FFCP PHASE1:Hg19::chr1:2489184..2489208,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8764 | |EntrezGene=8764 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11912 | |HGNC=11912 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-43bp_to_ENST00000466750_5end | |association_with_transcript=-43bp_to_ENST00000466750_5end | ||
|cluster_id=chr1:2489184..2489208,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_14_at_TNFRSF14_5end | |description=CAGE_peak_14_at_TNFRSF14_5end | ||
|id=chr1:2489184..2489208,+ | |id=chr1:2489184..2489208,+ | ||
|ontology_enrichment_celltype=CL:0000738!8.83e-37!140;CL:0000766!4.95e-34!76;CL:0002031!1.90e-33!124;CL:0002087!2.29e-33!119;CL:0000839!2.48e-30!70;CL:0000557!1.21e-29!71;CL:0002194!3.40e-28!63;CL:0000576!3.40e-28!63;CL:0000040!3.40e-28!63;CL:0000559!3.40e-28!63;CL:0000037!1.98e-27!172;CL:0000566!1.98e-27!172;CL:0002009!8.18e-27!65;CL:0002032!3.82e-26!165;CL:0000837!3.82e-26!165;CL:0002057!4.31e-26!42;CL:0000988!4.17e-25!182;CL:0000860!1.80e-23!45;CL:0000763!1.22e-19!112;CL:0000049!1.22e-19!112;CL:0000134!8.77e-07!358;CL:0000838!9.24e-07!52 | |ontology_enrichment_celltype=CL:0000738!8.83e-37!140;CL:0000766!4.95e-34!76;CL:0002031!1.90e-33!124;CL:0002087!2.29e-33!119;CL:0000839!2.48e-30!70;CL:0000557!1.21e-29!71;CL:0002194!3.40e-28!63;CL:0000576!3.40e-28!63;CL:0000040!3.40e-28!63;CL:0000559!3.40e-28!63;CL:0000037!1.98e-27!172;CL:0000566!1.98e-27!172;CL:0002009!8.18e-27!65;CL:0002032!3.82e-26!165;CL:0000837!3.82e-26!165;CL:0002057!4.31e-26!42;CL:0000988!4.17e-25!182;CL:0000860!1.80e-23!45;CL:0000763!1.22e-19!112;CL:0000049!1.22e-19!112;CL:0000134!8.77e-07!358;CL:0000838!9.24e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.24e-18;5!CL:0000860;6.95e-13;33!CL:0002057;6.95e-13;33!CL:0000473;1.20e-12;39!CL:0000234;1.20e-12;39!CL:0000766;5.51e-11;69!CL:0000163;2.12e-10;9!CL:0000576;2.19e-09;48!CL:0000148;4.73e-09;10!CL:0002619;2.15e-08;3!CL:0002567;2.40e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.50e-23,72;CL:0000839,9.97e-23,66;CL:0000557,2.46e-22,67;CL:0000097,1.05e-18,5;CL:0002028,1.05e-18,5;CL:0000763,6.66e-16,108;CL:0000049,6.66e-16,108;CL:0002194,6.97e-15,59;CL:0000576,6.97e-15,59;CL:0000040,6.97e-15,59;CL:0000559,6.97e-15,59;CL:0002009,2.61e-14,61;CL:0000473,7.08e-14,48;CL:0000234,7.08e-14,48;CL:0002031,3.19e-12,120;CL:0000738,1.06e-11,136;CL:0000860,3.82e-11,42;CL:0002057,3.82e-11,42;CL:0000163,1.93e-10,9;CL:0002032,2.06e-10,161;CL:0000837,2.06e-10,161;CL:0000037,8.53e-10,168;CL:0000148,4.28e-09,10;CL:0000541,4.28e-09,10;CL:0000988,4.48e-09,177;CL:0002619,1.36e-08,3;CL:0002567,1.64e-08,3;CL:0002087,2.20e-07,115;CL:0000511,5.57e-07,1;CL:0002625,5.57e-07,1;CL:0000216,5.57e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;3.29e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.01e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,9.57e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.82e-25!102;UBERON:0003061!4.82e-25!102;UBERON:0002371!2.86e-24!80;UBERON:0002193!8.78e-24!112;UBERON:0001474!2.41e-21!86;UBERON:0002405!6.58e-20!115;UBERON:0004765!2.04e-17!101;UBERON:0001434!2.04e-17!101;UBERON:0002204!7.65e-09!167;UBERON:0003081!1.07e-08!216 | |ontology_enrichment_uberon=UBERON:0002390!4.82e-25!102;UBERON:0003061!4.82e-25!102;UBERON:0002371!2.86e-24!80;UBERON:0002193!8.78e-24!112;UBERON:0001474!2.41e-21!86;UBERON:0002405!6.58e-20!115;UBERON:0004765!2.04e-17!101;UBERON:0001434!2.04e-17!101;UBERON:0002204!7.65e-09!167;UBERON:0003081!1.07e-08!