FFCP PHASE1:Hg19::chr13:30423873..30423882,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5412 | |EntrezGene=5412 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=12504 | |HGNC=12504 | ||
|TSSclassifier=strong | |||
|UniProt=B2R4J1 | |UniProt=B2R4J1 | ||
|association_with_transcript=-10bp_to_AK311846_5end | |association_with_transcript=-10bp_to_AK311846_5end | ||
|cluster_id=chr13:30423873..30423882,- | |||
|description=CAGE_peak_12_at_UBL3_5end | |description=CAGE_peak_12_at_UBL3_5end | ||
|id=chr13:30423873..30423882,- | |id=chr13:30423873..30423882,- | ||
|ontology_enrichment_celltype=CL:0000766!7.21e-16!76;CL:0000557!3.67e-15!71;CL:0002009!5.21e-15!65;CL:0000860!5.87e-14!45;CL:0002194!1.30e-13!63;CL:0000576!1.30e-13!63;CL:0000040!1.30e-13!63;CL:0000559!1.30e-13!63;CL:0000839!2.31e-13!70;CL:0002057!2.82e-13!42;CL:0000738!6.21e-10!140;CL:0000763!5.83e-09!112;CL:0000049!5.83e-09!112;CL:0000990!2.10e-08!8;CL:0000451!1.06e-07!10 | |ontology_enrichment_celltype=CL:0000766!7.21e-16!76;CL:0000557!3.67e-15!71;CL:0002009!5.21e-15!65;CL:0000860!5.87e-14!45;CL:0002194!1.30e-13!63;CL:0000576!1.30e-13!63;CL:0000040!1.30e-13!63;CL:0000559!1.30e-13!63;CL:0000839!2.31e-13!70;CL:0002057!2.82e-13!42;CL:0000738!6.21e-10!140;CL:0000763!5.83e-09!112;CL:0000049!5.83e-09!112;CL:0000990!2.10e-08!8;CL:0000451!1.06e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.03e-17;3!CL:0000860;1.48e-17;33!CL:0002057;1.48e-17;33!CL:0001014;2.07e-13;2!CL:0001016;2.07e-13;2!CL:0000473;2.32e-13;39!CL:0000234;2.32e-13;39!CL:0000766;3.00e-13;69!CL:0000576;1.24e-12;48!CL:0002393;2.59e-09;6!CL:0002397;2.59e-09;6!CL:0000511;4.97e-07;1!CL:0002625;4.97e-07;1!CL:0000216;4.97e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.66e-24,42;CL:0002057,2.66e-24,42;CL:0000473,6.72e-21,48;CL:0000234,6.72e-21,48;CL:0002009,8.10e-21,61;CL:0000557,1.12e-18,67;CL:0002541,2.98e-17,3;CL:0000766,3.86e-17,72;CL:0002194,3.88e-16,59;CL:0000576,3.88e-16,59;CL:0000040,3.88e-16,59;CL:0000559,3.88e-16,59;CL:0000839,3.78e-14,66;CL:0000763,1.23e-13,108;CL:0000049,1.23e-13,108;CL:0001014,2.15e-13,2;CL:0001016,2.15e-13,2;CL:0000738,4.55e-10,136;CL:0002031,5.04e-09,120;CL:0002032,6.16e-08,161;CL:0000837,6.16e-08,161;CL:0000988,7.50e-08,177;CL:0000037,1.87e-07,168;CL:0000511,2.67e-07,1;CL:0002625,2.67e-07,1;CL:0000216,2.67e-07,1;CL:0002087,5.48e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;5.06e-18;42!UBERON:0008801;4.97e-07;1!UBERON:0005425;4.97e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.53e-11!80;UBERON:0001474!3.54e-10!86;UBERON:0002390!3.87e-10!102;UBERON:0003061!3.87e-10!102;UBERON:0007023!2.86e-09!115;UBERON:0004765!3.14e-09!101;UBERON:0001434!3.14e-09!101;UBERON:0000062!3.20e-09!511;UBERON:0002193!8.28e-09!112;UBERON:0002405!8.15e-08!115;UBERON:0001049!4.32e-07!57;UBERON:0005068!4.32e-07!57;UBERON:0006241!4.32e-07!57;UBERON:0007135!4.32e-07!57 | |ontology_enrichment_uberon=UBERON:0002371!1.53e-11!80;UBERON:0001474!3.54e-10!86;UBERON:0002390!3.87e-10!102;UBERON:0003061!3.87e-10!102;UBERON:0007023!2.86e-09!115;UBERON:0004765!3.14e-09!101;UBERON:0001434!3.14e-09!101;UBERON:0000062!3.20e-09!511;UBERON:0002193!8.28e-09!112;UBERON:0002405!8.15e-08!115;UBERON:0001049!4.32e-07!57;UBERON:0005068!4.32e-07!57;UBERON:0006241!4.32e-07!57;UBERON:0007135!4.32e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.03e-17;3!UBERON:0000920;1.03e-17;3!UBERON:0001831;4.97e-07;1!UBERON:0001136;4.97e-07;1!UBERON:0000941;4.97e-07;1!UBERON:0001343;4.97e-07;1!UBERON:0004913;4.97e-07;1!UBERON:0001785;4.97e-07;1!UBERON:0002464;4.97e-07;1!UBERON:0004904;4.97e-07;1!UBERON:0003703;4.97e-07;1!UBERON:0001021;4.97e-07;1!UBERON:0004910;4.97e-07;1!UBERON:0004813;4.97e-07;1!UBERON:0001567;4.97e-07;1!UBERON:0001174;4.97e-07;1!UBERON:0004914;4.97e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.98e-17,3;UBERON:0