FFCP PHASE1:Hg19::chr6:18155285..18155316,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7172 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12014 | |||
|TSSclassifier=strong | |||
|UniProt=P51580 | |||
|association_with_transcript=0bp_to_ENST00000309983_5end | |||
|cluster_id=chr6:18155285..18155316,- | |||
|description=CAGE_peak_1_at_TPMT_5end | |||
|id=chr6:18155285..18155316,- | |||
|ontology_enrichment_celltype=CL:0000766!1.06e-10!76;CL:0002009!1.52e-10!65;CL:0000839!2.52e-10!70;CL:0002194!4.01e-10!63;CL:0000576!4.01e-10!63;CL:0000040!4.01e-10!63;CL:0000559!4.01e-10!63;CL:0000763!5.22e-10!112;CL:0000049!5.22e-10!112;CL:0000557!9.00e-10!71;CL:0000860!3.06e-07!45;CL:0002393!8.99e-07!9;CL:0002397!8.99e-07!9;CL:0002057!9.57e-07!42 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.70e-10,72;CL:0002009,8.24e-10,61;CL:0000839,1.35e-09,66;CL:0002194,2.15e-09,59;CL:0000576,2.15e-09,59;CL:0000040,2.15e-09,59;CL:0000559,2.15e-09,59;CL:0000763,2.51e-09,108;CL:0000049,2.51e-09,108;CL:0000557,4.70e-09,67;CL:0000473,5.43e-09,48;CL:0000234,5.43e-09,48;CL:0002393,8.99e-07,9;CL:0002397,8.99e-07,9;CL:0000860,9.57e-07,42;CL:0002057,9.57e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.43e-08!86;UBERON:0002371!2.49e-08!80;UBERON:0004765!2.60e-08!101;UBERON:0001434!2.60e-08!101;UBERON:0002390!7.89e-07!102;UBERON:0003061!7.89e-07!102;UBERON:0001737!8.32e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.41e-07;9!UBERON:0001557;8.41e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,6.74e-08,82;UBERON:0002371,1.18e-07,76;UBERON:0004765,6.68e-07,90;UBERON:0001737,8.32e-07,9 | |||
|phase1_expression=12.5358081696684,14.3447351006959,20.0155253816279,7.00513088471913,12.0679495495368,15.7020934338066,22.796989035148,20.8467558230854,2.35067065379855,11.0580271425679,2.09340350391728,13.3249236999405,12.3970479767373,14.2331305904054,10.2733186475654,23.5313801258121,19.8889194247912,10.2243412654232,12.6862527685532,18.9606429438253,5.71201935483908,6.89600387251793,18.8915751506497,18.6149218099122,14.1863182742127,22.7711949128895,20.0325438257868,20.5435139228703,33.0425992553079,30.3225224496798,25.5446603471525,22.9855306119732,8.73497164456925,9.98335827450327,6.19737604642413,17.0603078984906,11.1568166947242,58.723513304379,50.5372007624757,33.2026632195253,25.7502795375913,33.6849412659739,29.6211902779315,9.01469080433301,16.2486655786188,16.0105480383959,16.7348906572093,20.9695622891131,23.847390558923,21.8646218164834,33.8132132618413,36.1817811729535,19.6505038019873,23.2374486090177,16.251178391321,10.9180556934711,18.5576182039335,26.0679241956298,17.7528657575123,26.3161802202397,17.2621023965741,15.8328624089624,27.9249120670285,18.7538890234385,17.7027635563436,27.8018760098659,22.4216009638407,23.3661258688771,26.5956288394303,33.8814597739982,18.1619850790011,35.3546530548062,31.0133139692067,84.9246250974006,80.5770296867515,68.5583770812389,39.8766640570058,37.3940463175351,45.6460666219708,47.3121154610473,57.288003033338,65.2111028939743,7.03984977845291,5.46138611262132,0.889509253863555,2.98711155796555,4.00395987036012,4.02326707968138,5.2883589822789,4.77026877267682,4.55370375287559,3.52342313622563,4.58727873750275,15.8605594294831,17.9362740154092,18.1735018494803,13.5729741378545,12.9693551707224,7.60725546298184,19.226446969928,10.1035902656413,7.101717086021,7.79306913631645,28.1868455919489,17.9709603559651,19.7165166179423,27.0803863765016,17.2923281629661,17.9481899632632,11.675091226861,12.712100818149,17.3881851441032,8.45233410023744,12.0393372640371