FFCP PHASE1:Hg19::chr2:135011615..135011625,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4249 | |EntrezGene=4249 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7049 | |HGNC=7049 | ||
|TSSclassifier=strong | |||
|UniProt=Q09328 | |UniProt=Q09328 | ||
|association_with_transcript=-204bp_to_ENST00000281923,NM_002410,uc002ttv.1_5end | |association_with_transcript=-204bp_to_ENST00000281923,NM_002410,uc002ttv.1_5end | ||
|cluster_id=chr2:135011615..135011625,+ | |||
|coexpression_cluster_id=C47 | |coexpression_cluster_id=C47 | ||
|description=CAGE_peak_11_at_MGAT5_5end | |description=CAGE_peak_11_at_MGAT5_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!4.54e-36!24;CL:0000826!4.54e-36!24;CL:0000236!9.95e-26!14;CL:0000838!1.78e-14!52;CL:0000542!3.96e-14!53;CL:0000051!3.96e-14!53;CL:0002087!3.14e-08!119;CL:0000738!4.10e-07!140 | |ontology_enrichment_celltype=CL:0000945!4.54e-36!24;CL:0000826!4.54e-36!24;CL:0000236!9.95e-26!14;CL:0000838!1.78e-14!52;CL:0000542!3.96e-14!53;CL:0000051!3.96e-14!53;CL:0002087!3.14e-08!119;CL:0000738!4.10e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000236;2.13e-53;13!CL:0000945;1.16e-44;24!CL:0000542;5.76e-17;53 | |ontology_enrichment_celltype_v019=CL:0000236;2.13e-53;13!CL:0000945;1.16e-44;24!CL:0000542;5.76e-17;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.40e-49,14;CL:0000945,9.69e-45,24;CL:0000826,9.69e-45,24;CL:0000838,5.27e-20,52;CL:0000542,1.33e-19,53;CL:0000051,1.33e-19,53;CL:0002087,3.10e-08,115;CL:0002031,7.74e-08,120;CL:0000738,9.23e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000051;5.76e-17;53!UBERON:0001045;8.84e-13;1!UBERON:0006298;3.26e-12;1!UBERON:0004872;3.14e-07;7!UBERON:0006965;9.80e-07;2 | |ontology_enrichment_development_v019=CL:0000051;5.76e-17;53!UBERON:0001045;8.84e-13;1!UBERON:0006298;3.26e-12;1!UBERON:0004872;3.14e-07;7!UBERON:0006965;9.80e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;3.26e-12;1!DOID:0050177;3.26e-12;1!DOID:0050427;3.26e-12;1 | |ontology_enrichment_disease_v019=DOID:630;3.26e-12;1!DOID:0050177;3.26e-12;1!DOID:0050427;3.26e-12;1 | ||
|ontology_enrichment_disease_v019_2=DOID:630,2.46e-12,1;DOID:0050177,2.46e-12,1;DOID:0050427,2.46e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0001155!6.49e-10!9;UBERON:0001829!2.01e-08!2;UBERON:0004177!2.56e-08!7;UBERON:0000059!4.75e-08!11;UBERON:0007023!1.50e-07!115;UBERON:0004921!5.70e-07!129;UBERON:0004185!5.70e-07!129 | |ontology_enrichment_uberon=UBERON:0001155!6.49e-10!9;UBERON:0001829!2.01e-08!2;UBERON:0004177!2.56e-08!7;UBERON:0000059!4.75e-08!11;UBERON:0007023!1.50e-07!115;UBERON:0004921!5.70e-07!129;UBERON:0004185!5.70e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;8.84e-13;1!UBERON:0001153;8.84e-13;1!UBERON:0009854;8.84e-13;1!UBERON:0002372;1.48e-12;1!UBERON:0001961;1.48e-12;1!UBERON:0001744;1.48e-12;1!UBERON:0001042;1.48e-12;1!UBERON:0001735;1.48e-12;1!UBERON:0000029;3.26e-12;1!UBERON:0001736;3.26e-12;1!UBERON:0006562;6.61e-07;2!UBERON:0001829;9.80e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0001154;8.84e-13;1!UBERON:0001153;8.84e-13;1!UBERON:0009854;8.84e-13;1!UBERON:0002372;1.48e-12;1!UBERON:0001961;1.48e-12;1!UBERON:0001744;1.48e-12;1!UBERON:0001042;1.48e-12;1!UBERON:0001735;1.48e-12;1!UBERON:0000029;3.26e-12;1!UBERON:0001736;3.26e-12;1!UBERON:0006562;6.61e-07;2!UBERON:0001829;9.80e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,8.85e-13,1;UBERON:0001153,8.85e-13,1;UBERON:0001045,8.85e-13,1;UBERON:0002372,1.57e-12,1;UBERON:0001961,1.57e-12,1;UBERON:0001744,1.57e-12,1;UBERON:0001735,1.57e-12,1;UBERON:0000029,2.20e-12,1;UBERON:0001736,4.31e-12,1;UBERON:0006298,4.31e-12,1 | |||
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| ||
|short_description=p11@MGAT5 | |short_description=p11@MGAT5 | ||
}} | }} |
Latest revision as of 01:16, 17 September 2015
Short description: | p11@MGAT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_MGAT5_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -204bp_to_ENST00000281923, NM_002410, uc002ttv.1_5end |
EntrezGene: | MGAT5 |
HGNC: | 7049 |
UniProt: | Q09328 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.40e-49 | 14 |
lymphocyte of B lineage | 9.69e-45 | 24 |
pro-B cell | 9.69e-45 | 24 |
lymphoid lineage restricted progenitor cell | 5.27e-20 | 52 |
lymphocyte | 1.33e-19 | 53 |
common lymphoid progenitor | 1.33e-19 | 53 |
nongranular leukocyte | 3.10e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 7.74e-08 | 120 |
leukocyte | 9.23e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 8.85e-13 | 1 |
caecum | 8.85e-13 | 1 |
midgut | 8.85e-13 | 1 |
tonsil | 1.57e-12 | 1 |
mucosa-associated lymphoid tissue | 1.57e-12 | 1 |
lymphoid tissue | 1.57e-12 | 1 |
tonsillar ring | 1.57e-12 | 1 |
lymph node | 2.20e-12 | 1 |
submandibular gland | 4.31e-12 | 1 |
submandibular gland primordium | 4.31e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.46e-12 | 1 |
monogenic disease | 2.46e-12 | 1 |
xeroderma pigmentosum | 2.46e-12 | 1 |