002371,4.27e-16,76;UBERON:0001474,1.10e-14,82;UBERON:0002390,1.99e-13,98;UBERON:0003061,1.99e-13,98;UBERON:0004765,4.25e-13,90;UBERON:0002405,1.43e-12,93;UBERON:0002193,7.24e-12,108;UBERON:0001434,1.81e-11,100;UBERON:0003124,1.10e-07,7;UBERON:0001136,2.67e-07,1;UBERON:0001343,2.67e-07,1;UBERON:0004910,2.67e-07,1;UBERON:0005154,2.67e-07,1;UBERON:0005295,2.67e-07,1;UBERON:0004813,2.67e-07,1;UBERON:0005297,2.67e-07,1;UBERON:0005294,2.67e-07,1;UBERON:0010141,2.67e-07,1;UBERON:0005891,2.67e-07,1;UBERON:0000941,3.20e-07,1;UBERON:0001785,3.20e-07,1;UBERON:0002464,3.20e-07,1;UBERON:0004904,3.20e-07,1;UBERON:0001021,3.20e-07,1;UBERON:0003902,3.20e-07,1;UBERON:0005425,3.20e-07,1;UBERON:0001831,8.18e-07,1;UBERON:0001567,8.18e-07,1;UBERON:0008801,8.18e-07,1;UBERON:0004913,9.18e-07,1;UBERON:0003703,9.18e-07,1;UBERON:0001174,9.18e-07,1;UBERON:0004914,9.18e-07,1 | |||
|phase1_expression=0.54503513781167,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0.393364276848904,0.767658796194425,0.928896739896456,0,0,0,0,0,0,2.21598163412751,1.00272223735071,1.51907609501096,0.671746422719773,0.971680998056939,0.257575567634187,0.145398238779565,0,0.242584061187816,0.464858073811369,1.23350366406548,0,0.575384784644301,0.768482119587302,0.709446689665756,1.37898272294647,1.93645405075148,1.35426486594342,0.376484679085209,0.272906150057846,0.674170453335254,0.918251677112708,0.641858054152187,0,0,0.797854630486527,1.27867425159808,1.45104619314292,1.70215567407342,1.24564449799115,0.502497330513487,0,0.217188844705117,1.21079900526674,2.20966581592539,2.53169909952708,0,0,0.419317291016752,0,0,0.16072558669708,0,0,0.547992461293902,0,0,0,0,0,0,0,0.954053754535364,0,0,0.382273228125229,0,1.12101712596307,0,0,0.393010762749165,0,0,0,0,1.94826728407911,0.111410456885174,0.294605907474837,0.443067789167242,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0,0,0.087834785693126,0.130979075497713,0,0,0.97364218096405,0.870648686496336,0.930705723632056,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0.18611685633159,0.506328996723799,0.292311015483596,0.252433774244115,0.276149695926898,0.484938170456436,0.710019185033229,0.403008392910561,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,1.26755034821831,0,0,0,0.737930631258681,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0.702012795417713,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0.829312462163088,0.576479813667846,0.37872730027914,0.126995788584338,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0.394061520403854,0.215627574859517,0.256686072559497,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,0,2.07207756718018,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0.413536052245775,0.647142602455851,0.533637789017222,0,0,0.604780586659361,0,0.306923946576125,0,0.256278298511402,0,0,0,0,0,0.164254312027618,0,0,0.604297247958111,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0.354761064070598,0,0.658589785919804,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0.95497793895076,0.890894042497916,0.614321404198464,0,0,0,0.16480387422676,0,0.19924798825107,0,0.503865495708552,0.102268682502155,0,0.622079175323615,0.0898683511473268,0.179021174675609,0,0.0986434056369336,0,0,0.969332746095218,0.556608588971108,0,0.520855522170466,0.349839999984783,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0.886642856860642,0.219385397153973,0,0.697118721393016,0.0769502585037971,0,0,0,0.217294743844016,1.27600463892768,1.00757352742049,1.06606955203727,0,0,0.332423363800313,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0.216388639742091,0,0.176915129006678,1.22206028986725,1.18608451472249,0,0.104421949505455,0.539209063845416,0.802577647298789,0.468528891450678,0,0,0,0,1.20990716048664,0.30607276163049,0.126373159256976,0.901940516486955,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