,10.4535523804977,15.0701425787763,9.58051234004803,13.4014703738226,20.2415753615602,10.5126586726952,21.4857539772618,10.4549724889321,23.6402936952103,25.4693356197293,18.7396089828519,16.8111848951252,18.8859439291841,17.7413934037765,12.5696892018248,12.4548987339207,19.5045493051169,12.7433163343691,20.7137350186519,50.6014813338393,12.0321098552613,15.9331170856906,35.7878676172995,18.0054902011975,18.4342893469932,14.4124108350667,11.155017783027,31.1730199684556,5.46442932438813,8.89882662682631,92.8205545852394,94.3783176162028,75.6530795352343,7.63169997777094,8.57992366170192,11.1437250398869,10.3356451830687,10.3228151412735,13.1913390610886,14.1326985481002,8.38998872419812,12.380311887303,6.26984899610432,11.1119206442811,20.9902094985159,15.7318687999395,17.3216606356933,24.3287073829924,5.36936526605973,21.6921217404063,9.72170337458112,25.718321745815,18.4114085553459,17.7926139163649,4.5994991239765,4.74632829784064,8.06087673293792,15.8136500923276,27.1446184903828,10.9023513035634,35.7819805220629,26.0858854029034,15.6242833359598,17.2101972449288,29.0828073402653,10.0921968025615,10.6748995729705,10.853372130355,15.5605517699883,19.3983367780351,14.2211855708709,9.98959022456547,5.76175924479999,6.32667865951251,13.1107232268735,13.1208518955223,13.5998299302139,17.497740297921,18.6153886023351,18.5395064846968,26.744196434391,14.9857867120357,15.7055187387163,22.572054288359,14.5887488274349,30.0353249439549,8.62341770179486,20.2003336744879,14.5137483051478,31.5853091651969,29.850478219897,27.2774138261127,14.5730917139399,24.2744871962445,23.5000422752409,36.0911987103379,34.332967987849,16.5050102846421,46.2705856280591,26.0216945446085,29.7786970130544,13.33333024706,43.3594672967334,24.4860761016791,32.8618138153009,26.5099533182851,22.7206139210633,53.499364158877,22.0428770003634,34.4004318630668,30.2748193855826,29.8276779204564,20.6135563359016,28.4939001891193,22.3092370309475,16.79309091249,16.6531761577915,18.2488679537915,9.38697193978896,22.513432836751,8.28809528114883,14.3954057689914,23.8220228950963,55.9591164188462,48.7209754325714,50.8533273054147,55.0366923934646,50.5480310294382,51.9622655853302,56.8988120435894,58.0815536771024,52.7103605016555,15.5012645471176,5.60967095213783,13.9935163852676,2.94017422771084,111.544430643211,57.0039785673023,66.7592594549987,6.18048339180511,24.2287223929934,19.2155947534349,26.3400684980701,17.9842805212191,38.9047123233011,28.2394757733515,6.51616610620649,10.3993478527958,14.4331342025273,21.099333705464,13.7368172255911,18.0458059701342,12.9635943521451,16.9326195488792,4.74122638775565,6.86788929675898,74.1113188323066,136.892495106454,79.3690406621809,24.370796836562,39.9797465113286,45.6515813120484,32.2410681730254,28.4821259743683,3.4504441124869,62.5682312127848,50.5398011235918,11.817702585824,14.7002352485301,14.7703647108865,21.6527819536296,8.02175693672383,2.34434894420094,3.4214489204541,20.5654985406647,22.5257293382938,15.7204537946818,14.0163855431701,13.950722202665,16.5011143097138,17.9687684903311,7.15312891703765,31.276201844572,18.3497300443561,15.6011155367049,9.7738802219614,4.25547396069835,7.19339883343468,18.1582051945847,8.68194568626309,3.29296134712308,36.4824526408983,9.24019066730619,20.5907486962692,35.8712858700907,21.7883364650074,28.5922754780683,18.2435670961786,56.7550513318303,52.7084848707579,10.3038687861381,6.89171615004683,12.8373214536647,27.6532295735076,16.4381058040307,21.3082546255476,42.4802695735468,24.431814265039,17.8970887133399,16.812937752647,14.229298956