FFCP PHASE1:Hg19::chr2:135011731..135011735,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4249 | |EntrezGene=4249 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7049 | |HGNC=7049 | ||
|TSSclassifier=strong | |||
|UniProt=Q09328 | |UniProt=Q09328 | ||
|association_with_transcript=-94bp_to_ENST00000281923,NM_002410,uc002ttv.1_5end | |association_with_transcript=-94bp_to_ENST00000281923,NM_002410,uc002ttv.1_5end | ||
|cluster_id=chr2:135011731..135011735,+ | |||
|coexpression_cluster_id=C179 | |||
|description=CAGE_peak_10_at_MGAT5_5end | |description=CAGE_peak_10_at_MGAT5_5end | ||
|id=chr2:135011731..135011735,+ | |id=chr2:135011731..135011735,+ | ||
|ontology_enrichment_celltype=CL:0000236!1.60e-33!14;CL:0000945!1.09e-25!24;CL:0000826!1.09e-25!24;CL:0000842!4.39e-12!3;CL:0000838!6.81e-12!52;CL:0000542!1.32e-11!53;CL:0000051!1.32e-11!53;CL:0000224!3.59e-09!4;CL:0000738!4.03e-07!140 | |ontology_enrichment_celltype=CL:0000236!1.60e-33!14;CL:0000945!1.09e-25!24;CL:0000826!1.09e-25!24;CL:0000842!4.39e-12!3;CL:0000838!6.81e-12!52;CL:0000542!1.32e-11!53;CL:0000051!1.32e-11!53;CL:0000224!3.59e-09!4;CL:0000738!4.03e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000236;6.79e-97;13!CL:0000945;6.92e-52;24!CL:0000542;1.14e-18;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,7.57e-90,14;CL:0000945,7.27e-52,24;CL:0000826,7.27e-52,24;CL:0000838,3.69e-23,52;CL:0000542,1.08e-22,53;CL:0000051,1.08e-22,53;CL:0002087,2.17e-11,115;CL:0000738,2.29e-09,136;CL:0002031,4.76e-09,120;CL:0000037,3.03e-07,168;CL:0000988,8.72e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.14e-18;53!UBERON:0001045;8.19e-12;1!UBERON:0008801;1.55e-11;1!UBERON:0004872;8.10e-07;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.81e-15!15;UBERON:0000179!5.81e-15!15;UBERON:0000463!5.81e-15!15;UBERON:0003127!2.81e-08!2;UBERON:0007023!3.70e-07!115 | |ontology_enrichment_uberon=UBERON:0000178!5.81e-15!15;UBERON:0000179!5.81e-15!15;UBERON:0000463!5.81e-15!15;UBERON:0003127!2.81e-08!2;UBERON:0007023!3.70e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;8.19e-12;1!UBERON:0001154;8.19e-12;1!UBERON:0001153;8.19e-12;1!UBERON:0009854;8.19e-12;1!UBERON:0001961;8.19e-12;1!UBERON:0001744;8.19e-12;1!UBERON:0001042;8.19e-12;1!UBERON:0001735;8.19e-12;1!UBERON:0000029;1.55e-11;1!UBERON:0001831;1.55e-11;1!UBERON:0001567;1.55e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,6.97e-12,1;UBERON:0001961,6.97e-12,1;UBERON:0001744,6.97e-12,1;UBERON:0001735,6.97e-12,1;UBERON:0001154,8.64e-12,1;UBERON:0001153,8.64e-12,1;UBERON:0001045,8.64e-12,1;UBERON:0000029,1.47e-11,1;UBERON:0001831,1.81e-11,1;UBERON:0001567,1.81e-11,1;UBERON:0008801,1.81e-11,1 | |||
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| ||
|short_description=p10@MGAT5 | |short_description=p10@MGAT5 | ||
}} | }} |
Latest revision as of 01:19, 17 September 2015
Short description: | p10@MGAT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_MGAT5_5end |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | -94bp_to_ENST00000281923, NM_002410, uc002ttv.1_5end |
EntrezGene: | MGAT5 |
HGNC: | 7049 |
UniProt: | Q09328 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 7.57e-90 | 14 |
lymphocyte of B lineage | 7.27e-52 | 24 |
pro-B cell | 7.27e-52 | 24 |
lymphoid lineage restricted progenitor cell | 3.69e-23 | 52 |
lymphocyte | 1.08e-22 | 53 |
common lymphoid progenitor | 1.08e-22 | 53 |
nongranular leukocyte | 2.17e-11 | 115 |
leukocyte | 2.29e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 4.76e-09 | 120 |
hematopoietic stem cell | 3.03e-07 | 168 |
hematopoietic cell | 8.72e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
tonsil | 6.97e-12 | 1 |
mucosa-associated lymphoid tissue | 6.97e-12 | 1 |
lymphoid tissue | 6.97e-12 | 1 |
tonsillar ring | 6.97e-12 | 1 |
vermiform appendix | 8.64e-12 | 1 |
caecum | 8.64e-12 | 1 |
midgut | 8.64e-12 | 1 |
lymph node | 1.47e-11 | 1 |
parotid gland | 1.81e-11 | 1 |
cheek | 1.81e-11 | 1 |
parotid gland primordium | 1.81e-11 | 1 |