0.0967563312890851,0.219267951258557,0.164230914106418,0.484945082442097,0,0,0,0.19871461170299,0.126621591911757,0,0.0801588202515337,0.213452994739353,0,0,0.229073192331831,0,0,0,0.235694034616795,0.135904206073614,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0.201550417460179,0,0,0.0787831823072236,0,0,0.0984274815147488,0,0,0.136203406111576,0,0.137539436597234,0,5.84932118033901,3.0952078182318,0.303747783290123,0,0.236417121897595,0.104909176269996,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0.387848869084652,0.13223260174269,0.171086837884329,0,0.320362237703084,0.471612915298998,0.828478110694391,0,0,0,0,0.544017803369474,1.0027595760908,0.306345576763462,0.327872630709804,0,0.886068179966986,0.122026264901963,0,1.14681839138014,0.221858103073705,0.558867626472451,0,0,0.151649117541648,0.285465333544967,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0.15543720058278,0,0,0.449803112163605,0,0,0,0,0,0,0.406870733204662,0,0,0,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|short_description=p12@UBL3 | |short_description=p12@UBL3 | ||
}} | }} |
Latest revision as of 01:31, 17 September 2015
Short description: | p12@UBL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_UBL3_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_AK311846_5end |
EntrezGene: | UBL3 |
HGNC: | 12504 |
UniProt: | B2R4J1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.66e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.66e-24 | 42 |
defensive cell | 6.72e-21 | 48 |
phagocyte | 6.72e-21 | 48 |
macrophage dendritic cell progenitor | 8.10e-21 | 61 |
granulocyte monocyte progenitor cell | 1.12e-18 | 67 |
chorionic membrane mesenchymal stem cell | 2.98e-17 | 3 |
myeloid leukocyte | 3.86e-17 | 72 |
monopoietic cell | 3.88e-16 | 59 |
monocyte | 3.88e-16 | 59 |
monoblast | 3.88e-16 | 59 |
promonocyte | 3.88e-16 | 59 |
myeloid lineage restricted progenitor cell | 3.78e-14 | 66 |
myeloid cell | 1.23e-13 | 108 |
common myeloid progenitor | 1.23e-13 | 108 |
CD1a-positive Langerhans cell | 2.15e-13 | 2 |
immature CD1a-positive Langerhans cell | 2.15e-13 | 2 |
leukocyte | 4.55e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 5.04e-09 | 120 |
hematopoietic oligopotent progenitor cell | 6.16e-08 | 161 |
hematopoietic multipotent progenitor cell | 6.16e-08 | 161 |
hematopoietic cell | 7.50e-08 | 177 |
hematopoietic stem cell | 1.87e-07 | 168 |
androgen binding protein secreting cell | 2.67e-07 | 1 |
seminiferous tubule epithelial cell | 2.67e-07 | 1 |
Sertoli cell | 2.67e-07 | 1 |
nongranular leukocyte | 5.48e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.98e-17 | 3 |
bone marrow | 4.27e-16 | 76 |
bone element | 1.10e-14 | 82 |
hematopoietic system | 1.99e-13 | 98 |
blood island | 1.99e-13 | 98 |
skeletal element | 4.25e-13 | 90 |
immune system | 1.43e-12 | 93 |
hemolymphoid system | 7.24e-12 | 108 |
skeletal system | 1.81e-11 | 100 |
chorion | 1.10e-07 | 7 |
mesothelium | 2.67e-07 | 1 |
seminiferous tubule of testis | 2.67e-07 | 1 |
epithelium of male gonad | 2.67e-07 | 1 |
epithelial cord | 2.67e-07 | 1 |
sex cord | 2.67e-07 | 1 |
seminiferous tubule epithelium | 2.67e-07 | 1 |
testis sex cord | 2.67e-07 | 1 |
genital ridge | 2.67e-07 | 1 |
primitive sex cord of indifferent gonad | 2.67e-07 | 1 |
coelomic epithelium | 2.67e-07 | 1 |
cranial nerve II | 3.20e-07 | 1 |
cranial nerve | 3.20e-07 | 1 |
nerve trunk | 3.20e-07 | 1 |
nerve connecting eye with brain | 3.20e-07 | 1 |
nerve | 3.20e-07 | 1 |
retinal neural layer | 3.20e-07 | 1 |
presumptive neural retina | 3.20e-07 | 1 |
parotid gland | 8.18e-07 | 1 |
cheek | 8.18e-07 | 1 |
parotid gland primordium | 8.18e-07 | 1 |
hepatopancreatic ampulla | 9.18e-07 | 1 |
extrahepatic bile duct | 9.18e-07 | 1 |
common bile duct | 9.18e-07 | 1 |
duodenal papilla | 9.18e-07 | 1 |