FFCP PHASE1:Hg19::chr1:2489047..2489054,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8764 | |EntrezGene=8764 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11912 | |HGNC=11912 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-197bp_to_ENST00000466750_5end | |association_with_transcript=-197bp_to_ENST00000466750_5end | ||
|cluster_id=chr1:2489047..2489054,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_24_at_TNFRSF14_5end | |description=CAGE_peak_24_at_TNFRSF14_5end | ||
|id=chr1:2489047..2489054,+ | |id=chr1:2489047..2489054,+ | ||
|ontology_enrichment_celltype=CL:0000148!8.61e-48!10;CL:0000541!8.61e-48!10;CL:0000147!4.75e-46!14;CL:0000710!7.73e-24!20;CL:0002567!8.69e-19!3;CL:0000075!1.32e-17!27;CL:0000325!2.88e-16!39;CL:0002566!1.23e-14!1;CL:0002077!2.33e-14!33;CL:0000149!2.95e-14!4;CL:0000333!5.96e-11!41;CL:0000133!1.28e-07!59 | |ontology_enrichment_celltype=CL:0000148!8.61e-48!10;CL:0000541!8.61e-48!10;CL:0000147!4.75e-46!14;CL:0000710!7.73e-24!20;CL:0002567!8.69e-19!3;CL:0000075!1.32e-17!27;CL:0000325!2.88e-16!39;CL:0002566!1.23e-14!1;CL:0002077!2.33e-14!33;CL:0000149!2.95e-14!4;CL:0000333!5.96e-11!41;CL:0000133!1.28e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000148;4.52e-70;10!CL:0000147;2.96e-50;14!CL:0002567;4.67e-38;3!CL:0000710;2.28e-35;20!CL:0000075;2.40e-26;27!CL:0002077;7.83e-20;34!CL:0000149;2.18e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.21e-70,10;CL:0000541,4.21e-70,10;CL:0000147,2.82e-50,14;CL:0002567,4.67e-38,3;CL:0000710,2.20e-35,20;CL:0000075,2.34e-26,27;CL:0002077,4.92e-21,34;CL:0000333,1.00e-16,41;CL:0000133,6.66e-12,59;CL:0000221,7.22e-10,72;CL:0000149,2.26e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000133;5.08e-07;59 | |||
|ontology_enrichment_disease=DOID:1909!3.60e-28!2;DOID:3493!7.52e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.31e-57;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.51e-57,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.29e-08;15!UBERON:0007376;1.29e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.31e-08,15;UBERON:0007376,1.31e-08,15;UBERON:0007383,1.31e-08,15 | |||
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|short_description=p24@TNFRSF14 | |short_description=p24@TNFRSF14 | ||
}} | }} |
Latest revision as of 01:12, 17 September 2015
Short description: | p24@TNFRSF14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_TNFRSF14_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -197bp_to_ENST00000466750_5end |
EntrezGene: | TNFRSF14 |
HGNC: | 11912 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.21e-70 | 10 |
melanoblast | 4.21e-70 | 10 |
pigment cell | 2.82e-50 | 14 |
light melanocyte | 4.67e-38 | 3 |
neurecto-epithelial cell | 2.20e-35 | 20 |
columnar/cuboidal epithelial cell | 2.34e-26 | 27 |
ecto-epithelial cell | 4.92e-21 | 34 |
migratory neural crest cell | 1.00e-16 | 41 |
neurectodermal cell | 6.66e-12 | 59 |
ectodermal cell | 7.22e-10 | 72 |
visual pigment cell | 2.26e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.31e-08 | 15 |
outer epithelium | 1.31e-08 | 15 |
enveloping layer of ectoderm | 1.31e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.51e-57 | 2 |