458,13.0139853857622,7.73288812777695,10.0509759200609,7.65526501983796,32.2073020297288,14.9580729602012,17.4054515643135,8.71109591205893,5.00170521059677,8.13795071099207,14.7659311686873,24.0879134876168,21.762933274683,14.4083940441037,8.12554469264841,4.5481500811197,13.4514992680256,39.8535359121262,8.48098175291834,35.9698163897863,3.52442083432933,6.51972505240626,24.6053951086236,16.6099934630335,17.289864364158,10.0032098577266,11.6504807657348,9.37409909322009,24.0664573584214,20.2569804740242,13.7523446272206,26.3966647466744,17.9097537173346,17.3722234835096,16.325987308949,31.1503581481364,27.3445056982216,52.479252692824,44.6558809097914,36.0252173225874,18.4914957875182,17.2435564460825,44.0147127113584,29.2776842819747,46.979521345733,23.3401458627775,8.12159303233341,34.4258556856734,1.56869953835371,4.38417673959782,21.1103257785751,7.96133688496276,10.885997137697,16.6255255398647,4.62681758070868,4.87703587578935,3.01013864312912,21.6644832088283,11.6350641250021,8.73111543416495,25.2148858142825,23.529190592241,19.746659633962,11.4805125994897,16.2689197332152,48.4292754744295,35.2542439550622,45.7102629560057,13.7823729119081,18.8517471350591,36.9573038641567,9.37705967433583,21.1046605447063,18.2669372924094,22.329524742494,28.251524400356,16.2418697183936,17.1305521106363,14.9573819886519,39.1725249405518,18.4502464670502,9.18811529961006,15.1736671283325,36.7227983944856,16.9998667288546,9.7585217822484,12.0133096268675,6.91997839412128,15.6587938573513,11.1194531462352,24.1881058593965,11.9090678195094,11.7060387145929,17.7286080349157,15.35386747868,15.4058035692211,13.3645364128893,8.63443504219153,29.8588279588302,23.6101845573007,23.0912308597545,8.49166422607927,6.34041284692033,10.5314614059745,3.90106991271672,25.3462029216536,9.50851320810799,29.8934805983489,10.4640019645747,6.78048699721457,11.0273068709225,18.5762913067542,14.4688792133742,10.9967351510671,7.21484227251296,11.5658914868741,11.7732929277905,14.3664757291443,26.3876888055455,22.1060342279523,15.693526265175,70.597451750049,16.0441802826225,12.5132059324763,6.45104395401716,3.84928192269481,25.4026377595352,5.3624182042863,15.2447378805852,47.4484755914967,9.04061282609583,15.1624328100863,6.65145230305014,20.4453826184194,15.2234282769651,20.6452045928441,5.69647187174163,13.579211201094,20.9794759273959,16.8603060910106,17.8210374288578,6.34500141035416,15.7031384557386,22.1370366710572,51.7034855719977,13.3778286090517,28.2767657433832,12.6632481160177,18.6528739092722,25.9453182862662,25.6617195977371,14.1821300425002,14.9326092526296,15.7246419743537,3.42352018549788,11.9076720787498,5.01268954180134,14.7283846687395,5.29940647842208,9.68638594517028,18.311388220684,18.5492886168113,12.2896305723383,13.1968903656525,11.6794399198336,14.8494952505551,18.374807477086,18.4631098421569,20.5546315641747,22.9819657918496,28.1974010175699,42.1066215918495,13.4787524930142,23.3012201759066,24.7404313096002,5.39858678932185,32.7079944090635,13.3634106374687,26.415820380534,11.9297717731956,20.5377347959349,21.3712713643979,12.6898983154605,1.05562704063997,11.357135330311,16.8533188474,46.8594911008953,68.5200172764437,6.40040988397561,29.8598004155335,32.172869710743,8.95105873378046,10.2314474045374,16.1775185244571,16.7638164642858,35.5638368462838,8.72399471485697,17.5331705525899,3.99227596002388,8.07326059364223,20.9029399990908,8.69999490521752,8.19312827655598,15.7637263181515,20.5657283138105,15.1687084226244,11.0809753085637,8.16037476186474,13.2861207872076,15.677537021303,18.30980835805