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.92e-19,76;UBERON:0001474,1.39e-17,82;UBERON:0004765,1.09e-15,90;UBERON:0002405,4.59e-15,93;UBERON:0002390,4.17e-14,98;UBERON:0003061,4.17e-14,98;UBERON:0001434,9.49e-14,100;UBERON:0002193,1.87e-12,108;UBERON:0001136,5.57e-07,1;UBERON:0001343,5.57e-07,1;UBERON:0004910,5.57e-07,1;UBERON:0005154,5.57e-07,1;UBERON:0005295,5.57e-07,1;UBERON:0004813,5.57e-07,1;UBERON:0005297,5.57e-07,1;UBERON:0005294,5.57e-07,1;UBERON:0010141,5.57e-07,1;UBERON:0005891,5.57e-07,1;UBERON:0002204,9.33e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.786728553697808,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0.200544447470142,0.434021741431704,3.35873211359887,1.6194683300949,0.515151135268373,0.581592955118259,0.377875943688809,0.485168122375632,0.232429036905685,0.411167888021826,1.54853185447552,0.28769239232215,0.768482119587302,0.709446689665756,1.37898272294647,1.29096936716765,0,0.941211697713023,1.36453075028923,1.12361742222542,1.22433556948361,2.24650318953266,1.27867425159808,0.329851300186716,0.199463657621632,0.852449501065388,0,0.56738522469114,0,0.75374599577023,1.5644487552606,0.217188844705117,0,1.10483290796269,0,0.211255286311942,0.425208599930087,0.419317291016752,0.112328631146495,0.450530678524519,0.32145117339416,0.285012743741249,0.39783335439818,0.91332076882317,0,0.546138611262131,0,0,0.800791974072025,0.574752439954483,0,0,0,0.587237189370939,0.764546456250458,0,0,0,0.393419540227666,0,0.205601498999509,0.334372990781356,0.32592226663359,0,3.89653456815823,0.222820913770347,0,0,0.270803863765016,0.512365278902701,0.780356085359269,0.657751618414705,0,0.869409257205157,0.14828656316206,0,1.04535523804977,0,0,0.34362744548263,0.759059076058509,0,0,0,0.150575119077773,0.511946444617674,0,0.236777252044017,0.821127996921047,0.403213486449465,0.267440195783507,0.724122019413995,0,0,0,0,0,0.434539556882471,0,0,0,0,0,0,0,0,0,0.522389211897802,0.26591592103773,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0.805658634218294,0,1.22031028774085,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.702012795417713,0.148631162288728,0,0,0,0,0,0,0,1.32072651019839,4.14656231081544,9.07955706526857,9.84690980725764,0.126995788584338,1.52795370223311,2.34434894420094,0,0.719792448923265,2.10240140490742,1.14330573052231,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0,0,0,0.749007023947182,5.9832291840805,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0.206768026122887,0.215714200818617,0.320182673410333,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0.182091168006717,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,1.6068392984416,0,0.154048617114644,0,0,0,0,0.170453254832202,0,0,0,0,0.30347334256665,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0.507447609232169,0,0.569647187174163,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0.293016358543788,0,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0,0,1.10513566212459,0,0,0.369254416383208,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,1.02193298195737,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,1.06149077404007,1.22206028986725,0,0,0,0,0,0.234264445725339,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,0,0.0801588202515337,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640724475406168,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36484205787483,1.14186133417987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0,0,0.470958557103084,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.771741581079447,0.218559560503957,0,0,0,0.196308467114945,0,0.4226557275834,0,0.563903507879121,0.322289439867886,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.426467963801962,0,0.516711278688049,0.124149428591716,0,0.0636471582781649,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0.805095174364105,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.786728553697808,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0.200544447470142,0.434021741431704,3.35873211359887,1.6194683300949,0.515151135268373,0.581592955118259,0.377875943688809,0.485168122375632,0.232429036905685,0.411167888021826,1.54853185447552,0.28769239232215,0.768482119587302,0.709446689665756,1.37898272294647,1.29096936716765,0,0.941211697713023,1.36453075028923,1.12361742222542,1.22433556948361,2.24650318953266,1.27867425159808,0.329851300186716,0.199463657621632,0.852