68;UBERON:0001016,1.61e-13,89;UBERON:0001893,1.70e-13,34;UBERON:0003528,3.71e-13,34;UBERON:0002020,3.71e-13,34;UBERON:0001869,1.24e-12,32;UBERON:0002791,1.82e-12,32;UBERON:0002619,2.99e-12,22;UBERON:0001950,1.58e-11,20;UBERON:0000956,2.17e-10,25;UBERON:0000203,2.17e-10,25;UBERON:0002346,2.14e-08,86;UBERON:0003075,7.71e-08,82;UBERON:0007284,7.71e-08,82 | |||
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| ||
|short_description=p1@HEATR5B | |short_description=p1@HEATR5B | ||
}} | }} |
Latest revision as of 01:48, 17 September 2015
Short description: | p1@HEATR5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HEATR5B_5end |
Coexpression cluster: | C1826_Neutrophils_parietal_lung_occipital_cerebellum_temporal_CD4 |
Association with transcript: | 0bp_to_ENST00000233099, ENST00000354531, ENST00000424416, NM_019024, uc002rpp.1_5end |
EntrezGene: | HEATR5B |
HGNC: | 29273 |
UniProt: | Q9P2D3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.90e-10 | 53 |
common lymphoid progenitor | 1.90e-10 | 53 |
lymphoid lineage restricted progenitor cell | 3.08e-10 | 52 |
hematopoietic stem cell | 2.92e-07 | 168 |
mature alpha-beta T cell | 3.30e-07 | 18 |
alpha-beta T cell | 3.30e-07 | 18 |
immature T cell | 3.30e-07 | 18 |
mature T cell | 3.30e-07 | 18 |
immature alpha-beta T cell | 3.30e-07 | 18 |
B cell | 3.87e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.00e-30 | 114 |
neural tube | 1.02e-17 | 56 |
neural rod | 1.02e-17 | 56 |
future spinal cord | 1.02e-17 | 56 |
neural keel | 1.02e-17 | 56 |
regional part of nervous system | 5.73e-17 | 53 |
regional part of brain | 5.73e-17 | 53 |
regional part of forebrain | 6.07e-16 | 41 |
forebrain | 6.07e-16 | 41 |
anterior neural tube | 6.07e-16 | 41 |
future forebrain | 6.07e-16 | 41 |
central nervous system | 4.60e-15 | 81 |
brain | 3.88e-14 | 68 |
future brain | 3.88e-14 | 68 |
nervous system | 1.61e-13 | 89 |
telencephalon | 1.70e-13 | 34 |
brain grey matter | 3.71e-13 | 34 |
gray matter | 3.71e-13 | 34 |
cerebral hemisphere | 1.24e-12 | 32 |
regional part of telencephalon | 1.82e-12 | 32 |
regional part of cerebral cortex | 2.99e-12 | 22 |
neocortex | 1.58e-11 | 20 |
cerebral cortex | 2.17e-10 | 25 |
pallium | 2.17e-10 | 25 |
neurectoderm | 2.14e-08 | 86 |
neural plate | 7.71e-08 | 82 |
presumptive neural plate | 7.71e-08 | 82 |