,21.0100593869327,23.3482618973303,17.3314463751638,46.4077854590898,126.178488572136,12.3120413606075,35.4359793684174,22.1341348212538,28.363415633488,16.9489900198333,8.93203247249374,14.5640173508961,11.1937302963913,18.3947936752326,21.0353543569333,25.9290223764244,46.4727060871392,47.447133304893,60.9192360722309,38.3302540102854,46.8862907992117,18.1458335494103,11.5895293792995,28.8360265725239,11.2522092665887,23.8862863458841,21.0529003517947,34.8287182612167,29.0590706107009,40.2818440965599,48.1385187220149,10.851582409889,15.248975298677,16.6327756464991,1.64209310294099,14.6748464199067,24.7635987124775,14.5996229054275,16.9387002468129,7.03967351750127,27.3597889791353,16.3852527161797,25.5072950837228,9.96980809060778,10.2607506321405,6.27865836814451,7.16834578637753,44.9683082727072,25.6548145074307,50.6794435938582,25.0860537380807,57.8073131693873,21.4913801937697,15.4787429224455,26.6079911044984,24.7772784922169,24.4704062018563,21.4345726439407,34.9494261698341,14.4627674099541,10.9633539717401,25.4354702979827,18.6766848069842,22.2928576317675,48.8968803534356,20.7049404897172,14.5861014994955,15.2735842183352,20.0439043290352,13.3844098332332,52.7240560636628,19.5076480837729,40.303679919472,12.9108995769933,14.8536041763513,41.6152727956193,22.5381460123185,10.2071449080664,23.5477251694228,1.27746588066972,7.30601250413927,35.4897928277075,15.9190968725185,14.6662671367478,10.0502223440754,16.5733570414163,8.58452096273142,12.0512587018611,15.1834647820001,27.7430910327651,8.15471646692177,33.9555515744134,38.9827010142917,39.6332837862607,24.9021528232314,12.3623064816045,18.290282865614,19.6132904800669,26.3635163482631,29.7085183050025,30.3271446761305,31.9462926003131,23.9878605912964,16.7668776376148,32.2017300095295,77.2295931532142,14.8446484422045,11.7216373536541,8.60579228797655,37.8072938719307,15.7232971802141,23.1732189627901,9.15366735557099,45.0689669455582,35.433081139252,78.3809664262582,23.9460383124975,36.0386166089598,26.7509194203112,28.894583337632,63.3105649489316,11.9256200020999,14.091842243409,18.1158664387485,23.6099836280375,11.9818553793834,16.6588363605604,23.8950543751492,20.7119527673598,13.3964825889227,2.37133958277533,34.2237201450318,17.8735552175651,4.35214242695579,5.5151776684994,6.73960268879615,7.5410705063255,30.3114405762952,14.1770908794718,22.2087802121573,21.032076358692,18.3490942620823,21.8530231527599,13.4749194382802,10.0994503503448,17.4972571146949,35.9408408573705,24.2645533513222,8.46956950913418,9.36669811613763,9.41986685970364,36.4181719043973,22.903904365028,43.2748571972038,32.5773169073153,21.1317037472163,22.2452805399134,35.4702106015232,19.3575582416946,41.035420953854,33.5631190476469,31.5407598984131,26.0885805054891,34.4683764265296,45.2029766546532,34.8252646070973,13.5653716071051,38.9167207302796,19.0402606084398,57.3687733818573,22.0036877635097,41.6752961324855,24.5937892735602,14.7295478818488,18.8013049391682,26.7848650042578,16.50072494953,20.1895837165842,15.4095864325843,8.57766365499703,6.7858515910955,29.0183584655709,25.9305171242694,13.9499921568687,15.7598180151709,7.41123473186333,10.9642024789354,14.1351316756705,33.1812145825973,22.3004021662056,16.9119402268045,12.4354923023231,31.6014354424477,18.3883720081802,24.7472592226023,21.6569689710782,17.9921933681429,23.5879091169417,29.7385219592,18.1728426088419,32.7979329202085,22.4052632357696,14.1216283321869,24.4031860033739,15.6490057714065,50.2167432712806,18.0402405409562,6.01103545127163,4.20516764447059,9.27869056949789,5.89732