449501065388,0,0.56738522469114,0,0.75374599577023,1.5644487552606,0.217188844705117,0,1.10483290796269,0,0.211255286311942,0.425208599930087,0.419317291016752,0.112328631146495,0.450530678524519,0.32145117339416,0.285012743741249,0.39783335439818,0.91332076882317,0,0.546138611262131,0,0,0.800791974072025,0.574752439954483,0,0,0,0.587237189370939,0.764546456250458,0,0,0,0.393419540227666,0,0.205601498999509,0.334372990781356,0.32592226663359,0,3.89653456815823,0.222820913770347,0,0,0.270803863765016,0.512365278902701,0.780356085359269,0.657751618414705,0,0.869409257205157,0.14828656316206,0,1.04535523804977,0,0,0.34362744548263,0.759059076058509,0,0,0,0.150575119077773,0.511946444617674,0,0.236777252044017,0.821127996921047,0.403213486449465,0.267440195783507,0.724122019413995,0,0,0,0,0,0.434539556882471,0,0,0,0,0,0,0,0,0,0.522389211897802,0.26591592103773,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0.805658634218294,0,1.22031028774085,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.702012795417713,0.148631162288728,0,0,0,0,0,0,0,1.32072651019839,4.14656231081544,9.07955706526857,9.84690980725764,0.126995788584338,1.52795370223311,2.34434894420094,0,0.719792448923265,2.10240140490742,1.14330573052231,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0,0,0,0.749007023947182,5.9832291840805,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0.206768026122887,0.215714200818617,0.320182673410333,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0.182091168006717,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,1.6068392984416,0,0.154048617114644,0,0,0,0,0.170453254832202,0,0,0,0,0.30347334256665,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0.507447609232169,0,0.569647187174163,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0.293016358543788,0,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0,0,1.10513566212459,0,0,0.369254416383208,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,1.02193298195737,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,1.06149077404007,1.22206028986725,0,0,0,0,0,0.234264445725339,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,0,0.0801588202515337,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640724475406168,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36484205787483,1.14186133417987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0,0,0.470958557103084,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.771741581079447,0.218559560503957,0,0,0,0.196308467114945,0,0.4226557275834,0,0.563903507879121,0.322289439867886,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.426467963801962,0,0.516711278688049,0.124149428591716,0,0.0636471582781649,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0.805095174364105,0.320568492303233 | ||
|short_description=p14@TNFRSF14 | |short_description=p14@TNFRSF14 | ||
}} | }} |
Latest revision as of 01:13, 17 September 2015
Short description: | p14@TNFRSF14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_TNFRSF14_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -43bp_to_ENST00000466750_5end |
EntrezGene: | TNFRSF14 |
HGNC: | 11912 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.92e-19 | 76 |
bone element | 1.39e-17 | 82 |
skeletal element | 1.09e-15 | 90 |
immune system | 4.59e-15 | 93 |
hematopoietic system | 4.17e-14 | 98 |
blood island | 4.17e-14 | 98 |
skeletal system | 9.49e-14 | 100 |
hemolymphoid system | 1.87e-12 | 108 |
mesothelium | 5.57e-07 | 1 |
seminiferous tubule of testis | 5.57e-07 | 1 |
epithelium of male gonad | 5.57e-07 | 1 |
epithelial cord | 5.57e-07 | 1 |
sex cord | 5.57e-07 | 1 |
seminiferous tubule epithelium | 5.57e-07 | 1 |
testis sex cord | 5.57e-07 | 1 |
genital ridge | 5.57e-07 | 1 |
primitive sex cord of indifferent gonad | 5.57e-07 | 1 |
coelomic epithelium | 5.57e-07 | 1 |
musculoskeletal system | 9.33e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
melanoma | 9.57e-12 | 2 |