046236875,13.239137336414,1.2754495206101,3.47020139925206,3.35186950783946,17.490239285938,9.4634094001504,16.0114149657094,14.1070377476274,21.7434288920772,14.9011802223786,17.0035891590702,19.6349646640296,14.9734945895751,3.78107544332577,7.7456122759924,13.5639542330755,17.1323304310985,33.0757811348456,38.9300087047543,28.4314327708602,10.2817842873801,18.306340582424,15.1879183733222,13.5263031039067,9.92776334210196,30.0540552368245,21.8823923145266,14.6667748909597,15.0670164109289,23.3612616222931,15.2634941237572,13.2783276764354,19.6352456676125,14.0148940528534,4.37579847214576,25.2198572754304,10.4204347461752,3.34155364283279,17.7589774419037,35.3563211679669,49.7699908883859,15.7811057101524,28.2301117275609,7.89451094447486,9.67965495468546,15.0909448304928,20.3909198930495,11.4444625999357,37.5856414011019,35.4828172035701,14.9921807344482,16.6542525310962,33.0721152710271,9.13158720509496,35.8439801422912,40.6088934703993,18.5839014859306,21.1738239721854,7.20696837282377,6.08503953059028,13.6290932004143,20.0999679238146,8.70664233179145,8.98637560358319,36.5693254997236,23.0747401424602,21.4737779993077,18.2056431582099,26.8055036196539,10.8572234982512,21.977395596481,19.4628451328159,20.2189481247401,29.5041378457092,11.0062902321942,12.2168740158934,3.4794432940146,4.85710993059139,10.995154782719,21.8845852677505,37.8165888672668,13.7794220087531,26.385724018903,20.8328724122009,67.0643433958039,24.6972303369472,39.5066528943679,15.1991959487421,29.4595683877032,17.4714535732301,21.6843872238773,10.566393189585,28.0379739234898,23.4959794949634,9.21747798022154,13.1922325820906,23.9262277731581,16.5860589706375,22.2268585728996,10.2247094354512,20.1840884697998,20.0675416412032,15.6193846571253,7.00312348966421,6.54526035510566,30.6835567498932,35.3395267258414,15.2517957448368,35.4753780941507,29.0182777120682,40.3189960546037,13.5567396082238,20.4997547781383,8.28373956323238,36.9417496130077,16.045282514712,12.1245917149183,12.058385857028,14.0958804707992,18.721372251003,22.389568099603,38.8045023285897,11.4968259508091,16.2015004312189,17.4925705625757,104.317692417912,81.8574615280788,15.6756058485812,9.58253243038787,12.6621859667425,20.0822175099494,9.64715033983439,17.0946864083046,50.9089439836703,30.8915651659104,10.1502478380443,21.1176848163109,17.8472508506985,18.3103280242082,9.32059483859718,11.0700586475064,21.7986574766198 | |||
|short_description=p1@TPMT | |||
}} |
Latest revision as of 01:13, 17 September 2015
Short description: | p1@TPMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TPMT_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000309983_5end |
EntrezGene: | TPMT |
HGNC: | 12014 |
UniProt: | P51580 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.70e-10 | 72 |
macrophage dendritic cell progenitor | 8.24e-10 | 61 |
myeloid lineage restricted progenitor cell | 1.35e-09 | 66 |
monopoietic cell | 2.15e-09 | 59 |
monocyte | 2.15e-09 | 59 |
monoblast | 2.15e-09 | 59 |
promonocyte | 2.15e-09 | 59 |
myeloid cell | 2.51e-09 | 108 |
common myeloid progenitor | 2.51e-09 | 108 |
granulocyte monocyte progenitor cell | 4.70e-09 | 67 |
defensive cell | 5.43e-09 | 48 |
phagocyte | 5.43e-09 | 48 |
intermediate monocyte | 8.99e-07 | 9 |
CD14-positive, CD16-positive monocyte | 8.99e-07 | 9 |
classical monocyte | 9.57e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.57e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
bone element | 6.74e-08 | 82 |
bone marrow | 1.18e-07 | 76 |
skeletal element | 6.68e-07 | 90 |
larynx | 8.32e-07 | 9 |